RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 TEX43Q6ZNM6 134 aa8.61□□□□□ -1.03
SRGAP2C-204ENST00000613462 CHCHD10Q8WYQ3 142 aaPredicted RBP8.61□□□□□ -1.03
SRGAP2C-204ENST00000613462 PKD1P98161 4303 aa8.61□□□□□ -1.03
SRGAP2C-204ENST00000613462 A0A1B0GVY2 172 aa8.6□□□□□ -1.03
SRGAP2C-204ENST00000613462 LRCOL1A6NCL2 159 aa8.6□□□□□ -1.03
SRGAP2C-204ENST00000613462 IFITM10A6NMD0 228 aa8.6□□□□□ -1.03
SRGAP2C-204ENST00000613462 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
SRGAP2C-204ENST00000613462 C14orf177Q52M58 125 aa8.6□□□□□ -1.03
SRGAP2C-204ENST00000613462 KRTAP26-1Q6PEX3 210 aa8.6□□□□□ -1.03
SRGAP2C-204ENST00000613462 BAALCQ8WXS3 180 aa8.6□□□□□ -1.03
SRGAP2C-204ENST00000613462 SYS1-DBNDD2H3BUS1 97 aa8.59□□□□□ -1.03
SRGAP2C-204ENST00000613462 PMVKQ15126 192 aa8.59□□□□□ -1.03
SRGAP2C-204ENST00000613462 RNASE13Q5GAN3 156 aaKnown RBP8.59□□□□□ -1.03
SRGAP2C-204ENST00000613462 PET117Q6UWS5 81 aa8.59□□□□□ -1.03
SRGAP2C-204ENST00000613462 MAPKAPK5-AS1Q8N8E1 139 aa8.59□□□□□ -1.03
SRGAP2C-204ENST00000613462 FAM104AQ969W3 186 aa8.59□□□□□ -1.03
SRGAP2C-204ENST00000613462 OPRPNQ99935 248 aaPredicted RBP8.59□□□□□ -1.03
SRGAP2C-204ENST00000613462 DNAH11Q96DT5 4516 aa8.59□□□□□ -1.03
SRGAP2C-204ENST00000613462 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
SRGAP2C-204ENST00000613462 GAGE12HA6NDE8 117 aa8.58□□□□□ -1.04
SRGAP2C-204ENST00000613462 XCL1P47992 114 aa8.58□□□□□ -1.04
SRGAP2C-204ENST00000613462 CDPF1Q6NVV7 123 aa8.58□□□□□ -1.04
SRGAP2C-204ENST00000613462 CD164L2Q6UWJ8 174 aa8.58□□□□□ -1.04
SRGAP2C-204ENST00000613462 AMELXQ99217 191 aa8.58□□□□□ -1.04
SRGAP2C-204ENST00000613462 TRAV12-1A0A0B4J245 112 aa8.57□□□□□ -1.04
SRGAP2C-204ENST00000613462 CFAP161Q6P656 301 aa8.57□□□□□ -1.04
SRGAP2C-204ENST00000613462 Q8N814 137 aa8.57□□□□□ -1.04
SRGAP2C-204ENST00000613462 NTN5Q8WTR8 489 aaPredicted RBP8.57□□□□□ -1.04
SRGAP2C-204ENST00000613462 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
SRGAP2C-204ENST00000613462 HSPG2P98160 4391 aa8.57□□□□□ -1.04
SRGAP2C-204ENST00000613462 SCGB1D1O95968 90 aa8.56□□□□□ -1.04
SRGAP2C-204ENST00000613462 FOXI1Q12951 378 aa8.56□□□□□ -1.04
SRGAP2C-204ENST00000613462 ZC2HC1BQ5TFG8 222 aa8.56□□□□□ -1.04
SRGAP2C-204ENST00000613462 CST9LQ9H4G1 147 aa8.56□□□□□ -1.04
SRGAP2C-204ENST00000613462 PGPEP1Q9NXJ5 209 aa8.56□□□□□ -1.04
SRGAP2C-204ENST00000613462 USP17L23D6RBM5 183 aa8.55□□□□□ -1.04
SRGAP2C-204ENST00000613462 LECT2O14960 151 aa8.55□□□□□ -1.04
SRGAP2C-204ENST00000613462 SEC11AP67812 179 aa8.55□□□□□ -1.04
SRGAP2C-204ENST00000613462 SPATA12Q7Z6I5 190 aa8.55□□□□□ -1.04
SRGAP2C-204ENST00000613462 LOC105371267A0A1B0GV96 52 aa8.54□□□□□ -1.04
SRGAP2C-204ENST00000613462 F8VRH5 84 aa8.54□□□□□ -1.04
SRGAP2C-204ENST00000613462 COX7A2LO14548 114 aa8.54□□□□□ -1.04
SRGAP2C-204ENST00000613462 DPM2O94777 84 aa8.54□□□□□ -1.04
SRGAP2C-204ENST00000613462 UBE2D1P51668 147 aa8.54□□□□□ -1.04
SRGAP2C-204ENST00000613462 ODF1Q14990 250 aa8.54□□□□□ -1.04
SRGAP2C-204ENST00000613462 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
SRGAP2C-204ENST00000613462 PLNP26678 52 aa8.53□□□□□ -1.04
SRGAP2C-204ENST00000613462 WFDC2Q14508 124 aa8.53□□□□□ -1.04
SRGAP2C-204ENST00000613462 LINC01545Q5VT33 79 aa8.53□□□□□ -1.04
SRGAP2C-204ENST00000613462 FAM19A3Q7Z5A8 133 aa8.53□□□□□ -1.04
SRGAP2C-204ENST00000613462 PMCHL2Q9BQD1 86 aa8.53□□□□□ -1.04
SRGAP2C-204ENST00000613462 MRPL35Q9NZE8 188 aaKnown RBP8.53□□□□□ -1.04
SRGAP2C-204ENST00000613462 IGHV3OR16-9A0A0B4J2B5 98 aa8.52□□□□□ -1.05
SRGAP2C-204ENST00000613462 IGHV1-58A0A0C4DH39 117 aa8.52□□□□□ -1.05
SRGAP2C-204ENST00000613462 APOMO95445 188 aa8.52□□□□□ -1.05
SRGAP2C-204ENST00000613462 IGKCP01834 107 aa8.52□□□□□ -1.05
SRGAP2C-204ENST00000613462 MALP21145 153 aa8.52□□□□□ -1.05
SRGAP2C-204ENST00000613462 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
SRGAP2C-204ENST00000613462 HERVK_113P63121 156 aa8.52□□□□□ -1.05
SRGAP2C-204ENST00000613462 LINC00242Q5T6M2 205 aa8.52□□□□□ -1.05
SRGAP2C-204ENST00000613462 CHAC1Q9BUX1 264 aa8.52□□□□□ -1.05
SRGAP2C-204ENST00000613462 GVQW2A0A096LPI5 108 aaPredicted RBP8.51□□□□□ -1.05
SRGAP2C-204ENST00000613462 IGLV5-52A0A0A0MRZ9 124 aa8.51□□□□□ -1.05
SRGAP2C-204ENST00000613462 A0A0J9YXV3 536 aa8.51□□□□□ -1.05
SRGAP2C-204ENST00000613462 hDV102S1A0JD36 115 aa8.51□□□□□ -1.05
SRGAP2C-204ENST00000613462 JOSD1Q15040 202 aaPredicted RBP8.51□□□□□ -1.05
SRGAP2C-204ENST00000613462 C15orf56Q8N910 161 aa8.51□□□□□ -1.05
SRGAP2C-204ENST00000613462 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
SRGAP2C-204ENST00000613462 C16orf90A8MZG2 172 aa8.5□□□□□ -1.05
SRGAP2C-204ENST00000613462 HSBP1L1C9JCN9 74 aa8.5□□□□□ -1.05
SRGAP2C-204ENST00000613462 IGLC3P0DOY3 106 aa8.5□□□□□ -1.05
SRGAP2C-204ENST00000613462 LINC00469Q8N7U9 141 aa8.5□□□□□ -1.05
SRGAP2C-204ENST00000613462 HERC1Q15751 4861 aa8.5□□□□□ -1.05
SRGAP2C-204ENST00000613462 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.49□□□□□ -1.05
SRGAP2C-204ENST00000613462 A0A087WZ39 114 aa8.49□□□□□ -1.05
SRGAP2C-204ENST00000613462 H3BRM9 83 aa8.49□□□□□ -1.05
SRGAP2C-204ENST00000613462 HERVK_113P61574 105 aa8.49□□□□□ -1.05
SRGAP2C-204ENST00000613462 TMEM170BQ5T4T1 132 aa8.49□□□□□ -1.05
SRGAP2C-204ENST00000613462 ATOH7Q8N100 152 aa8.49□□□□□ -1.05
SRGAP2C-204ENST00000613462 LINC01561Q8N1V8 128 aa8.49□□□□□ -1.05
SRGAP2C-204ENST00000613462 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
SRGAP2C-204ENST00000613462 IGLV4-69A0A075B6H9 119 aa8.48□□□□□ -1.05
SRGAP2C-204ENST00000613462 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.48□□□□□ -1.05
SRGAP2C-204ENST00000613462 C11orf86A6NJI1 115 aa8.48□□□□□ -1.05
SRGAP2C-204ENST00000613462 CNBPP62633 177 aaKnown RBP8.48□□□□□ -1.05
SRGAP2C-204ENST00000613462 C5orf38Q86SI9 138 aa8.48□□□□□ -1.05
SRGAP2C-204ENST00000613462 ZNF561-AS1K7EIQ3 104 aa8.47□□□□□ -1.05
SRGAP2C-204ENST00000613462 SMIM6P0DI80 62 aa8.47□□□□□ -1.05
SRGAP2C-204ENST00000613462 GCSHP23434 173 aa8.47□□□□□ -1.05
SRGAP2C-204ENST00000613462 PYY3Q5JQD4 70 aa8.47□□□□□ -1.05
SRGAP2C-204ENST00000613462 IGHV3-64A0A075B6Q5 118 aa8.46□□□□□ -1.06
SRGAP2C-204ENST00000613462 IGLV5-45A0A087WSX0 123 aa8.46□□□□□ -1.06
SRGAP2C-204ENST00000613462 ZNF22P17026 224 aaPredicted RBP8.46□□□□□ -1.06
SRGAP2C-204ENST00000613462 S100A12P80511 92 aa8.46□□□□□ -1.06
SRGAP2C-204ENST00000613462 COX6A2Q02221 97 aa8.46□□□□□ -1.06
SRGAP2C-204ENST00000613462 HIGD2BQ4VC39 106 aa8.46□□□□□ -1.06
SRGAP2C-204ENST00000613462 VAMP8Q9BV40 100 aa8.46□□□□□ -1.06
SRGAP2C-204ENST00000613462 F8WDY8 70 aa8.45□□□□□ -1.06
SRGAP2C-204ENST00000613462 ORAOV1Q8WV07 137 aa8.45□□□□□ -1.06
SRGAP2C-204ENST00000613462 CDKN2A-AS1Q9UH64 79 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms