RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 SPANXCQ9NY87 97 aa9.95□□□□□ -0.82
HPS1-215ENST00000613394 DEFB113Q30KQ7 82 aa9.95□□□□□ -0.82
HPS1-215ENST00000613394 LST1O00453 97 aa9.94□□□□□ -0.82
HPS1-215ENST00000613394 NDUFA1O15239 70 aa9.94□□□□□ -0.82
HPS1-215ENST00000613394 ATP5G1P05496 136 aa9.94□□□□□ -0.82
HPS1-215ENST00000613394 SND1-IT1Q9HBX3 110 aa9.94□□□□□ -0.82
HPS1-215ENST00000613394 CCDC179H3BU77 68 aa9.94□□□□□ -0.82
HPS1-215ENST00000613394 PF4P02776 101 aa9.93□□□□□ -0.82
HPS1-215ENST00000613394 BBC3Q96PG8 261 aaPredicted RBP9.93□□□□□ -0.82
HPS1-215ENST00000613394 C1orf158Q8N1D5 194 aa9.93□□□□□ -0.82
HPS1-215ENST00000613394 LITAFQ99732 161 aa9.93□□□□□ -0.82
HPS1-215ENST00000613394 FAM236AA0A1B0GUQ0 79 aa9.92□□□□□ -0.82
HPS1-215ENST00000613394 FAM236BA0A1B0GV22 79 aa9.92□□□□□ -0.82
HPS1-215ENST00000613394 DAZ2Q13117 558 aaKnown RBP9.92□□□□□ -0.82
HPS1-215ENST00000613394 DAZ4Q86SG3 579 aaKnown RBP9.92□□□□□ -0.82
HPS1-215ENST00000613394 Q8N2B8 174 aa9.92□□□□□ -0.82
HPS1-215ENST00000613394 C11orf72Q8NBR9 251 aa9.92□□□□□ -0.82
HPS1-215ENST00000613394 WFDC11Q8NEX6 87 aa9.92□□□□□ -0.82
HPS1-215ENST00000613394 DAZ3Q9NR90 486 aaKnown RBP9.92□□□□□ -0.82
HPS1-215ENST00000613394 HELZ2Q9BYK8 2649 aaKnown RBP9.92□□□□□ -0.82
HPS1-215ENST00000613394 TIRAPP58753 221 aa9.92□□□□□ -0.82
HPS1-215ENST00000613394 SMIM1B2RUZ4 78 aa9.91□□□□□ -0.82
HPS1-215ENST00000613394 SBSPONQ8IVN8 264 aa9.91□□□□□ -0.82
HPS1-215ENST00000613394 RNF152Q8N8N0 203 aa9.91□□□□□ -0.82
HPS1-215ENST00000613394 DNAJC9-AS1A6NH13 148 aa9.91□□□□□ -0.82
HPS1-215ENST00000613394 COX7A2LO14548 114 aa9.91□□□□□ -0.82
HPS1-215ENST00000613394 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
HPS1-215ENST00000613394 IGLV10-54A0A075B6I4 117 aa9.9□□□□□ -0.82
HPS1-215ENST00000613394 DEFB4AO15263 64 aa9.9□□□□□ -0.82
HPS1-215ENST00000613394 CSMD2Q7Z408 3487 aa9.9□□□□□ -0.82
HPS1-215ENST00000613394 SMIM20Q8N5G0 67 aa9.89□□□□□ -0.83
HPS1-215ENST00000613394 ZFHX3Q15911 3703 aa9.89□□□□□ -0.83
HPS1-215ENST00000613394 NTM-AS1Q6ZSK4 140 aa9.89□□□□□ -0.83
HPS1-215ENST00000613394 SLPIP03973 132 aa9.88□□□□□ -0.83
HPS1-215ENST00000613394 CDC42SE2Q9NRR3 84 aa9.88□□□□□ -0.83
HPS1-215ENST00000613394 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
HPS1-215ENST00000613394 SOSTDC1Q6X4U4 206 aa9.87□□□□□ -0.83
HPS1-215ENST00000613394 LECT2O14960 151 aa9.87□□□□□ -0.83
HPS1-215ENST00000613394 TRBV10-1A0A0K0K1A3 114 aa9.87□□□□□ -0.83
HPS1-215ENST00000613394 IGKV3D-7A0A0C4DH55 119 aa9.86□□□□□ -0.83
HPS1-215ENST00000613394 HERV-K104P63124 156 aa9.86□□□□□ -0.83
HPS1-215ENST00000613394 FAM104AQ969W3 186 aa9.86□□□□□ -0.83
HPS1-215ENST00000613394 GYPEP15421 78 aa9.86□□□□□ -0.83
HPS1-215ENST00000613394 MALP21145 153 aa9.86□□□□□ -0.83
HPS1-215ENST00000613394 VPS13CQ709C8 3753 aa9.86□□□□□ -0.83
HPS1-215ENST00000613394 C14orf132Q9NPU4 83 aa9.86□□□□□ -0.83
HPS1-215ENST00000613394 CFAP161Q6P656 301 aa9.85□□□□□ -0.83
HPS1-215ENST00000613394 TMEM86BQ8N661 226 aa9.85□□□□□ -0.83
HPS1-215ENST00000613394 FLNBO75369 2602 aaKnown RBP9.85□□□□□ -0.83
HPS1-215ENST00000613394 BEAN1Q3B7T3 259 aa9.85□□□□□ -0.83
HPS1-215ENST00000613394 IGLV4-60A0A075B6I1 120 aa9.85□□□□□ -0.83
HPS1-215ENST00000613394 TIMM17BO60830 172 aa9.85□□□□□ -0.83
HPS1-215ENST00000613394 HIST1H4AP62805 103 aaKnown RBP9.85□□□□□ -0.83
HPS1-215ENST00000613394 EDA2RQ9HAV5 297 aa9.85□□□□□ -0.83
HPS1-215ENST00000613394 C9orf153Q5TBE3 101 aa9.84□□□□□ -0.83
HPS1-215ENST00000613394 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
HPS1-215ENST00000613394 INAFM2P0DMQ5 153 aa9.84□□□□□ -0.83
HPS1-215ENST00000613394 CITED1Q99966 193 aa9.84□□□□□ -0.83
HPS1-215ENST00000613394 SS18Q15532 418 aa9.83□□□□□ -0.84
HPS1-215ENST00000613394 NIPBLQ6KC79 2804 aaeCLIP9.82□□□□□ -0.84
HPS1-215ENST00000613394 ZNF843Q8N446 348 aa9.82□□□□□ -0.84
HPS1-215ENST00000613394 TRAV25A0A0B4J276 109 aa9.81□□□□□ -0.84
HPS1-215ENST00000613394 ANGP03950 147 aaKnown RBP9.81□□□□□ -0.84
HPS1-215ENST00000613394 FAM218AQ96MZ4 157 aa9.81□□□□□ -0.84
HPS1-215ENST00000613394 ATRQ13535 2644 aa9.81□□□□□ -0.84
HPS1-215ENST00000613394 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
HPS1-215ENST00000613394 S100A7L2Q5SY68 101 aa9.8□□□□□ -0.84
HPS1-215ENST00000613394 SDIM1Q6ZPB5 146 aa9.8□□□□□ -0.84
HPS1-215ENST00000613394 SMIM11BQ8TCY0 68 aa9.8□□□□□ -0.84
HPS1-215ENST00000613394 TRBV6-8A0A0A6YYG3 113 aa9.8□□□□□ -0.84
HPS1-215ENST00000613394 NCR3O14931 201 aa9.8□□□□□ -0.84
HPS1-215ENST00000613394 CCL18P55774 89 aa9.8□□□□□ -0.84
HPS1-215ENST00000613394 SETXQ7Z333 2677 aaKnown RBP9.79□□□□□ -0.84
HPS1-215ENST00000613394 PRR3P79522 188 aaKnown RBP9.79□□□□□ -0.84
HPS1-215ENST00000613394 LINC00337Q8N6G1 96 aa9.79□□□□□ -0.84
HPS1-215ENST00000613394 LINC01006Q8NI28 216 aa9.79□□□□□ -0.84
HPS1-215ENST00000613394 LINC00526Q96FQ7 95 aa9.78□□□□□ -0.84
HPS1-215ENST00000613394 NHLRC4P0CG21 123 aaPredicted RBP9.78□□□□□ -0.84
HPS1-215ENST00000613394 CMC4P56277 68 aaPredicted RBP9.78□□□□□ -0.84
HPS1-215ENST00000613394 ITPR2Q14571 2701 aa9.78□□□□□ -0.84
HPS1-215ENST00000613394 A0A087WYN8 130 aa9.78□□□□□ -0.84
HPS1-215ENST00000613394 ACYP1P07311 99 aa9.78□□□□□ -0.84
HPS1-215ENST00000613394 A0A096LNT2 108 aa9.77□□□□□ -0.85
HPS1-215ENST00000613394 TRACP01848 142 aa9.77□□□□□ -0.85
HPS1-215ENST00000613394 LINC00482Q8N8I6 264 aa9.77□□□□□ -0.85
HPS1-215ENST00000613394 F5H768 121 aa9.77□□□□□ -0.85
HPS1-215ENST00000613394 LINC00643Q86TS7 51 aa9.77□□□□□ -0.85
HPS1-215ENST00000613394 IGLV5-45A0A087WSX0 123 aa9.76□□□□□ -0.85
HPS1-215ENST00000613394 M0QXV9 152 aa9.76□□□□□ -0.85
HPS1-215ENST00000613394 DEFB135Q30KP9 77 aa9.76□□□□□ -0.85
HPS1-215ENST00000613394 LINC00269Q8N2A0 174 aa9.75□□□□□ -0.85
HPS1-215ENST00000613394 TRBV6-4A0A1B0GX49 114 aa9.75□□□□□ -0.85
HPS1-215ENST00000613394 LAMTOR3Q9UHA4 124 aa9.74□□□□□ -0.85
HPS1-215ENST00000613394 OVOL2Q9BRP0 275 aa9.74□□□□□ -0.85
HPS1-215ENST00000613394 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
HPS1-215ENST00000613394 H0YGX0 51 aa9.73□□□□□ -0.85
HPS1-215ENST00000613394 C9orf116Q5BN46 136 aaPredicted RBP9.73□□□□□ -0.85
HPS1-215ENST00000613394 ORMDL1Q9P0S3 153 aa9.73□□□□□ -0.85
HPS1-215ENST00000613394 CSDC2Q9Y534 153 aaKnown RBP9.73□□□□□ -0.85
HPS1-215ENST00000613394 FSHBP01225 129 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms