RNA–Protein interactions for RNA: ENST00000612779.1

HOXA2-202, Transcript of homeobox A2, humanhuman

Gene HOXA2, Length 1,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-202ENST00000612779 VCX2Q9H322 139 aa13.19□□□□□ -0.3
HOXA2-202ENST00000612779 HUWE1Q7Z6Z7 4374 aaKnown RBP13.18□□□□□ -0.3
HOXA2-202ENST00000612779 MYMXA0A1B0GTQ4 84 aa13.18□□□□□ -0.3
HOXA2-202ENST00000612779 H7C423 109 aa13.18□□□□□ -0.3
HOXA2-202ENST00000612779 NANOS2P60321 138 aaKnown RBP13.18□□□□□ -0.3
HOXA2-202ENST00000612779 Q6ZUT4 128 aa13.18□□□□□ -0.3
HOXA2-202ENST00000612779 A0A096LPF7 62 aa13.18□□□□□ -0.3
HOXA2-202ENST00000612779 RNASE13Q5GAN3 156 aaKnown RBP13.17□□□□□ -0.3
HOXA2-202ENST00000612779 MRPL23Q16540 153 aaKnown RBP13.16□□□□□ -0.3
HOXA2-202ENST00000612779 C11orf86A6NJI1 115 aa13.16□□□□□ -0.3
HOXA2-202ENST00000612779 H3BNG1 76 aa13.16□□□□□ -0.3
HOXA2-202ENST00000612779 ICOSQ9Y6W8 199 aa13.16□□□□□ -0.3
HOXA2-202ENST00000612779 NFE4Q86UQ8 179 aa13.15□□□□□ -0.3
HOXA2-202ENST00000612779 B9D2Q9BPU9 175 aa13.15□□□□□ -0.3
HOXA2-202ENST00000612779 UBE2L6O14933 153 aa13.14□□□□□ -0.31
HOXA2-202ENST00000612779 DGAT2L7PQ6IED9 249 aa13.14□□□□□ -0.31
HOXA2-202ENST00000612779 CDC42SE2Q9NRR3 84 aa13.14□□□□□ -0.31
HOXA2-202ENST00000612779 TMEM238LA0A1B0GVL6 79 aa13.13□□□□□ -0.31
HOXA2-202ENST00000612779 A6NJY4 79 aa13.13□□□□□ -0.31
HOXA2-202ENST00000612779 GAGE6Q13070 117 aa13.13□□□□□ -0.31
HOXA2-202ENST00000612779 CHCHD5Q9BSY4 110 aa13.13□□□□□ -0.31
HOXA2-202ENST00000612779 A0A0J9YXV3 536 aa13.12□□□□□ -0.31
HOXA2-202ENST00000612779 DEFB131BA0A096LNP1 70 aa13.11□□□□□ -0.31
HOXA2-202ENST00000612779 APOMO95445 188 aa13.11□□□□□ -0.31
HOXA2-202ENST00000612779 FOXI1Q12951 378 aa13.11□□□□□ -0.31
HOXA2-202ENST00000612779 UBE2D1P51668 147 aa13.11□□□□□ -0.31
HOXA2-202ENST00000612779 PGPEP1Q9NXJ5 209 aa13.11□□□□□ -0.31
HOXA2-202ENST00000612779 DNAH9Q9NYC9 4486 aa13.1□□□□□ -0.31
HOXA2-202ENST00000612779 COL7A1Q02388 2944 aa13.1□□□□□ -0.31
HOXA2-202ENST00000612779 IGLV4-60A0A075B6I1 120 aa13.09□□□□□ -0.31
HOXA2-202ENST00000612779 CKS1BP61024 79 aa13.09□□□□□ -0.31
HOXA2-202ENST00000612779 TMEM101Q96IK0 257 aa13.09□□□□□ -0.31
HOXA2-202ENST00000612779 SMCPP49901 116 aaPredicted RBP13.09□□□□□ -0.31
HOXA2-202ENST00000612779 MTURNQ8N3F0 131 aa13.09□□□□□ -0.31
HOXA2-202ENST00000612779 ZNF22P17026 224 aaPredicted RBP13.08□□□□□ -0.32
HOXA2-202ENST00000612779 A0A1B0GUV1 79 aa13.07□□□□□ -0.32
HOXA2-202ENST00000612779 TINCRA0A1B0GVN0 87 aa13.07□□□□□ -0.32
HOXA2-202ENST00000612779 LYRM7Q5U5X0 104 aa13.07□□□□□ -0.32
HOXA2-202ENST00000612779 FAM19A3Q7Z5A8 133 aa13.07□□□□□ -0.32
HOXA2-202ENST00000612779 TIRAPP58753 221 aa13.07□□□□□ -0.32
HOXA2-202ENST00000612779 LELP1Q5T871 98 aa13.07□□□□□ -0.32
HOXA2-202ENST00000612779 LYPD5Q6UWN5 251 aa13.07□□□□□ -0.32
HOXA2-202ENST00000612779 CDIP1Q9H305 208 aa13.07□□□□□ -0.32
HOXA2-202ENST00000612779 TRAV10A0A0B4J240 114 aa13.06□□□□□ -0.32
HOXA2-202ENST00000612779 ZNF815PA8K554 130 aa13.06□□□□□ -0.32
HOXA2-202ENST00000612779 TMEM170BQ5T4T1 132 aa13.06□□□□□ -0.32
HOXA2-202ENST00000612779 TSPAN13O95857 204 aa13.05□□□□□ -0.32
HOXA2-202ENST00000612779 LINC00242Q5T6M2 205 aa13.05□□□□□ -0.32
HOXA2-202ENST00000612779 TMEM223A0PJW6 202 aa13.04□□□□□ -0.32
HOXA2-202ENST00000612779 TMEM262E9PQX1 116 aa13.03□□□□□ -0.32
HOXA2-202ENST00000612779 SVIPQ8NHG7 77 aa13.03□□□□□ -0.32
HOXA2-202ENST00000612779 PLEKHB2Q96CS7 222 aa13.03□□□□□ -0.32
HOXA2-202ENST00000612779 IGLV5-45A0A087WSX0 123 aa13.03□□□□□ -0.32
HOXA2-202ENST00000612779 COX6A2Q02221 97 aa13.03□□□□□ -0.32
HOXA2-202ENST00000612779 TRAV13-1A0A0B4J241 112 aa13.02□□□□□ -0.32
HOXA2-202ENST00000612779 SCGB1D4Q6XE38 83 aa13.02□□□□□ -0.32
HOXA2-202ENST00000612779 PPDPFLQ8WWR9 84 aa13.02□□□□□ -0.32
HOXA2-202ENST00000612779 PRKDCP78527 4128 aaKnown RBP13.02□□□□□ -0.33
HOXA2-202ENST00000612779 SRSF9Q13242 221 aaKnown RBP eCLIP13.01□□□□□ -0.33
HOXA2-202ENST00000612779 TEN1Q86WV5 123 aa13.01□□□□□ -0.33
HOXA2-202ENST00000612779 Q8N3U1 123 aa13.01□□□□□ -0.33
HOXA2-202ENST00000612779 TRBV20-1A0A075B6N2 111 aa13.01□□□□□ -0.33
HOXA2-202ENST00000612779 NHLRC4P0CG21 123 aaPredicted RBP13.01□□□□□ -0.33
HOXA2-202ENST00000612779 PSMB2P49721 201 aa13.01□□□□□ -0.33
HOXA2-202ENST00000612779 HERVK_113P61574 105 aa13.01□□□□□ -0.33
HOXA2-202ENST00000612779 GEMIN7Q9H840 131 aaKnown RBP13□□□□□ -0.33
HOXA2-202ENST00000612779 CDKN2A-AS1Q9UH64 79 aa13□□□□□ -0.33
HOXA2-202ENST00000612779 SPINK8P0C7L1 97 aa13□□□□□ -0.33
HOXA2-202ENST00000612779 ESRGQ1W209 222 aa13□□□□□ -0.33
HOXA2-202ENST00000612779 LOC107984156A0A0G2JMH3 177 aa12.99□□□□□ -0.33
HOXA2-202ENST00000612779 HERVK_113P63121 156 aa12.99□□□□□ -0.33
HOXA2-202ENST00000612779 ARL17AQ8IVW1 177 aa12.99□□□□□ -0.33
HOXA2-202ENST00000612779 TSPEAR-AS2P59090 65 aa12.98□□□□□ -0.33
HOXA2-202ENST00000612779 CARD19Q96LW7 228 aa12.98□□□□□ -0.33
HOXA2-202ENST00000612779 STAB2Q8WWQ8 2551 aa12.98□□□□□ -0.33
HOXA2-202ENST00000612779 C15orf53Q8NAA6 179 aa12.97□□□□□ -0.33
HOXA2-202ENST00000612779 LINC00959A0A1B0GUT2 108 aa12.96□□□□□ -0.33
HOXA2-202ENST00000612779 LEPROTO15243 131 aa12.96□□□□□ -0.33
HOXA2-202ENST00000612779 MT-ATP8P03928 68 aa12.96□□□□□ -0.33
HOXA2-202ENST00000612779 IGKV3OR2-268A0A0C4DH90 116 aa12.96□□□□□ -0.34
HOXA2-202ENST00000612779 M0QXV9 152 aa12.96□□□□□ -0.34
HOXA2-202ENST00000612779 TCL1BO95988 128 aa12.96□□□□□ -0.34
HOXA2-202ENST00000612779 XGP55808 180 aa12.96□□□□□ -0.34
HOXA2-202ENST00000612779 TRAV8-3A0A0A6YYJ7 113 aa12.95□□□□□ -0.34
HOXA2-202ENST00000612779 IGHV3-30P01768 117 aa12.95□□□□□ -0.34
HOXA2-202ENST00000612779 IGHV3-30-5P0DP03 117 aa12.95□□□□□ -0.34
HOXA2-202ENST00000612779 C10orf126Q8N4M7 172 aa12.95□□□□□ -0.34
HOXA2-202ENST00000612779 IGHV3-64A0A075B6Q5 118 aa12.94□□□□□ -0.34
HOXA2-202ENST00000612779 J3QQQ9 107 aa12.94□□□□□ -0.34
HOXA2-202ENST00000612779 WFDC10BQ8IUB3 73 aa12.94□□□□□ -0.34
HOXA2-202ENST00000612779 IGHV1-58A0A0C4DH39 117 aa12.94□□□□□ -0.34
HOXA2-202ENST00000612779 CFC1BP0CG36 223 aa12.94□□□□□ -0.34
HOXA2-202ENST00000612779 CFC1P0CG37 223 aa12.94□□□□□ -0.34
HOXA2-202ENST00000612779 IGHV3-30-3P0DP02 117 aa12.94□□□□□ -0.34
HOXA2-202ENST00000612779 LINC00269Q8N2A0 174 aa12.94□□□□□ -0.34
HOXA2-202ENST00000612779 ANGP03950 147 aaKnown RBP12.93□□□□□ -0.34
HOXA2-202ENST00000612779 TGP01266 2768 aa12.93□□□□□ -0.34
HOXA2-202ENST00000612779 IGHV3OR16-9A0A0B4J2B5 98 aa12.92□□□□□ -0.34
HOXA2-202ENST00000612779 IGLV5-39A0A0G2JS06 123 aa12.92□□□□□ -0.34
HOXA2-202ENST00000612779 CLPSL2Q6UWE3 100 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms