RNA–Protein interactions for RNA: ENST00000608490.1

CSNK2A1-207, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-207ENST00000608490 NKTRP30414 1462 aaKnown RBP1.35□□□□□ -2.19
CSNK2A1-207ENST00000608490 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
CSNK2A1-207ENST00000608490 TRPM2O94759 1503 aa1.35□□□□□ -2.19
CSNK2A1-207ENST00000608490 ASXL1Q8IXJ9 1541 aa1.35□□□□□ -2.19
CSNK2A1-207ENST00000608490 FMN2Q9NZ56 1722 aa1.35□□□□□ -2.19
CSNK2A1-207ENST00000608490 SNRNP200O75643 2136 aaKnown RBP1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 SETBP1Q9Y6X0 1596 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 DLEC1Q9Y238 1755 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 DNHD1Q96M86 4753 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 CFAP47Q6ZTR5 3102 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 USP32Q8NFA0 1604 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 SBF2Q86WG5 1849 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 WNK3Q9BYP7 1800 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 LOC285095A0A1B0GVY8 99 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 A0A1W2PPM0 123 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 LYNX1P0DP58 116 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 LENEPQ9Y5L5 61 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 R4GMQ9 66 aa1.34□□□□□ -2.19
CSNK2A1-207ENST00000608490 NUP188Q5SRE5 1749 aa1.34□□□□□ -2.2
CSNK2A1-207ENST00000608490 C2CD3Q4AC94 2353 aa1.34□□□□□ -2.2
CSNK2A1-207ENST00000608490 MED13Q9UHV7 2174 aa1.34□□□□□ -2.2
CSNK2A1-207ENST00000608490 RGPD5Q99666 1765 aa1.34□□□□□ -2.2
CSNK2A1-207ENST00000608490 PHRF1Q9P1Y6 1649 aaKnown RBP1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 ZFYVE26Q68DK2 2539 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 RREB1Q92766 1687 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 ALS2Q96Q42 1657 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 TECTAO75443 2155 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 MED12Q93074 2177 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 NWD2Q9ULI1 1742 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 CLPSL1A2RUU4 121 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 ARL14EPLP0DKL9 152 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 Q6ZSA8 131 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 DYNLRB1Q9NP97 96 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 LINC00474Q9P2X8 69 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 UQCR10Q9UDW1 63 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 V9GYS6 101 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 EYSQ5T1H1 3165 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 MUC22E2RYF6 1773 aaPredicted RBP1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 SYNE2Q8WXH0 6885 aaKnown RBP1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 CDC42BPGQ6DT37 1551 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 RYR3Q15413 4870 aa1.33□□□□□ -2.2
CSNK2A1-207ENST00000608490 TOPAZ1Q8N9V7 1692 aa1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 RGPD1P0DJD0 1748 aa1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 PXDNQ92626 1479 aa1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 AKAP12Q02952 1782 aa1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 GNGT2O14610 69 aa1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 PPP1R17O96001 155 aa1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 FXYD6P3P58550 94 aa1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 ASCC3Q8N3C0 2202 aaKnown RBP1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 KIF1AQ12756 1690 aa1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 ITSN1Q15811 1721 aa1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 ANKRD50Q9ULJ7 1429 aa1.32□□□□□ -2.2
CSNK2A1-207ENST00000608490 RGPD2P0DJD1 1756 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 SPG11Q96JI7 2443 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 C1orf167Q5SNV9 1468 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 PDZD2O15018 2839 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 ABCA4P78363 2273 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 VCANP13611 3396 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 LRRC37A3O60309 1634 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 NDUFC1O43677 76 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 SPAG11BQ08648 103 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 SPAG11AQ6PDA7 123 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 FAM167A-AS1Q96KT0 104 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 VAMP8Q9BV40 100 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 REV3LO60673 3130 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 LMO7Q8WWI1 1683 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 NEBP20929 6669 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 PEAK1Q9H792 1746 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 RGPD3A6NKT7 1758 aaPredicted RBP1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 RGPD4Q7Z3J3 1758 aa1.31□□□□□ -2.2
CSNK2A1-207ENST00000608490 TTC28Q96AY4 2481 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 MYOM1P52179 1685 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 PARP4Q9UKK3 1724 aaKnown RBP1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 PRRC2BQ5JSZ5 2229 aaKnown RBP1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 LTN1O94822 1766 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 COL14A1Q05707 1796 aaKnown RBP1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 MT-ATP8P03928 68 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 PRB1P04280 392 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 SEC11AP67812 179 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 C6orf52Q5T4I8 152 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 BAGE3Q86Y29 109 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 WFDC6Q9BQY6 131 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 PKD1L1Q8TDX9 2849 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 MAP1BP46821 2468 aaKnown RBP1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 USP9YO00507 2555 aaPredicted RBP1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 RALGAPBQ86X10 1494 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 CFAP46Q8IYW2 2715 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 SPTBP11277 2137 aa1.3□□□□□ -2.2
CSNK2A1-207ENST00000608490 PAPPAQ13219 1627 aa1.29□□□□□ -2.2
CSNK2A1-207ENST00000608490 KMT2CQ8NEZ4 4911 aaKnown RBP1.29□□□□□ -2.2
CSNK2A1-207ENST00000608490 SPTBN5Q9NRC6 3674 aaKnown RBP1.29□□□□□ -2.2
CSNK2A1-207ENST00000608490 QSER1Q2KHR3 1735 aa1.29□□□□□ -2.2
CSNK2A1-207ENST00000608490 ARAP2Q8WZ64 1704 aa1.29□□□□□ -2.2
CSNK2A1-207ENST00000608490 BTAF1O14981 1849 aa1.29□□□□□ -2.2
CSNK2A1-207ENST00000608490 FLNAP21333 2647 aaKnown RBP1.29□□□□□ -2.2
CSNK2A1-207ENST00000608490 BRCA2P51587 3418 aa1.29□□□□□ -2.2
CSNK2A1-207ENST00000608490 NCOA6Q14686 2063 aaPredicted RBP1.29□□□□□ -2.2
CSNK2A1-207ENST00000608490 A0A087WTM6 91 aa1.29□□□□□ -2.2
CSNK2A1-207ENST00000608490 hADV29S1A0JD25 119 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms