RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 ANGP03950 147 aaKnown RBP12.38□□□□□ -0.43
PPFIA3-210ENST00000602800 RPL39P62891 51 aaKnown RBP12.38□□□□□ -0.43
PPFIA3-210ENST00000602800 UBE2D4Q9Y2X8 147 aa12.38□□□□□ -0.43
PPFIA3-210ENST00000602800 CSDC2Q9Y534 153 aaKnown RBP12.38□□□□□ -0.43
PPFIA3-210ENST00000602800 TOMM6Q96B49 74 aa12.37□□□□□ -0.43
PPFIA3-210ENST00000602800 SERF1AO75920 110 aa12.36□□□□□ -0.43
PPFIA3-210ENST00000602800 PYGO1Q9Y3Y4 419 aa12.36□□□□□ -0.43
PPFIA3-210ENST00000602800 IGLV4-60A0A075B6I1 120 aa12.35□□□□□ -0.43
PPFIA3-210ENST00000602800 HBDP02042 147 aa12.35□□□□□ -0.43
PPFIA3-210ENST00000602800 PRSS1P07477 247 aa12.35□□□□□ -0.43
PPFIA3-210ENST00000602800 MIAQ16674 131 aa12.35□□□□□ -0.43
PPFIA3-210ENST00000602800 C9orf163Q8N9P6 203 aa12.35□□□□□ -0.43
PPFIA3-210ENST00000602800 NPSP0C0P6 89 aa12.34□□□□□ -0.43
PPFIA3-210ENST00000602800 NDUFA6P56556 154 aa12.34□□□□□ -0.43
PPFIA3-210ENST00000602800 ZNF664Q8N3J9 261 aa12.34□□□□□ -0.43
PPFIA3-210ENST00000602800 SCGB3A1Q96QR1 104 aa12.34□□□□□ -0.43
PPFIA3-210ENST00000602800 MRPS36P82909 103 aaKnown RBP12.33□□□□□ -0.44
PPFIA3-210ENST00000602800 PAPPA-AS1Q5QFB9 102 aa12.33□□□□□ -0.44
PPFIA3-210ENST00000602800 ERASQ7Z444 233 aa12.33□□□□□ -0.44
PPFIA3-210ENST00000602800 LINC00269Q8N2A0 174 aa12.33□□□□□ -0.44
PPFIA3-210ENST00000602800 TMEM141Q96I45 108 aa12.33□□□□□ -0.44
PPFIA3-210ENST00000602800 CDC42SE2Q9NRR3 84 aa12.33□□□□□ -0.44
PPFIA3-210ENST00000602800 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.33□□□□□ -0.44
PPFIA3-210ENST00000602800 PMCHL1Q16048 86 aa12.32□□□□□ -0.44
PPFIA3-210ENST00000602800 Q6ZN92 141 aa12.32□□□□□ -0.44
PPFIA3-210ENST00000602800 Q6ZRU5 148 aa12.32□□□□□ -0.44
PPFIA3-210ENST00000602800 TIMM17AQ99595 171 aa12.32□□□□□ -0.44
PPFIA3-210ENST00000602800 REG3AQ06141 175 aa12.31□□□□□ -0.44
PPFIA3-210ENST00000602800 COA6Q5JTJ3 125 aaKnown RBP12.31□□□□□ -0.44
PPFIA3-210ENST00000602800 PRR34Q9NV39 138 aa12.31□□□□□ -0.44
PPFIA3-210ENST00000602800 IGIPA6NJ69 53 aa12.3□□□□□ -0.44
PPFIA3-210ENST00000602800 MT1HL1P0DM35 61 aa12.3□□□□□ -0.44
PPFIA3-210ENST00000602800 LINC00310P59036 64 aa12.3□□□□□ -0.44
PPFIA3-210ENST00000602800 Q6ZUT4 128 aa12.3□□□□□ -0.44
PPFIA3-210ENST00000602800 IGLV4-3A0A075B6K6 122 aa12.29□□□□□ -0.44
PPFIA3-210ENST00000602800 A0A096LNJ9 63 aa12.29□□□□□ -0.44
PPFIA3-210ENST00000602800 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.29□□□□□ -0.44
PPFIA3-210ENST00000602800 ATP5LO75964 103 aa12.29□□□□□ -0.44
PPFIA3-210ENST00000602800 PDZD11Q5EBL8 140 aa12.29□□□□□ -0.44
PPFIA3-210ENST00000602800 CLPSL2Q6UWE3 100 aa12.29□□□□□ -0.44
PPFIA3-210ENST00000602800 SDIM1Q6ZPB5 146 aa12.29□□□□□ -0.44
PPFIA3-210ENST00000602800 FAM19A2Q8N3H0 131 aa12.29□□□□□ -0.44
PPFIA3-210ENST00000602800 VCX2Q9H322 139 aa12.29□□□□□ -0.44
PPFIA3-210ENST00000602800 TRAV8-4A0A0B4J246 113 aa12.28□□□□□ -0.44
PPFIA3-210ENST00000602800 IGKV3OR2-268A0A0C4DH90 116 aa12.28□□□□□ -0.44
PPFIA3-210ENST00000602800 PANO1I0J062 215 aa12.28□□□□□ -0.44
PPFIA3-210ENST00000602800 NUPR1O60356 82 aa12.28□□□□□ -0.44
PPFIA3-210ENST00000602800 S100A6P06703 90 aa12.28□□□□□ -0.44
PPFIA3-210ENST00000602800 TEX43Q6ZNM6 134 aa12.28□□□□□ -0.44
PPFIA3-210ENST00000602800 OPRPNQ99935 248 aaPredicted RBP12.28□□□□□ -0.44
PPFIA3-210ENST00000602800 SS18Q15532 418 aa12.27□□□□□ -0.45
PPFIA3-210ENST00000602800 DPH3Q96FX2 82 aa12.27□□□□□ -0.45
PPFIA3-210ENST00000602800 C2orf88Q9BSF0 95 aa12.27□□□□□ -0.45
PPFIA3-210ENST00000602800 CCL25O15444 150 aa12.26□□□□□ -0.45
PPFIA3-210ENST00000602800 RNASE13Q5GAN3 156 aaKnown RBP12.26□□□□□ -0.45
PPFIA3-210ENST00000602800 IFITM10A6NMD0 228 aa12.25□□□□□ -0.45
PPFIA3-210ENST00000602800 LEPROTL1O95214 131 aa12.25□□□□□ -0.45
PPFIA3-210ENST00000602800 KRTAP26-1Q6PEX3 210 aa12.25□□□□□ -0.45
PPFIA3-210ENST00000602800 HSPB8Q9UJY1 196 aa12.25□□□□□ -0.45
PPFIA3-210ENST00000602800 LINC00959A0A1B0GUT2 108 aa12.24□□□□□ -0.45
PPFIA3-210ENST00000602800 CNBPP62633 177 aaKnown RBP12.24□□□□□ -0.45
PPFIA3-210ENST00000602800 FAM104AQ969W3 186 aa12.24□□□□□ -0.45
PPFIA3-210ENST00000602800 AMELXQ99217 191 aa12.24□□□□□ -0.45
PPFIA3-210ENST00000602800 TMA7Q9Y2S6 64 aaKnown RBP12.24□□□□□ -0.45
PPFIA3-210ENST00000602800 TRAV13-1A0A0B4J241 112 aa12.23□□□□□ -0.45
PPFIA3-210ENST00000602800 hDV102S1A0JD36 115 aa12.23□□□□□ -0.45
PPFIA3-210ENST00000602800 CIRBPQ14011 172 aaKnown RBP12.23□□□□□ -0.45
PPFIA3-210ENST00000602800 PMVKQ15126 192 aa12.23□□□□□ -0.45
PPFIA3-210ENST00000602800 IFI27L1Q96BM0 104 aa12.23□□□□□ -0.45
PPFIA3-210ENST00000602800 IGHV3-64A0A075B6Q5 118 aa12.22□□□□□ -0.45
PPFIA3-210ENST00000602800 PACRGQ96M98 296 aaPredicted RBP12.22□□□□□ -0.45
PPFIA3-210ENST00000602800 LRP2P98164 4655 aa12.22□□□□□ -0.45
PPFIA3-210ENST00000602800 IGLV10-54A0A075B6I4 117 aa12.21□□□□□ -0.45
PPFIA3-210ENST00000602800 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.21□□□□□ -0.45
PPFIA3-210ENST00000602800 FABP4P15090 132 aa12.21□□□□□ -0.45
PPFIA3-210ENST00000602800 CHCHD10Q8WYQ3 142 aaPredicted RBP12.21□□□□□ -0.45
PPFIA3-210ENST00000602800 CST9LQ9H4G1 147 aa12.2□□□□□ -0.46
PPFIA3-210ENST00000602800 RNF213Q63HN8 5207 aa12.2□□□□□ -0.46
PPFIA3-210ENST00000602800 A0A087WYN8 130 aa12.19□□□□□ -0.46
PPFIA3-210ENST00000602800 S100A2P29034 98 aa12.19□□□□□ -0.46
PPFIA3-210ENST00000602800 SEC11AP67812 179 aa12.19□□□□□ -0.46
PPFIA3-210ENST00000602800 ZC2HC1BQ5TFG8 222 aa12.19□□□□□ -0.46
PPFIA3-210ENST00000602800 LINC00173Q6ZV60 143 aa12.19□□□□□ -0.46
PPFIA3-210ENST00000602800 GAGE12HA6NDE8 117 aa12.18□□□□□ -0.46
PPFIA3-210ENST00000602800 XCL1P47992 114 aa12.18□□□□□ -0.46
PPFIA3-210ENST00000602800 UBE2D1P51668 147 aa12.18□□□□□ -0.46
PPFIA3-210ENST00000602800 CD164L2Q6UWJ8 174 aa12.18□□□□□ -0.46
PPFIA3-210ENST00000602800 MAP1LC3CQ9BXW4 147 aa12.18□□□□□ -0.46
PPFIA3-210ENST00000602800 CHTF8P0CG12 524 aa12.17□□□□□ -0.46
PPFIA3-210ENST00000602800 C7orf33Q8WU49 177 aa12.17□□□□□ -0.46
PPFIA3-210ENST00000602800 TNXBP22105 4242 aa12.17□□□□□ -0.46
PPFIA3-210ENST00000602800 TRAV12-1A0A0B4J245 112 aa12.16□□□□□ -0.46
PPFIA3-210ENST00000602800 SNRPEP62304 92 aaKnown RBP12.16□□□□□ -0.46
PPFIA3-210ENST00000602800 HIST3H2BBQ8N257 126 aa12.16□□□□□ -0.46
PPFIA3-210ENST00000602800 SPACA4Q8TDM5 124 aa12.16□□□□□ -0.46
PPFIA3-210ENST00000602800 FAM19A3Q7Z5A8 133 aa12.15□□□□□ -0.46
PPFIA3-210ENST00000602800 GEMIN7Q9H840 131 aaKnown RBP12.15□□□□□ -0.46
PPFIA3-210ENST00000602800 SLPIP03973 132 aa12.14□□□□□ -0.47
PPFIA3-210ENST00000602800 HERVK_113P63121 156 aa12.14□□□□□ -0.47
PPFIA3-210ENST00000602800 LINC00242Q5T6M2 205 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms