RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 UPK1BO75841 260 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 UBE2G2P60604 165 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 KIAA0087Q14695 138 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 TRIQKQ629K1 86 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 Q8NBF4 154 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 S100ZQ8WXG8 99 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 HIST1H2BAQ96A08 127 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 TP73-AS1Q9UF72 201 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 HSPB11Q9Y547 144 aa4.29□□□□□ -1.72
LINC01396-201ENST00000609099 TRAV13-1A0A0B4J241 112 aa4.28□□□□□ -1.72
LINC01396-201ENST00000609099 TRBV30A0A0K0K1B3 111 aa4.28□□□□□ -1.72
LINC01396-201ENST00000609099 A0A1W2PRE2 83 aa4.28□□□□□ -1.72
LINC01396-201ENST00000609099 NAP1L6A6NFF2 107 aa4.28□□□□□ -1.72
LINC01396-201ENST00000609099 FAM74A7A6NL05 159 aa4.28□□□□□ -1.72
LINC01396-201ENST00000609099 RPS20P60866 119 aaKnown RBP4.28□□□□□ -1.72
LINC01396-201ENST00000609099 MRAP2Q96G30 205 aa4.28□□□□□ -1.72
LINC01396-201ENST00000609099 FMC1Q96HJ9 113 aa4.28□□□□□ -1.72
LINC01396-201ENST00000609099 RNASE7Q9H1E1 156 aaKnown RBP4.28□□□□□ -1.72
LINC01396-201ENST00000609099 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
LINC01396-201ENST00000609099 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
LINC01396-201ENST00000609099 TRGC1P0CF51 173 aa4.27□□□□□ -1.73
LINC01396-201ENST00000609099 PMCHP20382 165 aa4.27□□□□□ -1.73
LINC01396-201ENST00000609099 SMAGPQ0VAQ4 97 aa4.27□□□□□ -1.73
LINC01396-201ENST00000609099 NUDT15Q9NV35 164 aa4.27□□□□□ -1.73
LINC01396-201ENST00000609099 CXorf1O96002 111 aa4.26□□□□□ -1.73
LINC01396-201ENST00000609099 FOXA3P55318 350 aaPredicted RBP4.26□□□□□ -1.73
LINC01396-201ENST00000609099 RPS29P62273 56 aaKnown RBP4.26□□□□□ -1.73
LINC01396-201ENST00000609099 MRPL52Q86TS9 123 aaKnown RBP4.26□□□□□ -1.73
LINC01396-201ENST00000609099 Q8N377 158 aa4.26□□□□□ -1.73
LINC01396-201ENST00000609099 FAM210AQ96ND0 272 aa4.26□□□□□ -1.73
LINC01396-201ENST00000609099 TPPP3Q9BW30 176 aa4.26□□□□□ -1.73
LINC01396-201ENST00000609099 NKX6-2Q9C056 277 aaPredicted RBP4.26□□□□□ -1.73
LINC01396-201ENST00000609099 CENPXA8MT69 81 aa4.25□□□□□ -1.73
LINC01396-201ENST00000609099 ZNF727A8MUV8 499 aa4.25□□□□□ -1.73
LINC01396-201ENST00000609099 I3L3M4 83 aa4.25□□□□□ -1.73
LINC01396-201ENST00000609099 C2orf82Q6UX34 121 aa4.25□□□□□ -1.73
LINC01396-201ENST00000609099 PLEKHB2Q96CS7 222 aa4.25□□□□□ -1.73
LINC01396-201ENST00000609099 LINC00167Q96N53 147 aa4.25□□□□□ -1.73
LINC01396-201ENST00000609099 GNB1LQ9BYB4 327 aa4.25□□□□□ -1.73
LINC01396-201ENST00000609099 INMT-MINDY4F8WBC2 141 aa4.24□□□□□ -1.73
LINC01396-201ENST00000609099 H2BFSP57053 126 aa4.24□□□□□ -1.73
LINC01396-201ENST00000609099 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
LINC01396-201ENST00000609099 MZT2BQ6NZ67 158 aa4.24□□□□□ -1.73
LINC01396-201ENST00000609099 Q6ZUT4 128 aa4.24□□□□□ -1.73
LINC01396-201ENST00000609099 LINC00469Q8N7U9 141 aa4.24□□□□□ -1.73
LINC01396-201ENST00000609099 TMEM242Q9NWH2 141 aa4.24□□□□□ -1.73
LINC01396-201ENST00000609099 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
LINC01396-201ENST00000609099 FAM240BA0A1B0GVZ2 78 aa4.23□□□□□ -1.73
LINC01396-201ENST00000609099 SDHAF1A6NFY7 115 aa4.23□□□□□ -1.73
LINC01396-201ENST00000609099 ATP6V0CP27449 155 aa4.23□□□□□ -1.73
LINC01396-201ENST00000609099 C9orf92A6NGG3 77 aa4.22□□□□□ -1.73
LINC01396-201ENST00000609099 GAGE10A6NGK3 116 aa4.22□□□□□ -1.73
LINC01396-201ENST00000609099 F2Z2F3 143 aa4.22□□□□□ -1.73
LINC01396-201ENST00000609099 SCO1O75880 301 aa4.22□□□□□ -1.73
LINC01396-201ENST00000609099 LGALS3P17931 250 aaKnown RBP4.22□□□□□ -1.73
LINC01396-201ENST00000609099 PRLHP81277 87 aa4.22□□□□□ -1.73
LINC01396-201ENST00000609099 PNRC1Q12796 327 aaPredicted RBP4.22□□□□□ -1.73
LINC01396-201ENST00000609099 TEX261Q6UWH6 196 aa4.22□□□□□ -1.73
LINC01396-201ENST00000609099 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
LINC01396-201ENST00000609099 ENKURQ8TC29 256 aa4.22□□□□□ -1.73
LINC01396-201ENST00000609099 XAGE1AQ9HD64 81 aa4.22□□□□□ -1.73
LINC01396-201ENST00000609099 ZNF706Q9Y5V0 76 aaPredicted RBP4.22□□□□□ -1.73
LINC01396-201ENST00000609099 MBP02144 154 aa4.21□□□□□ -1.74
LINC01396-201ENST00000609099 RPL32P62910 135 aaKnown RBP4.21□□□□□ -1.74
LINC01396-201ENST00000609099 CBLN2Q8IUK8 224 aa4.21□□□□□ -1.74
LINC01396-201ENST00000609099 ACTR3CQ9C0K3 210 aaPredicted RBP4.21□□□□□ -1.74
LINC01396-201ENST00000609099 CSDC2Q9Y534 153 aaKnown RBP4.21□□□□□ -1.74
LINC01396-201ENST00000609099 C7orf77A4D0Y5 90 aa4.2□□□□□ -1.74
LINC01396-201ENST00000609099 RAB19A4D1S5 217 aa4.2□□□□□ -1.74
LINC01396-201ENST00000609099 S100A9P06702 114 aaKnown RBP4.2□□□□□ -1.74
LINC01396-201ENST00000609099 AKR1C3P42330 323 aa4.2□□□□□ -1.74
LINC01396-201ENST00000609099 LINC01551Q86U37 167 aa4.2□□□□□ -1.74
LINC01396-201ENST00000609099 STOML3Q8TAV4 291 aa4.2□□□□□ -1.74
LINC01396-201ENST00000609099 PPP1R1CQ8WVI7 109 aa4.2□□□□□ -1.74
LINC01396-201ENST00000609099 GEMIN7Q9H840 131 aaKnown RBP4.2□□□□□ -1.74
LINC01396-201ENST00000609099 MPC2O95563 127 aa4.19□□□□□ -1.74
LINC01396-201ENST00000609099 IFNA1P01562 189 aa4.19□□□□□ -1.74
LINC01396-201ENST00000609099 SMIM15Q7Z3B0 74 aa4.19□□□□□ -1.74
LINC01396-201ENST00000609099 NKAPP1Q8N9T2 125 aa4.19□□□□□ -1.74
LINC01396-201ENST00000609099 TCEAL7Q9BRU2 100 aa4.19□□□□□ -1.74
LINC01396-201ENST00000609099 TRBV6-5A0A0K0K1A5 114 aa4.18□□□□□ -1.74
LINC01396-201ENST00000609099 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
LINC01396-201ENST00000609099 XKRY2A2RUG3 117 aa4.18□□□□□ -1.74
LINC01396-201ENST00000609099 CKS1BP61024 79 aa4.18□□□□□ -1.74
LINC01396-201ENST00000609099 RGS21Q2M5E4 152 aa4.18□□□□□ -1.74
LINC01396-201ENST00000609099 BAGE2Q86Y30 109 aa4.18□□□□□ -1.74
LINC01396-201ENST00000609099 SPRR4Q96PI1 79 aa4.18□□□□□ -1.74
LINC01396-201ENST00000609099 CNFNQ9BYD5 112 aa4.18□□□□□ -1.74
LINC01396-201ENST00000609099 TGIF2-C20orf24A0A0A6YYL0 155 aa4.17□□□□□ -1.74
LINC01396-201ENST00000609099 C20orf202A1L168 122 aa4.17□□□□□ -1.74
LINC01396-201ENST00000609099 PRSS2P07478 247 aa4.17□□□□□ -1.74
LINC01396-201ENST00000609099 POLR2KP53803 58 aaKnown RBP4.17□□□□□ -1.74
LINC01396-201ENST00000609099 TWIST1Q15672 202 aa4.17□□□□□ -1.74
LINC01396-201ENST00000609099 SSBP3-AS1Q7Z2R9 100 aa4.17□□□□□ -1.74
LINC01396-201ENST00000609099 TMEM18Q96B42 140 aa4.17□□□□□ -1.74
LINC01396-201ENST00000609099 PSMG3Q9BT73 122 aaPredicted RBP4.17□□□□□ -1.74
LINC01396-201ENST00000609099 HIGD2AQ9BW72 106 aa4.17□□□□□ -1.74
LINC01396-201ENST00000609099 ST20Q9HBF5 79 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms