RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.74
PPFIA3-213ENST00000602905 IGHV3-64A0A075B6Q5 118 aa10.39□□□□□ -0.75
PPFIA3-213ENST00000602905 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.39□□□□□ -0.75
PPFIA3-213ENST00000602905 LINC00242Q5T6M2 205 aa10.39□□□□□ -0.75
PPFIA3-213ENST00000602905 LINC00173Q6ZV60 143 aa10.39□□□□□ -0.75
PPFIA3-213ENST00000602905 BAGE3Q86Y29 109 aa10.39□□□□□ -0.75
PPFIA3-213ENST00000602905 CHCHD1Q96BP2 118 aaKnown RBP10.39□□□□□ -0.75
PPFIA3-213ENST00000602905 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
PPFIA3-213ENST00000602905 ZC2HC1BQ5TFG8 222 aa10.38□□□□□ -0.75
PPFIA3-213ENST00000602905 URB1-AS1Q96HZ7 61 aa10.38□□□□□ -0.75
PPFIA3-213ENST00000602905 SCO1O75880 301 aa10.37□□□□□ -0.75
PPFIA3-213ENST00000602905 OR10D4PQ8NGN7 298 aa10.37□□□□□ -0.75
PPFIA3-213ENST00000602905 GEMIN7Q9H840 131 aaKnown RBP10.37□□□□□ -0.75
PPFIA3-213ENST00000602905 PKIGQ9Y2B9 76 aa10.37□□□□□ -0.75
PPFIA3-213ENST00000602905 ATP5LO75964 103 aa10.36□□□□□ -0.75
PPFIA3-213ENST00000602905 HERVK_113P63121 156 aa10.36□□□□□ -0.75
PPFIA3-213ENST00000602905 PMVKQ15126 192 aa10.36□□□□□ -0.75
PPFIA3-213ENST00000602905 PMCHL1Q16048 86 aa10.36□□□□□ -0.75
PPFIA3-213ENST00000602905 ORAOV1Q8WV07 137 aa10.36□□□□□ -0.75
PPFIA3-213ENST00000602905 A0A087WZ39 114 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 SLPIP03973 132 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 S100A1P23297 94 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 XGP55808 180 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 NDUFA6P56556 154 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 COX6A2Q02221 97 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 SPAG11BQ08648 103 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 SYCNQ0VAF6 134 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 FAM19A3Q7Z5A8 133 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 LINC00526Q96FQ7 95 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 CARD19Q96LW7 228 aa10.35□□□□□ -0.75
PPFIA3-213ENST00000602905 IGLV4-69A0A075B6H9 119 aa10.34□□□□□ -0.75
PPFIA3-213ENST00000602905 HSBP1O75506 76 aa10.34□□□□□ -0.75
PPFIA3-213ENST00000602905 Q6ZSA8 131 aa10.34□□□□□ -0.75
PPFIA3-213ENST00000602905 LINC01561Q8N1V8 128 aa10.34□□□□□ -0.75
PPFIA3-213ENST00000602905 C2orf48Q96LS8 159 aa10.34□□□□□ -0.75
PPFIA3-213ENST00000602905 CAMK2N2Q96S95 79 aa10.34□□□□□ -0.75
PPFIA3-213ENST00000602905 CST9LQ9H4G1 147 aa10.34□□□□□ -0.75
PPFIA3-213ENST00000602905 FAM30AQ9NZY2 134 aa10.34□□□□□ -0.75
PPFIA3-213ENST00000602905 KIAA1109Q2LD37 5005 aa10.34□□□□□ -0.75
PPFIA3-213ENST00000602905 A0A096LNJ9 63 aa10.33□□□□□ -0.76
PPFIA3-213ENST00000602905 F8WDY8 70 aa10.33□□□□□ -0.76
PPFIA3-213ENST00000602905 PACRGQ96M98 296 aaPredicted RBP10.33□□□□□ -0.76
PPFIA3-213ENST00000602905 A0A0J9YXV3 536 aa10.32□□□□□ -0.76
PPFIA3-213ENST00000602905 PDZD11Q5EBL8 140 aa10.32□□□□□ -0.76
PPFIA3-213ENST00000602905 SDIM1Q6ZPB5 146 aa10.32□□□□□ -0.76
PPFIA3-213ENST00000602905 TINCRA0A1B0GVN0 87 aa10.31□□□□□ -0.76
PPFIA3-213ENST00000602905 PRSS2P07478 247 aa10.31□□□□□ -0.76
PPFIA3-213ENST00000602905 LINC00469Q8N7U9 141 aa10.31□□□□□ -0.76
PPFIA3-213ENST00000602905 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
PPFIA3-213ENST00000602905 NDUFA1O15239 70 aa10.3□□□□□ -0.76
PPFIA3-213ENST00000602905 HAMPP81172 84 aa10.3□□□□□ -0.76
PPFIA3-213ENST00000602905 CHAC1Q9BUX1 264 aa10.3□□□□□ -0.76
PPFIA3-213ENST00000602905 APOBP04114 4563 aaKnown RBP10.29□□□□□ -0.76
PPFIA3-213ENST00000602905 Q6ZRU5 148 aa10.29□□□□□ -0.76
PPFIA3-213ENST00000602905 CDKN2A-AS1Q9UH64 79 aa10.29□□□□□ -0.76
PPFIA3-213ENST00000602905 RYR1P21817 5038 aa10.29□□□□□ -0.76
PPFIA3-213ENST00000602905 SERF1AO75920 110 aa10.28□□□□□ -0.76
PPFIA3-213ENST00000602905 SCXQ7RTU7 201 aa10.28□□□□□ -0.76
PPFIA3-213ENST00000602905 Q8N1X5 172 aa10.28□□□□□ -0.76
PPFIA3-213ENST00000602905 IFI27L1Q96BM0 104 aa10.28□□□□□ -0.76
PPFIA3-213ENST00000602905 TOMM7Q9P0U1 55 aa10.28□□□□□ -0.76
PPFIA3-213ENST00000602905 H3BRM9 83 aa10.27□□□□□ -0.77
PPFIA3-213ENST00000602905 ATP6V1G1O75348 118 aa10.27□□□□□ -0.77
PPFIA3-213ENST00000602905 FAM19A2Q8N3H0 131 aa10.27□□□□□ -0.77
PPFIA3-213ENST00000602905 LINC00474Q9P2X8 69 aa10.27□□□□□ -0.77
PPFIA3-213ENST00000602905 LOC107984640A0A0U1RRK4 108 aa10.26□□□□□ -0.77
PPFIA3-213ENST00000602905 FAM229AH3BQW9 127 aa10.26□□□□□ -0.77
PPFIA3-213ENST00000602905 SMR3BP02814 79 aaPredicted RBP10.26□□□□□ -0.77
PPFIA3-213ENST00000602905 RNF151Q2KHN1 245 aa10.26□□□□□ -0.77
PPFIA3-213ENST00000602905 C6orf226Q5I0X4 101 aa10.26□□□□□ -0.77
PPFIA3-213ENST00000602905 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
PPFIA3-213ENST00000602905 MRPL35Q9NZE8 188 aaKnown RBP10.26□□□□□ -0.77
PPFIA3-213ENST00000602905 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.26□□□□□ -0.77
PPFIA3-213ENST00000602905 HSPG2P98160 4391 aa10.26□□□□□ -0.77
PPFIA3-213ENST00000602905 HERC2O95714 4834 aa10.25□□□□□ -0.77
PPFIA3-213ENST00000602905 IGLV5-45A0A087WSX0 123 aa10.25□□□□□ -0.77
PPFIA3-213ENST00000602905 IGKV2-24A0A0C4DH68 120 aa10.25□□□□□ -0.77
PPFIA3-213ENST00000602905 LEPROTL1O95214 131 aa10.25□□□□□ -0.77
PPFIA3-213ENST00000602905 IGLC3P0DOY3 106 aa10.25□□□□□ -0.77
PPFIA3-213ENST00000602905 CKS1BP61024 79 aa10.25□□□□□ -0.77
PPFIA3-213ENST00000602905 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
PPFIA3-213ENST00000602905 CHTF8P0CG12 524 aa10.24□□□□□ -0.77
PPFIA3-213ENST00000602905 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
PPFIA3-213ENST00000602905 MAJINQ3KP22 176 aa10.24□□□□□ -0.77
PPFIA3-213ENST00000602905 Q8IZM0 81 aa10.24□□□□□ -0.77
PPFIA3-213ENST00000602905 HSPB8Q9UJY1 196 aa10.24□□□□□ -0.77
PPFIA3-213ENST00000602905 CHTOPQ9Y3Y2 248 aaKnown RBP10.24□□□□□ -0.77
PPFIA3-213ENST00000602905 DNAH8Q96JB1 4490 aa10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 TRAV12-1A0A0B4J245 112 aa10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 HIST1H2BKO60814 126 aa10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 HIST1H2BJP06899 126 aa10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 HIST1H2BOP23527 126 aa10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 HIST1H2BBP33778 126 aa10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 HIST1H2BDP58876 126 aa10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 HIST1H2BCP62807 126 aa10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 HIST2H2BEQ16778 126 aa10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 UNQ6190/PRO20217Q6UXQ8 127 aa10.23□□□□□ -0.77
PPFIA3-213ENST00000602905 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms