RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 M0R381 172 aa4.97□□□□□ -1.61
CBWD1-219ENST00000611457 GAS8-AS1O95177 125 aa4.97□□□□□ -1.61
CBWD1-219ENST00000611457 Q1RN00 199 aa4.97□□□□□ -1.61
CBWD1-219ENST00000611457 UBE2WQ96B02 151 aa4.97□□□□□ -1.61
CBWD1-219ENST00000611457 TOMM6Q96B49 74 aa4.97□□□□□ -1.61
CBWD1-219ENST00000611457 EMP1P54849 157 aa4.96□□□□□ -1.62
CBWD1-219ENST00000611457 SPANXN1Q5VSR9 72 aa4.96□□□□□ -1.62
CBWD1-219ENST00000611457 Q6ZQT7 251 aa4.96□□□□□ -1.62
CBWD1-219ENST00000611457 TMEM101Q96IK0 257 aa4.96□□□□□ -1.62
CBWD1-219ENST00000611457 SMIM2Q9BVW6 85 aa4.96□□□□□ -1.62
CBWD1-219ENST00000611457 A0A0J9YY99 117 aa4.96□□□□□ -1.62
CBWD1-219ENST00000611457 PRB4P10163 310 aaPredicted RBP4.96□□□□□ -1.62
CBWD1-219ENST00000611457 PLEKHB2Q96CS7 222 aa4.96□□□□□ -1.62
CBWD1-219ENST00000611457 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.95□□□□□ -1.62
CBWD1-219ENST00000611457 EPM2AB3EWF7 344 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 PRAC2D3DTV9 90 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 ZNF80P51504 273 aaPredicted RBP4.95□□□□□ -1.62
CBWD1-219ENST00000611457 LINC01620Q4KN68 170 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 SLC25A29Q8N8R3 303 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 NRACQ8N912 160 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 Q8TAT8 98 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 TRBV10-1A0A0K0K1A3 114 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 TRBV10-2A0A0K0K1G8 114 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 M0R2P5 195 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 IGHV3-30P01768 117 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 IGHV3-30-5P0DP03 117 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 ZNF56Q15929 161 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 IMUPQ9GZP8 106 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 CSDC2Q9Y534 153 aaKnown RBP4.95□□□□□ -1.62
CBWD1-219ENST00000611457 FAM240AA0A1B0GVK7 77 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 COX6CP09669 75 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 FHL2Q14192 279 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 C9orf153Q5TBE3 101 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 CHCHD5Q9BSY4 110 aa4.95□□□□□ -1.62
CBWD1-219ENST00000611457 DEFB131BA0A096LNP1 70 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 PPP1R17O96001 155 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 ERCC8Q13216 396 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 PRR9Q5T870 116 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 FAM222AQ5U5X8 452 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 C2orf82Q6UX34 121 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 C2orf66Q6UXQ4 117 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 OR13C6PQ8NH95 151 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 BAALCQ8WXS3 180 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 TEX49A0A1B0GTD5 131 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 H7C2G1 150 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 J3KT08 172 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 IGHV3-33P01772 117 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 LGALS3P17931 250 aaKnown RBP4.94□□□□□ -1.62
CBWD1-219ENST00000611457 RPL35AP18077 110 aaKnown RBP4.94□□□□□ -1.62
CBWD1-219ENST00000611457 SUMO2P61956 95 aaKnown RBP4.94□□□□□ -1.62
CBWD1-219ENST00000611457 Q6ZTC4 211 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 TRAV26-2A0A0B4J265 109 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 A0A0B4J2C4 111 aa4.94□□□□□ -1.62
CBWD1-219ENST00000611457 TRBV7-7A0A0K0K1E9 115 aa4.93□□□□□ -1.62
CBWD1-219ENST00000611457 ACYP1P07311 99 aa4.93□□□□□ -1.62
CBWD1-219ENST00000611457 VSIG2Q96IQ7 327 aa4.93□□□□□ -1.62
CBWD1-219ENST00000611457 LINC01587Q99440 93 aa4.93□□□□□ -1.62
CBWD1-219ENST00000611457 A4D1N5 150 aa4.93□□□□□ -1.62
CBWD1-219ENST00000611457 H3BT86 120 aa4.93□□□□□ -1.62
CBWD1-219ENST00000611457 UQCRQO14949 82 aa4.93□□□□□ -1.62
CBWD1-219ENST00000611457 NANOS2P60321 138 aaKnown RBP4.93□□□□□ -1.62
CBWD1-219ENST00000611457 LINC01556Q5JQF7 62 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 C3orf22Q8N5N4 141 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 A0A1B0GX51 115 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 H7C423 109 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 RTL8CO15255 209 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 RNF182Q8N6D2 247 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 KIF25-AS1Q9Y6Z4 181 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 TRBV30A0A0K0K1B3 111 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 PMVKQ15126 192 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 PRO0255Q9UI72 69 aa4.92□□□□□ -1.62
CBWD1-219ENST00000611457 A0A096LPF7 62 aa4.91□□□□□ -1.62
CBWD1-219ENST00000611457 FAM236AA0A1B0GUQ0 79 aa4.91□□□□□ -1.62
CBWD1-219ENST00000611457 FAM236BA0A1B0GV22 79 aa4.91□□□□□ -1.62
CBWD1-219ENST00000611457 C11orf86A6NJI1 115 aa4.91□□□□□ -1.62
CBWD1-219ENST00000611457 J3QQQ9 107 aa4.91□□□□□ -1.62
CBWD1-219ENST00000611457 RNASE3P12724 160 aaKnown RBP4.91□□□□□ -1.62
CBWD1-219ENST00000611457 IGKV3D-20A0A0C4DH25 116 aa4.91□□□□□ -1.62
CBWD1-219ENST00000611457 IGHV3-35A0A0C4DH35 117 aa4.91□□□□□ -1.62
CBWD1-219ENST00000611457 NBDYA0A0U1RRE5 68 aa4.91□□□□□ -1.62
CBWD1-219ENST00000611457 DAD1P61803 113 aa4.91□□□□□ -1.62
CBWD1-219ENST00000611457 TMEM141Q96I45 108 aa4.91□□□□□ -1.62
CBWD1-219ENST00000611457 IGHV3-66A0A0C4DH42 116 aa4.9□□□□□ -1.62
CBWD1-219ENST00000611457 RPS28P62857 69 aaKnown RBP4.9□□□□□ -1.62
CBWD1-219ENST00000611457 HERVK_113P63121 156 aa4.9□□□□□ -1.62
CBWD1-219ENST00000611457 DPH3P1Q9H4G8 78 aa4.9□□□□□ -1.62
CBWD1-219ENST00000611457 LINC00526Q96FQ7 95 aa4.9□□□□□ -1.62
CBWD1-219ENST00000611457 JMJD1CQ15652 2540 aa4.9□□□□□ -1.63
CBWD1-219ENST00000611457 IGHV3-53P01767 116 aa4.9□□□□□ -1.63
CBWD1-219ENST00000611457 S100A4P26447 101 aaKnown RBP4.9□□□□□ -1.63
CBWD1-219ENST00000611457 SPINK13Q1W4C9 94 aa4.9□□□□□ -1.63
CBWD1-219ENST00000611457 XCL2Q9UBD3 114 aa4.9□□□□□ -1.63
CBWD1-219ENST00000611457 ICOSQ9Y6W8 199 aa4.9□□□□□ -1.63
CBWD1-219ENST00000611457 IGHV3-49A0A0A0MS15 119 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 IGFL4Q6B9Z1 124 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 FAM19A5Q7Z5A7 132 aaPredicted RBP4.89□□□□□ -1.63
CBWD1-219ENST00000611457 DNAH5Q8TE73 4624 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 F6UB75 175 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 F8WDY8 70 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms