RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 Q6JHZ5 121 aa1.66□□□□□ -2.14
SMCHD1-213ENST00000609587 C4orf3Q8WVX3 66 aa1.66□□□□□ -2.14
SMCHD1-213ENST00000609587 PI4KAP42356 2102 aa1.66□□□□□ -2.14
SMCHD1-213ENST00000609587 LRRC7Q96NW7 1537 aa1.66□□□□□ -2.14
SMCHD1-213ENST00000609587 COL4A1P02462 1669 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 PLCH1Q4KWH8 1693 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 ALS2Q96Q42 1657 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 ADGRB2O60241 1585 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 VWDEQ8N2E2 1590 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 MRC1P22897 1456 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 IGKV3D-7A0A0C4DH55 119 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 IGKV3OR2-268A0A0C4DH90 116 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 FXYD1O00168 92 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 C3orf79P0CE67 100 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 CCL3L1P16619 93 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 GCHFRP30047 84 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 PCOTHQ58A44 107 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 SFTA2Q6UW10 78 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 ZNF563Q8TA94 476 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 AMELXQ99217 191 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 V9GYH0 126 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 SIP14410 1827 aa1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 PARP4Q9UKK3 1724 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 CICQ96RK0 1608 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-213ENST00000609587 MYO7BQ6PIF6 2116 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 UGGT1Q9NYU2 1555 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 BAHCC1Q9P281 2608 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 IFT172Q9UG01 1749 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 CRYBG1Q9Y4K1 1723 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 A0A087WTM6 91 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 NBDYA0A0U1RRE5 68 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 LOC285095A0A1B0GVY8 99 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 TRBV6-4A0A1B0GX49 114 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 H3BRN7 92 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 PLGLAQ15195 96 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 PSMG4Q5JS54 123 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 USP32Q8NFA0 1604 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 WIZO95785 1651 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 SHPRHQ149N8 1683 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 NHSQ6T4R5 1651 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 CEP192Q8TEP8 1941 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 DIP2AQ14689 1571 aa1.64□□□□□ -2.15
SMCHD1-213ENST00000609587 SPTBP11277 2137 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 TRBV7-4A0A0J9YYF1 115 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 A0A1B0GWA3 101 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 ZNF815PA8K554 130 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 CEBPZOSA8MTT3 80 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 ARMS2P0C7Q2 107 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 CCL18P55774 89 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 FAM74A4Q5TZK3 123 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 PREX1Q8TCU6 1659 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 TNRC6BQ9UPQ9 1833 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 CACNA1GO43497 2377 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 GBF1Q92538 1859 aa1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 NKTRP30414 1462 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-213ENST00000609587 NHSL1Q5SYE7 1610 aa1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 LOC285556D6RIA3 1793 aa1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 ZFHX3Q15911 3703 aa1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 CROCC2H7BZ55 1655 aa1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 HMGA1P17096 107 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 SSBP1Q04837 148 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 C10orf55Q5SWW7 151 aa1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 C6orf201Q7Z4U5 140 aa1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 HILPDAQ9Y5L2 63 aa1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 LINC01558Q9Y6Z2 57 aa1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 ATP7BP35670 1465 aa1.62□□□□□ -2.15
SMCHD1-213ENST00000609587 TSC2P49815 1807 aa1.61□□□□□ -2.15
SMCHD1-213ENST00000609587 MYO7AQ13402 2215 aa1.61□□□□□ -2.15
SMCHD1-213ENST00000609587 FXYD6-FXYD2A0A087WZ82 144 aa1.61□□□□□ -2.15
SMCHD1-213ENST00000609587 SPAG11BQ08648 103 aa1.61□□□□□ -2.15
SMCHD1-213ENST00000609587 ATP5EP2Q5VTU8 51 aa1.61□□□□□ -2.15
SMCHD1-213ENST00000609587 SPAG11AQ6PDA7 123 aa1.61□□□□□ -2.15
SMCHD1-213ENST00000609587 COX7B2Q8TF08 81 aa1.61□□□□□ -2.15
SMCHD1-213ENST00000609587 SPRR4Q96PI1 79 aa1.61□□□□□ -2.15
SMCHD1-213ENST00000609587 ZNF831Q5JPB2 1677 aa1.61□□□□□ -2.15
SMCHD1-213ENST00000609587 RREB1Q92766 1687 aa1.61□□□□□ -2.15
SMCHD1-213ENST00000609587 ANKRD36A6QL64 1941 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 EIF2AK4Q9P2K8 1649 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 TRBV6-5A0A0K0K1A5 114 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 JMJD7-PLA2G4BH0Y9G9 81 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 PPP1R17O96001 155 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 IFI27P40305 119 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 ZNF137PP52743 207 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 KRTAP13-4Q3LI77 160 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 SMIM5Q71RC9 77 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 LINC00846Q9NV44 126 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 ARL2-SNX15V9GYD0 113 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 RTTNQ86VV8 2226 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 MDC1Q14676 2089 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 NUP188Q5SRE5 1749 aa1.6□□□□□ -2.15
SMCHD1-213ENST00000609587 DNAJC13O75165 2243 aa1.59□□□□□ -2.15
SMCHD1-213ENST00000609587 LRP6O75581 1613 aa1.59□□□□□ -2.15
SMCHD1-213ENST00000609587 BIVM-ERCC5R4GMW8 1640 aa1.59□□□□□ -2.15
SMCHD1-213ENST00000609587 IGKV2-40A0A087WW87 121 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-213ENST00000609587 LOC110117498A0A087WWA1 95 aa1.59□□□□□ -2.15
SMCHD1-213ENST00000609587 M0R2N4 97 aa1.59□□□□□ -2.15
SMCHD1-213ENST00000609587 INE1O15225 51 aa1.59□□□□□ -2.15
SMCHD1-213ENST00000609587 PPYP01298 95 aa1.59□□□□□ -2.15
SMCHD1-213ENST00000609587 IGKV2D-40P01614 121 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-213ENST00000609587 PPP1R1CQ8WVI7 109 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms