RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 HIST1H2BNQ99877 126 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 HIST1H2BMQ99879 126 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 PGPEP1Q9NXJ5 209 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 ATP5LO75964 103 aa13.7□□□□□ -0.22
GRAMD1A-214ENST00000603907 WFDC2Q14508 124 aa13.7□□□□□ -0.22
GRAMD1A-214ENST00000603907 CDPF1Q6NVV7 123 aa13.7□□□□□ -0.22
GRAMD1A-214ENST00000603907 LINC00173Q6ZV60 143 aa13.7□□□□□ -0.22
GRAMD1A-214ENST00000603907 USP17L23D6RBM5 183 aa13.69□□□□□ -0.22
GRAMD1A-214ENST00000603907 LECT2O14960 151 aa13.69□□□□□ -0.22
GRAMD1A-214ENST00000603907 SERF1AO75920 110 aa13.69□□□□□ -0.22
GRAMD1A-214ENST00000603907 UBE2D1P51668 147 aa13.69□□□□□ -0.22
GRAMD1A-214ENST00000603907 PMCHL1Q16048 86 aa13.69□□□□□ -0.22
GRAMD1A-214ENST00000603907 SEC11AP67812 179 aa13.68□□□□□ -0.22
GRAMD1A-214ENST00000603907 FAM19A3Q7Z5A8 133 aa13.68□□□□□ -0.22
GRAMD1A-214ENST00000603907 EPM2AB3EWF7 344 aa13.67□□□□□ -0.22
GRAMD1A-214ENST00000603907 COX7A2LO14548 114 aa13.66□□□□□ -0.22
GRAMD1A-214ENST00000603907 LINC00310P59036 64 aa13.66□□□□□ -0.22
GRAMD1A-214ENST00000603907 PMVKQ15126 192 aa13.66□□□□□ -0.22
GRAMD1A-214ENST00000603907 LINC00242Q5T6M2 205 aa13.66□□□□□ -0.22
GRAMD1A-214ENST00000603907 APOBP04114 4563 aaKnown RBP13.65□□□□□ -0.22
GRAMD1A-214ENST00000603907 IGHV3OR16-9A0A0B4J2B5 98 aa13.65□□□□□ -0.22
GRAMD1A-214ENST00000603907 KRTAP10-2P60368 255 aa13.65□□□□□ -0.22
GRAMD1A-214ENST00000603907 IGHV1-58A0A0C4DH39 117 aa13.64□□□□□ -0.23
GRAMD1A-214ENST00000603907 ZC2HC1BQ5TFG8 222 aa13.64□□□□□ -0.23
GRAMD1A-214ENST00000603907 CST9LQ9H4G1 147 aa13.64□□□□□ -0.23
GRAMD1A-214ENST00000603907 APOMO95445 188 aa13.63□□□□□ -0.23
GRAMD1A-214ENST00000603907 MALP21145 153 aa13.63□□□□□ -0.23
GRAMD1A-214ENST00000603907 FAM19A2Q8N3H0 131 aa13.63□□□□□ -0.23
GRAMD1A-214ENST00000603907 C15orf56Q8N910 161 aa13.63□□□□□ -0.23
GRAMD1A-214ENST00000603907 DMBT1Q9UGM3 2413 aaPredicted RBP13.63□□□□□ -0.23
GRAMD1A-214ENST00000603907 HERC1Q15751 4861 aa13.63□□□□□ -0.23
GRAMD1A-214ENST00000603907 PRSS1P07477 247 aa13.62□□□□□ -0.23
GRAMD1A-214ENST00000603907 HERVK_113P63121 156 aa13.62□□□□□ -0.23
GRAMD1A-214ENST00000603907 GVQW2A0A096LPI5 108 aaPredicted RBP13.61□□□□□ -0.23
GRAMD1A-214ENST00000603907 IGLV5-52A0A0A0MRZ9 124 aa13.61□□□□□ -0.23
GRAMD1A-214ENST00000603907 INAFM2P0DMQ5 153 aa13.61□□□□□ -0.23
GRAMD1A-214ENST00000603907 COA6Q5JTJ3 125 aaKnown RBP13.61□□□□□ -0.23
GRAMD1A-214ENST00000603907 LINC01561Q8N1V8 128 aa13.61□□□□□ -0.23
GRAMD1A-214ENST00000603907 IFI27L1Q96BM0 104 aa13.61□□□□□ -0.23
GRAMD1A-214ENST00000603907 DNAH5Q8TE73 4624 aa13.6□□□□□ -0.23
GRAMD1A-214ENST00000603907 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.6□□□□□ -0.23
GRAMD1A-214ENST00000603907 A0A087WZ39 114 aa13.6□□□□□ -0.23
GRAMD1A-214ENST00000603907 hDV102S1A0JD36 115 aa13.6□□□□□ -0.23
GRAMD1A-214ENST00000603907 NUPR1O60356 82 aa13.6□□□□□ -0.23
GRAMD1A-214ENST00000603907 LEPROTL1O95214 131 aa13.6□□□□□ -0.23
GRAMD1A-214ENST00000603907 C5orf38Q86SI9 138 aa13.6□□□□□ -0.23
GRAMD1A-214ENST00000603907 GEMIN7Q9H840 131 aaKnown RBP13.6□□□□□ -0.23
GRAMD1A-214ENST00000603907 TINCRA0A1B0GVN0 87 aa13.59□□□□□ -0.23
GRAMD1A-214ENST00000603907 COX6A2Q02221 97 aa13.59□□□□□ -0.23
GRAMD1A-214ENST00000603907 HSPB8Q9UJY1 196 aa13.59□□□□□ -0.23
GRAMD1A-214ENST00000603907 NDUFA6P56556 154 aa13.58□□□□□ -0.24
GRAMD1A-214ENST00000603907 PACRGQ96M98 296 aaPredicted RBP13.58□□□□□ -0.24
GRAMD1A-214ENST00000603907 TRAV12-1A0A0B4J245 112 aa13.57□□□□□ -0.24
GRAMD1A-214ENST00000603907 A0A0J9YXV3 536 aa13.57□□□□□ -0.24
GRAMD1A-214ENST00000603907 CNBPP62633 177 aaKnown RBP13.57□□□□□ -0.24
GRAMD1A-214ENST00000603907 OR10D4PQ8NGN7 298 aa13.57□□□□□ -0.24
GRAMD1A-214ENST00000603907 IGHV3-64A0A075B6Q5 118 aa13.55□□□□□ -0.24
GRAMD1A-214ENST00000603907 IGLV5-45A0A087WSX0 123 aa13.55□□□□□ -0.24
GRAMD1A-214ENST00000603907 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.55□□□□□ -0.24
GRAMD1A-214ENST00000603907 ZNF561-AS1K7EIQ3 104 aa13.55□□□□□ -0.24
GRAMD1A-214ENST00000603907 IGLC3P0DOY3 106 aa13.55□□□□□ -0.24
GRAMD1A-214ENST00000603907 GCSHP23434 173 aa13.55□□□□□ -0.24
GRAMD1A-214ENST00000603907 HIGD2BQ4VC39 106 aa13.55□□□□□ -0.24
GRAMD1A-214ENST00000603907 CDKN2A-AS1Q9UH64 79 aa13.53□□□□□ -0.24
GRAMD1A-214ENST00000603907 F8WDY8 70 aa13.52□□□□□ -0.25
GRAMD1A-214ENST00000603907 FUSP35637 526 aaKnown RBP eCLIP13.52□□□□□ -0.25
GRAMD1A-214ENST00000603907 LINC00469Q8N7U9 141 aa13.52□□□□□ -0.25
GRAMD1A-214ENST00000603907 ORAOV1Q8WV07 137 aa13.52□□□□□ -0.25
GRAMD1A-214ENST00000603907 C2orf48Q96LS8 159 aa13.52□□□□□ -0.25
GRAMD1A-214ENST00000603907 CHTOPQ9Y3Y2 248 aaKnown RBP13.52□□□□□ -0.25
GRAMD1A-214ENST00000603907 IGLV4-69A0A075B6H9 119 aa13.51□□□□□ -0.25
GRAMD1A-214ENST00000603907 FABP4P15090 132 aa13.51□□□□□ -0.25
GRAMD1A-214ENST00000603907 SPAG11BQ08648 103 aa13.51□□□□□ -0.25
GRAMD1A-214ENST00000603907 Q5VSD8 79 aa13.51□□□□□ -0.25
GRAMD1A-214ENST00000603907 C9orf163Q8N9P6 203 aa13.51□□□□□ -0.25
GRAMD1A-214ENST00000603907 CHAC1Q9BUX1 264 aa13.51□□□□□ -0.25
GRAMD1A-214ENST00000603907 H3BRM9 83 aa13.5□□□□□ -0.25
GRAMD1A-214ENST00000603907 SLPIP03973 132 aa13.5□□□□□ -0.25
GRAMD1A-214ENST00000603907 F8VRH5 84 aa13.49□□□□□ -0.25
GRAMD1A-214ENST00000603907 MAP1LC3CQ9BXW4 147 aa13.49□□□□□ -0.25
GRAMD1A-214ENST00000603907 XGP55808 180 aa13.47□□□□□ -0.25
GRAMD1A-214ENST00000603907 SYCNQ0VAF6 134 aa13.47□□□□□ -0.25
GRAMD1A-214ENST00000603907 ZNF22P17026 224 aaPredicted RBP13.46□□□□□ -0.25
GRAMD1A-214ENST00000603907 KRTAP10-1P60331 282 aa13.46□□□□□ -0.25
GRAMD1A-214ENST00000603907 ODF1Q14990 250 aa13.46□□□□□ -0.25
GRAMD1A-214ENST00000603907 CARD19Q96LW7 228 aa13.46□□□□□ -0.25
GRAMD1A-214ENST00000603907 CAMK2N2Q96S95 79 aa13.46□□□□□ -0.25
GRAMD1A-214ENST00000603907 MRPL35Q9NZE8 188 aaKnown RBP13.46□□□□□ -0.25
GRAMD1A-214ENST00000603907 PKIGQ9Y2B9 76 aa13.46□□□□□ -0.25
GRAMD1A-214ENST00000603907 C11orf86A6NJI1 115 aa13.45□□□□□ -0.26
GRAMD1A-214ENST00000603907 SMIM1B2RUZ4 78 aa13.45□□□□□ -0.26
GRAMD1A-214ENST00000603907 S100A6P06703 90 aa13.45□□□□□ -0.26
GRAMD1A-214ENST00000603907 PRSS2P07478 247 aa13.45□□□□□ -0.26
GRAMD1A-214ENST00000603907 KIAA0087Q14695 138 aa13.45□□□□□ -0.26
GRAMD1A-214ENST00000603907 Q8IZM0 81 aa13.45□□□□□ -0.26
GRAMD1A-214ENST00000603907 LINC00526Q96FQ7 95 aa13.45□□□□□ -0.26
GRAMD1A-214ENST00000603907 H0Y8G0 127 aa13.43□□□□□ -0.26
GRAMD1A-214ENST00000603907 NDUFA1O15239 70 aa13.43□□□□□ -0.26
GRAMD1A-214ENST00000603907 PLNP26678 52 aa13.42□□□□□ -0.26
GRAMD1A-214ENST00000603907 RNF151Q2KHN1 245 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms