RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 STHQ8IWL8 128 aa8.87□□□□□ -0.99
MSH6-212ENST00000607272 C1orf158Q8N1D5 194 aa8.87□□□□□ -0.99
MSH6-212ENST00000607272 Q96MF0 132 aa8.87□□□□□ -0.99
MSH6-212ENST00000607272 DNAL4O96015 105 aa8.86□□□□□ -0.99
MSH6-212ENST00000607272 LINC00526Q96FQ7 95 aa8.86□□□□□ -0.99
MSH6-212ENST00000607272 TMEM243Q9BU79 118 aa8.86□□□□□ -0.99
MSH6-212ENST00000607272 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
MSH6-212ENST00000607272 Q9HAA7 133 aa8.86□□□□□ -0.99
MSH6-212ENST00000607272 SND1-IT1Q9HBX3 110 aa8.86□□□□□ -0.99
MSH6-212ENST00000607272 Q6ZTI0 123 aa8.85□□□□□ -0.99
MSH6-212ENST00000607272 MIR7-3HGQ8N6C7 128 aa8.85□□□□□ -0.99
MSH6-212ENST00000607272 LINC00337Q8N6G1 96 aa8.85□□□□□ -0.99
MSH6-212ENST00000607272 DOPEY1Q5JWR5 2465 aa8.85□□□□□ -0.99
MSH6-212ENST00000607272 TRAV25A0A0B4J276 109 aa8.85□□□□□ -0.99
MSH6-212ENST00000607272 H0YGX0 51 aa8.85□□□□□ -0.99
MSH6-212ENST00000607272 ODF3L2Q3SX64 289 aa8.85□□□□□ -0.99
MSH6-212ENST00000607272 C3orf56Q8N813 242 aa8.85□□□□□ -0.99
MSH6-212ENST00000607272 IGKV2-28A0A075B6P5 120 aa8.84□□□□□ -0.99
MSH6-212ENST00000607272 IGKV2D-28P01615 120 aa8.84□□□□□ -0.99
MSH6-212ENST00000607272 NRGNQ92686 78 aa8.84□□□□□ -0.99
MSH6-212ENST00000607272 MAPK1IP1LQ8NDC0 245 aa8.83□□□□□ -1
MSH6-212ENST00000607272 MXRA5Q9NR99 2828 aa8.83□□□□□ -1
MSH6-212ENST00000607272 COX7CP15954 63 aa8.82□□□□□ -1
MSH6-212ENST00000607272 SMIM11BQ8TCY0 68 aa8.82□□□□□ -1
MSH6-212ENST00000607272 MYO9AB2RTY4 2548 aa8.82□□□□□ -1
MSH6-212ENST00000607272 ZANQ9Y493 2812 aa8.82□□□□□ -1
MSH6-212ENST00000607272 ATOX1O00244 68 aa8.82□□□□□ -1
MSH6-212ENST00000607272 LINC00158P58513 81 aa8.82□□□□□ -1
MSH6-212ENST00000607272 HIST1H4AP62805 103 aaKnown RBP8.82□□□□□ -1
MSH6-212ENST00000607272 TOMM7Q9P0U1 55 aa8.82□□□□□ -1
MSH6-212ENST00000607272 C2CD3Q4AC94 2353 aa8.81□□□□□ -1
MSH6-212ENST00000607272 A0A087WYN8 130 aa8.81□□□□□ -1
MSH6-212ENST00000607272 IBA57-AS1B1ANH7 110 aa8.81□□□□□ -1
MSH6-212ENST00000607272 OBSCN-AS1Q96MR7 158 aa8.81□□□□□ -1
MSH6-212ENST00000607272 NOP10Q9NPE3 64 aaKnown RBP8.81□□□□□ -1
MSH6-212ENST00000607272 CCL18P55774 89 aa8.8□□□□□ -1
MSH6-212ENST00000607272 USP9XQ93008 2570 aaPredicted RBP8.8□□□□□ -1
MSH6-212ENST00000607272 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
MSH6-212ENST00000607272 FLNCQ14315 2725 aa8.79□□□□□ -1
MSH6-212ENST00000607272 IGHV4-31P0DP07 118 aa8.79□□□□□ -1
MSH6-212ENST00000607272 CRYGAP11844 174 aa8.79□□□□□ -1
MSH6-212ENST00000607272 C14orf132Q9NPU4 83 aa8.79□□□□□ -1
MSH6-212ENST00000607272 KLK5Q9Y337 293 aaPredicted RBP8.79□□□□□ -1
MSH6-212ENST00000607272 TRGV2A0A075B6R0 118 aa8.78□□□□□ -1
MSH6-212ENST00000607272 IGHV3OR16-9A0A0B4J2B5 98 aa8.78□□□□□ -1
MSH6-212ENST00000607272 LRRC75A-AS1Q8N1F1 130 aa8.78□□□□□ -1
MSH6-212ENST00000607272 C2orf48Q96LS8 159 aa8.78□□□□□ -1
MSH6-212ENST00000607272 Q6JHZ5 121 aa8.78□□□□□ -1
MSH6-212ENST00000607272 C16orf74Q96GX8 76 aa8.78□□□□□ -1
MSH6-212ENST00000607272 CFAP46Q8IYW2 2715 aa8.78□□□□□ -1
MSH6-212ENST00000607272 ANKRD17O75179 2603 aaKnown RBP8.78□□□□□ -1
MSH6-212ENST00000607272 A0A087WZ39 114 aa8.77□□□□□ -1.01
MSH6-212ENST00000607272 IGKV3OR2-268A0A0C4DH90 116 aa8.77□□□□□ -1.01
MSH6-212ENST00000607272 LECT2O14960 151 aa8.77□□□□□ -1.01
MSH6-212ENST00000607272 RPL18AQ02543 176 aaKnown RBP8.77□□□□□ -1.01
MSH6-212ENST00000607272 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
MSH6-212ENST00000607272 PAX4O43316 350 aa8.76□□□□□ -1.01
MSH6-212ENST00000607272 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
MSH6-212ENST00000607272 TRBV6-8A0A0A6YYG3 113 aa8.76□□□□□ -1.01
MSH6-212ENST00000607272 LOC100131303A0A0U1RQF7 123 aa8.76□□□□□ -1.01
MSH6-212ENST00000607272 CMC4P56277 68 aaPredicted RBP8.76□□□□□ -1.01
MSH6-212ENST00000607272 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
MSH6-212ENST00000607272 NOTCH3Q9UM47 2321 aa8.75□□□□□ -1.01
MSH6-212ENST00000607272 TRGV4A0A0C4DH28 118 aa8.75□□□□□ -1.01
MSH6-212ENST00000607272 A0A1B0GX51 115 aa8.75□□□□□ -1.01
MSH6-212ENST00000607272 PFN2P35080 140 aa8.75□□□□□ -1.01
MSH6-212ENST00000607272 OR13C6PQ8NH95 151 aa8.75□□□□□ -1.01
MSH6-212ENST00000607272 PKD1L2Q7Z442 2459 aa8.75□□□□□ -1.01
MSH6-212ENST00000607272 PLAC8L1A1L4L8 177 aa8.74□□□□□ -1.01
MSH6-212ENST00000607272 CSMD2Q7Z408 3487 aa8.74□□□□□ -1.01
MSH6-212ENST00000607272 LY6G6DO95868 133 aa8.74□□□□□ -1.01
MSH6-212ENST00000607272 GIG44P09565 113 aaPredicted RBP8.74□□□□□ -1.01
MSH6-212ENST00000607272 ORMDL1Q9P0S3 153 aa8.74□□□□□ -1.01
MSH6-212ENST00000607272 CHD6Q8TD26 2715 aa8.74□□□□□ -1.01
MSH6-212ENST00000607272 IGKV3D-7A0A0C4DH55 119 aa8.73□□□□□ -1.01
MSH6-212ENST00000607272 J3KT08 172 aa8.73□□□□□ -1.01
MSH6-212ENST00000607272 CCL24O00175 119 aa8.73□□□□□ -1.01
MSH6-212ENST00000607272 GYPEP15421 78 aa8.73□□□□□ -1.01
MSH6-212ENST00000607272 C6orf226Q5I0X4 101 aa8.73□□□□□ -1.01
MSH6-212ENST00000607272 POLQO75417 2590 aa8.73□□□□□ -1.01
MSH6-212ENST00000607272 NCR3O14931 201 aa8.73□□□□□ -1.01
MSH6-212ENST00000607272 C11orf44Q8N8P7 122 aa8.73□□□□□ -1.01
MSH6-212ENST00000607272 ACACBO00763 2458 aa8.72□□□□□ -1.01
MSH6-212ENST00000607272 TMEM86BQ8N661 226 aa8.72□□□□□ -1.01
MSH6-212ENST00000607272 SERP2Q8N6R1 65 aa8.72□□□□□ -1.01
MSH6-212ENST00000607272 RPS28P62857 69 aaKnown RBP8.72□□□□□ -1.01
MSH6-212ENST00000607272 MYO18BQ8IUG5 2567 aa8.71□□□□□ -1.01
MSH6-212ENST00000607272 LINC00959A0A1B0GUT2 108 aa8.71□□□□□ -1.02
MSH6-212ENST00000607272 WNK1Q9H4A3 2382 aa8.71□□□□□ -1.02
MSH6-212ENST00000607272 A0A1W2PRX2 142 aa8.7□□□□□ -1.02
MSH6-212ENST00000607272 hADV29S1A0JD25 119 aa8.7□□□□□ -1.02
MSH6-212ENST00000607272 SLPIP03973 132 aa8.7□□□□□ -1.02
MSH6-212ENST00000607272 CCKP06307 115 aa8.7□□□□□ -1.02
MSH6-212ENST00000607272 FHL2Q14192 279 aa8.7□□□□□ -1.02
MSH6-212ENST00000607272 S100A7L2Q5SY68 101 aa8.7□□□□□ -1.02
MSH6-212ENST00000607272 UTP20O75691 2785 aaKnown RBP8.7□□□□□ -1.02
MSH6-212ENST00000607272 TEX15Q9BXT5 2789 aa8.7□□□□□ -1.02
MSH6-212ENST00000607272 JMJD7-PLA2G4BH0Y9G9 81 aa8.7□□□□□ -1.02
MSH6-212ENST00000607272 AKAP9Q99996 3911 aa8.69□□□□□ -1.02
MSH6-212ENST00000607272 LINC01561Q8N1V8 128 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms