RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 MYH7P12883 1935 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 SMG6Q86US8 1419 aaKnown RBP-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 GOLGA4Q13439 2230 aaKnown RBP-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 FAM25AB3EWG3 89 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 FAM25CB3EWG5 89 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 FAM25GB3EWG6 89 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 IGLC1P0CG04 106 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 FGF7P21781 194 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 CCDC58Q4VC31 144 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 C10orf113Q5VZT2 155 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 MRPL54Q6P161 138 aaKnown RBP-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 TMEM263Q8WUH6 116 aaKnown RBP-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 LCN9Q8WX39 176 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 MAGI1Q96QZ7 1491 aaPredicted RBP-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 SHANK2Q9UPX8 1470 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 SCN7AQ01118 1682 aa-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 URB1O60287 2271 aaKnown RBP-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 PIGBOS1A0A0B4J2F0 54 aa-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 CHKB-CPT1BH3BT56 60 aa-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 SSSCA1O60232 199 aa-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 APOC2P02655 101 aa-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 APOC3P02656 99 aa-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 KRTAP6-2Q3LI66 62 aa-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 FAM223AQ8IWN6 122 aa-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 FLGP20930 4061 aaPredicted RBP-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 SVEP1Q4LDE5 3571 aa-0.55□□□□□ -2.5
SNORA28-201ENST00000606769 CUL7Q14999 1698 aa-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 KIAA0556O60303 1618 aa-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 S100A12P80511 92 aa-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 C8orf59Q8N0T1 100 aaPredicted RBP-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 PP6455Q8WZ26 134 aa-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 FAM107BQ9H098 131 aa-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 DPH3P1Q9H4G8 78 aa-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 NXT2Q9NPJ8 142 aaKnown RBP-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 EHBP1L1Q8N3D4 1523 aa-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 ADGRL2O95490 1459 aa-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 POLA1P09884 1462 aaPredicted RBP-0.56□□□□□ -2.5
SNORA28-201ENST00000606769 ROCK2O75116 1388 aaKnown RBP-0.57□□□□□ -2.5
SNORA28-201ENST00000606769 ZFHX3Q15911 3703 aa-0.57□□□□□ -2.5
SNORA28-201ENST00000606769 TRBV7-4A0A0J9YYF1 115 aa-0.57□□□□□ -2.5
SNORA28-201ENST00000606769 LOC285095A0A1B0GVY8 99 aa-0.57□□□□□ -2.5
SNORA28-201ENST00000606769 M0R2T5 61 aa-0.57□□□□□ -2.5
SNORA28-201ENST00000606769 MGPP08493 103 aa-0.57□□□□□ -2.5
SNORA28-201ENST00000606769 FAM167A-AS1Q96KT0 104 aa-0.57□□□□□ -2.5
SNORA28-201ENST00000606769 LINC01600Q96MT4 127 aa-0.57□□□□□ -2.5
SNORA28-201ENST00000606769 DNAJC13O75165 2243 aa-0.57□□□□□ -2.5
SNORA28-201ENST00000606769 CNOT1A5YKK6 2376 aaKnown RBP-0.57□□□□□ -2.5
SNORA28-201ENST00000606769 IQSEC2Q5JU85 1478 aa-0.58□□□□□ -2.5
SNORA28-201ENST00000606769 C1orf167Q5SNV9 1468 aa-0.58□□□□□ -2.5
SNORA28-201ENST00000606769 LOC730098B7Z3J9 87 aa-0.58□□□□□ -2.5
SNORA28-201ENST00000606769 HMGN1P05114 100 aa-0.58□□□□□ -2.5
SNORA28-201ENST00000606769 AKAIN1P0CW23 69 aa-0.58□□□□□ -2.5
SNORA28-201ENST00000606769 UBE2D3P61077 147 aa-0.58□□□□□ -2.5
SNORA28-201ENST00000606769 UBE2D2P62837 147 aa-0.58□□□□□ -2.5
SNORA28-201ENST00000606769 C9orf153Q5TBE3 101 aa-0.58□□□□□ -2.5
SNORA28-201ENST00000606769 DEFB105AQ8NG35 78 aa-0.58□□□□□ -2.5
SNORA28-201ENST00000606769 ARL2-SNX15V9GYD0 113 aa-0.58□□□□□ -2.5
SNORA28-201ENST00000606769 COL4A6Q14031 1691 aa-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 STAB2Q8WWQ8 2551 aa-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 UBE2L5PA0A1B0GUS4 154 aa-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 IFNGP01579 166 aa-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 UBE2L3P68036 154 aaKnown RBP-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 Q0VG73 95 aa-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 KRTAP19-8Q3LI54 63 aa-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 SFTA2Q6UW10 78 aa-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 FXYD6Q9H0Q3 95 aa-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 CRIPTQ9P021 101 aa-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 SCAPERQ9BY12 1400 aa-0.59□□□□□ -2.5
SNORA28-201ENST00000606769 NBEAL1Q6ZS30 2694 aa-0.6□□□□□ -2.5
SNORA28-201ENST00000606769 MYOM2P54296 1465 aa-0.6□□□□□ -2.5
SNORA28-201ENST00000606769 PCNX1Q96RV3 2341 aa-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 NALCNQ8IZF0 1738 aa-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 FMN2Q9NZ56 1722 aa-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 DIP2CQ9Y2E4 1556 aa-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 NAIPQ13075 1403 aa-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 A0A1B0GV90 55 aa-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 FAM223BA6NKX1 122 aa-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 SPRR2AP35326 72 aa-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 UBA52P62987 128 aaKnown RBP-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 C1orf54Q8WWF1 131 aa-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 TSC22D3Q99576 134 aa-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 KTN1Q86UP2 1357 aaKnown RBP-0.6□□□□□ -2.51
SNORA28-201ENST00000606769 PLEKHH2Q8IVE3 1493 aa-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 NLRP1Q9C000 1473 aa-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 MRC2Q9UBG0 1479 aa-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 KMT2CQ8NEZ4 4911 aaKnown RBP-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 SPINK4O60575 86 aa-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 GNG11P61952 73 aa-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 UQCR10Q9UDW1 63 aa-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 XRN1Q8IZH2 1706 aaKnown RBP-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 MARF1Q9Y4F3 1742 aaKnown RBP-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 LAMA5O15230 3695 aa-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 HERC1Q15751 4861 aa-0.61□□□□□ -2.51
SNORA28-201ENST00000606769 SLIT1O75093 1534 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 SETD2Q9BYW2 2564 aaPredicted RBP-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 TOP2BQ02880 1626 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 DLEU1O43261 78 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 SPRR2EP22531 72 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 WHAMMP3Q1A5X7 153 aa-0.62□□□□□ -2.51
SNORA28-201ENST00000606769 FDCSPQ8NFU4 85 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms