RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 STHQ8IWL8 128 aa10.72□□□□□ -0.69
PCDHGB1-202ENST00000611598 LINC00337Q8N6G1 96 aa10.72□□□□□ -0.69
PCDHGB1-202ENST00000611598 HERV-K104P63124 156 aa10.72□□□□□ -0.69
PCDHGB1-202ENST00000611598 LINC00643Q86TS7 51 aa10.72□□□□□ -0.69
PCDHGB1-202ENST00000611598 ZNF843Q8N446 348 aa10.72□□□□□ -0.69
PCDHGB1-202ENST00000611598 FAM208BQ5VWN6 2430 aa10.72□□□□□ -0.69
PCDHGB1-202ENST00000611598 IGKV2-28A0A075B6P5 120 aa10.71□□□□□ -0.69
PCDHGB1-202ENST00000611598 TRBV10-1A0A0K0K1A3 114 aa10.71□□□□□ -0.69
PCDHGB1-202ENST00000611598 LOC100131303A0A0U1RQF7 123 aa10.71□□□□□ -0.69
PCDHGB1-202ENST00000611598 IGKV2D-28P01615 120 aa10.71□□□□□ -0.69
PCDHGB1-202ENST00000611598 HIST2H2BCQ6DN03 193 aa10.71□□□□□ -0.69
PCDHGB1-202ENST00000611598 MIR7-3HGQ8N6C7 128 aa10.71□□□□□ -0.69
PCDHGB1-202ENST00000611598 IMUPQ9GZP8 106 aa10.71□□□□□ -0.69
PCDHGB1-202ENST00000611598 TLN2Q9Y4G6 2542 aa10.71□□□□□ -0.7
PCDHGB1-202ENST00000611598 IGKV3OR2-268A0A0C4DH90 116 aa10.71□□□□□ -0.7
PCDHGB1-202ENST00000611598 IGHV4-31P0DP07 118 aa10.71□□□□□ -0.7
PCDHGB1-202ENST00000611598 SDIM1Q6ZPB5 146 aa10.71□□□□□ -0.7
PCDHGB1-202ENST00000611598 JMJD1CQ15652 2540 aa10.7□□□□□ -0.7
PCDHGB1-202ENST00000611598 ZNF469Q96JG9 3925 aaPredicted RBP10.7□□□□□ -0.7
PCDHGB1-202ENST00000611598 GAGE2AQ6NT46 116 aa10.7□□□□□ -0.7
PCDHGB1-202ENST00000611598 NOP10Q9NPE3 64 aaKnown RBP10.7□□□□□ -0.7
PCDHGB1-202ENST00000611598 TOMM7Q9P0U1 55 aa10.7□□□□□ -0.7
PCDHGB1-202ENST00000611598 C9orf129Q5T035 196 aaKnown RBP10.7□□□□□ -0.7
PCDHGB1-202ENST00000611598 C11orf44Q8N8P7 122 aa10.7□□□□□ -0.7
PCDHGB1-202ENST00000611598 FAM110AQ9BQ89 295 aa10.7□□□□□ -0.7
PCDHGB1-202ENST00000611598 UBE2L6O14933 153 aa10.69□□□□□ -0.7
PCDHGB1-202ENST00000611598 CRPP02741 224 aa10.69□□□□□ -0.7
PCDHGB1-202ENST00000611598 PTPN13Q12923 2485 aa10.69□□□□□ -0.7
PCDHGB1-202ENST00000611598 RPL28P46779 137 aaKnown RBP10.69□□□□□ -0.7
PCDHGB1-202ENST00000611598 TMEM243Q9BU79 118 aa10.69□□□□□ -0.7
PCDHGB1-202ENST00000611598 A0A087WYN8 130 aa10.68□□□□□ -0.7
PCDHGB1-202ENST00000611598 MALP21145 153 aa10.68□□□□□ -0.7
PCDHGB1-202ENST00000611598 FAM222AQ5U5X8 452 aa10.68□□□□□ -0.7
PCDHGB1-202ENST00000611598 SND1-IT1Q9HBX3 110 aa10.68□□□□□ -0.7
PCDHGB1-202ENST00000611598 NF1P21359 2839 aa10.68□□□□□ -0.7
PCDHGB1-202ENST00000611598 CR1P17927 2039 aa10.68□□□□□ -0.7
PCDHGB1-202ENST00000611598 TRAV13-2A0A0B4J235 113 aa10.68□□□□□ -0.7
PCDHGB1-202ENST00000611598 COX7B2Q8TF08 81 aa10.68□□□□□ -0.7
PCDHGB1-202ENST00000611598 A0A1W2PRX2 142 aa10.67□□□□□ -0.7
PCDHGB1-202ENST00000611598 ABCA12Q86UK0 2595 aa10.67□□□□□ -0.7
PCDHGB1-202ENST00000611598 SMIM11BQ8TCY0 68 aa10.67□□□□□ -0.7
PCDHGB1-202ENST00000611598 SETXQ7Z333 2677 aaKnown RBP10.66□□□□□ -0.7
PCDHGB1-202ENST00000611598 SONP18583 2426 aaKnown RBP10.66□□□□□ -0.7
PCDHGB1-202ENST00000611598 IGLV4-60A0A075B6I1 120 aa10.65□□□□□ -0.7
PCDHGB1-202ENST00000611598 INAFM2P0DMQ5 153 aa10.65□□□□□ -0.7
PCDHGB1-202ENST00000611598 PLA2G2AP14555 144 aa10.65□□□□□ -0.7
PCDHGB1-202ENST00000611598 LINC00158P58513 81 aa10.65□□□□□ -0.7
PCDHGB1-202ENST00000611598 PF4P02776 101 aa10.65□□□□□ -0.71
PCDHGB1-202ENST00000611598 C5orf38Q86SI9 138 aa10.65□□□□□ -0.71
PCDHGB1-202ENST00000611598 NAV2Q8IVL1 2488 aa10.64□□□□□ -0.71
PCDHGB1-202ENST00000611598 LRRK2Q5S007 2527 aa10.64□□□□□ -0.71
PCDHGB1-202ENST00000611598 ATP5G1P05496 136 aa10.64□□□□□ -0.71
PCDHGB1-202ENST00000611598 WFDC10AQ9H1F0 79 aa10.64□□□□□ -0.71
PCDHGB1-202ENST00000611598 PPDPFQ9H3Y8 114 aa10.64□□□□□ -0.71
PCDHGB1-202ENST00000611598 SETD2Q9BYW2 2564 aaPredicted RBP10.64□□□□□ -0.71
PCDHGB1-202ENST00000611598 GIG44P09565 113 aaPredicted RBP10.64□□□□□ -0.71
PCDHGB1-202ENST00000611598 CCL18P55774 89 aa10.64□□□□□ -0.71
PCDHGB1-202ENST00000611598 C9orf153Q5TBE3 101 aa10.64□□□□□ -0.71
PCDHGB1-202ENST00000611598 C14orf132Q9NPU4 83 aa10.64□□□□□ -0.71
PCDHGB1-202ENST00000611598 TRGV2A0A075B6R0 118 aa10.63□□□□□ -0.71
PCDHGB1-202ENST00000611598 PLAC8L1A1L4L8 177 aa10.63□□□□□ -0.71
PCDHGB1-202ENST00000611598 CFAP161Q6P656 301 aa10.63□□□□□ -0.71
PCDHGB1-202ENST00000611598 C3orf22Q8N5N4 141 aa10.63□□□□□ -0.71
PCDHGB1-202ENST00000611598 UBR5O95071 2799 aaPredicted RBP10.63□□□□□ -0.71
PCDHGB1-202ENST00000611598 TMEM126AQ9H061 195 aa10.63□□□□□ -0.71
PCDHGB1-202ENST00000611598 DNAL4O96015 105 aa10.62□□□□□ -0.71
PCDHGB1-202ENST00000611598 PFN2P35080 140 aa10.62□□□□□ -0.71
PCDHGB1-202ENST00000611598 KRTAP10-9P60411 292 aa10.62□□□□□ -0.71
PCDHGB1-202ENST00000611598 CXCL5P42830 114 aa10.61□□□□□ -0.71
PCDHGB1-202ENST00000611598 IGHV3OR16-9A0A0B4J2B5 98 aa10.6□□□□□ -0.71
PCDHGB1-202ENST00000611598 TRAV25A0A0B4J276 109 aa10.6□□□□□ -0.71
PCDHGB1-202ENST00000611598 UQCRQO14949 82 aa10.6□□□□□ -0.71
PCDHGB1-202ENST00000611598 LECT2O14960 151 aa10.6□□□□□ -0.71
PCDHGB1-202ENST00000611598 C11orf68Q9H3H3 251 aaKnown RBP10.6□□□□□ -0.71
PCDHGB1-202ENST00000611598 KLK5Q9Y337 293 aaPredicted RBP10.6□□□□□ -0.71
PCDHGB1-202ENST00000611598 SLPIP03973 132 aa10.59□□□□□ -0.71
PCDHGB1-202ENST00000611598 RPL35AP18077 110 aaKnown RBP10.59□□□□□ -0.71
PCDHGB1-202ENST00000611598 LRRC75A-AS1Q8N1F1 130 aa10.59□□□□□ -0.71
PCDHGB1-202ENST00000611598 TRGV4A0A0C4DH28 118 aa10.58□□□□□ -0.72
PCDHGB1-202ENST00000611598 CCL24O00175 119 aa10.58□□□□□ -0.72
PCDHGB1-202ENST00000611598 LINC00526Q96FQ7 95 aa10.58□□□□□ -0.72
PCDHGB1-202ENST00000611598 LINC00846Q9NV44 126 aa10.58□□□□□ -0.72
PCDHGB1-202ENST00000611598 IGKV3D-7A0A0C4DH55 119 aa10.57□□□□□ -0.72
PCDHGB1-202ENST00000611598 NCR3O14931 201 aa10.57□□□□□ -0.72
PCDHGB1-202ENST00000611598 PAX4O43316 350 aa10.57□□□□□ -0.72
PCDHGB1-202ENST00000611598 OR13C6PQ8NH95 151 aa10.57□□□□□ -0.72
PCDHGB1-202ENST00000611598 C2orf48Q96LS8 159 aa10.57□□□□□ -0.72
PCDHGB1-202ENST00000611598 TRBV6-8A0A0A6YYG3 113 aa10.57□□□□□ -0.72
PCDHGB1-202ENST00000611598 TRBV6-4A0A1B0GX49 114 aa10.57□□□□□ -0.72
PCDHGB1-202ENST00000611598 C16orf74Q96GX8 76 aa10.57□□□□□ -0.72
PCDHGB1-202ENST00000611598 OVOL2Q9BRP0 275 aa10.57□□□□□ -0.72
PCDHGB1-202ENST00000611598 A0A087WZ39 114 aa10.56□□□□□ -0.72
PCDHGB1-202ENST00000611598 IBA57-AS1B1ANH7 110 aa10.56□□□□□ -0.72
PCDHGB1-202ENST00000611598 HIST1H4AP62805 103 aaKnown RBP10.56□□□□□ -0.72
PCDHGB1-202ENST00000611598 OBSCN-AS1Q96MR7 158 aa10.56□□□□□ -0.72
PCDHGB1-202ENST00000611598 H0YGX0 51 aa10.55□□□□□ -0.72
PCDHGB1-202ENST00000611598 COX7CP15954 63 aa10.55□□□□□ -0.72
PCDHGB1-202ENST00000611598 FHL2Q14192 279 aa10.54□□□□□ -0.72
PCDHGB1-202ENST00000611598 TENM4Q6N022 2769 aa10.54□□□□□ -0.72
PCDHGB1-202ENST00000611598 A0A087WVE0 104 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 433.1 ms