RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 PFN2P35080 140 aa11.26□□□□□ -0.61
PPFIA3-206ENST00000602655 FAM223AQ8IWN6 122 aa11.26□□□□□ -0.61
PPFIA3-206ENST00000602655 ZNF702PQ9H963 129 aa11.26□□□□□ -0.61
PPFIA3-206ENST00000602655 INAFM2P0DMQ5 153 aa11.26□□□□□ -0.61
PPFIA3-206ENST00000602655 POLR2KP53803 58 aaKnown RBP11.26□□□□□ -0.61
PPFIA3-206ENST00000602655 MIAQ16674 131 aa11.26□□□□□ -0.61
PPFIA3-206ENST00000602655 DEFB121Q5J5C9 76 aa11.25□□□□□ -0.61
PPFIA3-206ENST00000602655 MGAM2Q2M2H8 2515 aa11.25□□□□□ -0.61
PPFIA3-206ENST00000602655 C9orf47Q6ZRZ4 202 aa11.25□□□□□ -0.61
PPFIA3-206ENST00000602655 IGHV3-73A0A0B4J1V6 119 aa11.24□□□□□ -0.61
PPFIA3-206ENST00000602655 CXCL5P42830 114 aa11.24□□□□□ -0.61
PPFIA3-206ENST00000602655 C14orf132Q9NPU4 83 aa11.24□□□□□ -0.61
PPFIA3-206ENST00000602655 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
PPFIA3-206ENST00000602655 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
PPFIA3-206ENST00000602655 DCANP1Q8TF63 244 aa11.24□□□□□ -0.61
PPFIA3-206ENST00000602655 USMG5Q96IX5 58 aa11.24□□□□□ -0.61
PPFIA3-206ENST00000602655 TMEM243Q9BU79 118 aa11.24□□□□□ -0.61
PPFIA3-206ENST00000602655 C5orf38Q86SI9 138 aa11.23□□□□□ -0.61
PPFIA3-206ENST00000602655 LY6G6DO95868 133 aa11.23□□□□□ -0.61
PPFIA3-206ENST00000602655 C20orf197Q8N268 126 aa11.23□□□□□ -0.61
PPFIA3-206ENST00000602655 PSMB8P28062 276 aa11.22□□□□□ -0.61
PPFIA3-206ENST00000602655 DYNLRB2Q8TF09 96 aa11.22□□□□□ -0.61
PPFIA3-206ENST00000602655 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
PPFIA3-206ENST00000602655 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
PPFIA3-206ENST00000602655 LINC00336Q6ZUF6 198 aa11.22□□□□□ -0.61
PPFIA3-206ENST00000602655 APRG1Q8IVJ8 170 aa11.22□□□□□ -0.61
PPFIA3-206ENST00000602655 COX7A2LO14548 114 aa11.21□□□□□ -0.61
PPFIA3-206ENST00000602655 NDUFA4O00483 81 aa11.21□□□□□ -0.62
PPFIA3-206ENST00000602655 ZNF415Q09FC8 603 aa11.21□□□□□ -0.62
PPFIA3-206ENST00000602655 ZFAND2AQ8N6M9 145 aa11.21□□□□□ -0.62
PPFIA3-206ENST00000602655 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.62
PPFIA3-206ENST00000602655 IGLV4-3A0A075B6K6 122 aa11.2□□□□□ -0.62
PPFIA3-206ENST00000602655 TRAV23DV6A0A075B6W5 121 aa11.2□□□□□ -0.62
PPFIA3-206ENST00000602655 Q5XG85 94 aa11.2□□□□□ -0.62
PPFIA3-206ENST00000602655 KLK9Q9UKQ9 250 aa11.2□□□□□ -0.62
PPFIA3-206ENST00000602655 IGHV1-58A0A0C4DH39 117 aa11.2□□□□□ -0.62
PPFIA3-206ENST00000602655 IGLV1-40P01703 118 aa11.2□□□□□ -0.62
PPFIA3-206ENST00000602655 FBN1P35555 2871 aaKnown RBP11.19□□□□□ -0.62
PPFIA3-206ENST00000602655 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
PPFIA3-206ENST00000602655 C20orf203Q8NBC4 194 aa11.19□□□□□ -0.62
PPFIA3-206ENST00000602655 WFDC9Q8NEX5 89 aa11.19□□□□□ -0.62
PPFIA3-206ENST00000602655 MUC4Q99102 2169 aa11.19□□□□□ -0.62
PPFIA3-206ENST00000602655 DEFB131AP59861 70 aa11.19□□□□□ -0.62
PPFIA3-206ENST00000602655 PRIMA1Q86XR5 153 aa11.19□□□□□ -0.62
PPFIA3-206ENST00000602655 LITAFQ99732 161 aa11.19□□□□□ -0.62
PPFIA3-206ENST00000602655 LINC01600Q96MT4 127 aa11.18□□□□□ -0.62
PPFIA3-206ENST00000602655 PRO0628Q9UI54 55 aa11.18□□□□□ -0.62
PPFIA3-206ENST00000602655 GHRHP01286 108 aa11.18□□□□□ -0.62
PPFIA3-206ENST00000602655 Q8N2B8 174 aa11.18□□□□□ -0.62
PPFIA3-206ENST00000602655 TRRAPQ9Y4A5 3859 aa11.18□□□□□ -0.62
PPFIA3-206ENST00000602655 BRK1Q8WUW1 75 aa11.17□□□□□ -0.62
PPFIA3-206ENST00000602655 A0A0J9YX75 114 aa11.17□□□□□ -0.62
PPFIA3-206ENST00000602655 MALP21145 153 aa11.17□□□□□ -0.62
PPFIA3-206ENST00000602655 C9orf139Q6ZV77 190 aa11.17□□□□□ -0.62
PPFIA3-206ENST00000602655 TRBV27A0A0K0K1C4 114 aa11.17□□□□□ -0.62
PPFIA3-206ENST00000602655 Q9H8V8 135 aa11.17□□□□□ -0.62
PPFIA3-206ENST00000602655 FAM236DA0A1B0GTK5 79 aa11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 FAM236CP0DP71 79 aa11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 FHL2Q14192 279 aa11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 UBE2E2Q96LR5 201 aa11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 AKAP9Q99996 3911 aa11.16□□□□□ -0.62
PPFIA3-206ENST00000602655 RNASE1P07998 156 aaKnown RBP11.15□□□□□ -0.62
PPFIA3-206ENST00000602655 VSIG2Q96IQ7 327 aa11.15□□□□□ -0.62
PPFIA3-206ENST00000602655 HILS1P60008 231 aa11.15□□□□□ -0.63
PPFIA3-206ENST00000602655 C19orf54Q5BKX5 351 aa11.15□□□□□ -0.63
PPFIA3-206ENST00000602655 LINC00315P59091 139 aa11.14□□□□□ -0.63
PPFIA3-206ENST00000602655 WFDC10AQ9H1F0 79 aa11.14□□□□□ -0.63
PPFIA3-206ENST00000602655 LINC00846Q9NV44 126 aa11.14□□□□□ -0.63
PPFIA3-206ENST00000602655 LINC01006Q8NI28 216 aa11.14□□□□□ -0.63
PPFIA3-206ENST00000602655 KRTAP1-1Q07627 177 aa11.13□□□□□ -0.63
PPFIA3-206ENST00000602655 LINC00308Q8TCZ7 52 aa11.13□□□□□ -0.63
PPFIA3-206ENST00000602655 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.12□□□□□ -0.63
PPFIA3-206ENST00000602655 IGKV2-29A2NJV5 120 aaPredicted RBP11.12□□□□□ -0.63
PPFIA3-206ENST00000602655 FAM218AQ96MZ4 157 aa11.12□□□□□ -0.63
PPFIA3-206ENST00000602655 SNRPD3P62318 126 aaKnown RBP11.12□□□□□ -0.63
PPFIA3-206ENST00000602655 MRPL53Q96EL3 112 aaKnown RBP11.12□□□□□ -0.63
PPFIA3-206ENST00000602655 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
PPFIA3-206ENST00000602655 KIF25-AS1Q9Y6Z4 181 aa11.12□□□□□ -0.63
PPFIA3-206ENST00000602655 CDKN2A-AS1Q9UH64 79 aa11.12□□□□□ -0.63
PPFIA3-206ENST00000602655 SEC61GP60059 68 aa11.11□□□□□ -0.63
PPFIA3-206ENST00000602655 CFHR3Q02985 330 aa11.11□□□□□ -0.63
PPFIA3-206ENST00000602655 IGHV3-38A0A0C4DH36 116 aa11.11□□□□□ -0.63
PPFIA3-206ENST00000602655 XCL2Q9UBD3 114 aa11.11□□□□□ -0.63
PPFIA3-206ENST00000602655 V9GYY9 64 aa11.11□□□□□ -0.63
PPFIA3-206ENST00000602655 M0QY20 66 aa11.1□□□□□ -0.63
PPFIA3-206ENST00000602655 CCL24O00175 119 aa11.1□□□□□ -0.63
PPFIA3-206ENST00000602655 NCR3O14931 201 aa11.1□□□□□ -0.63
PPFIA3-206ENST00000602655 PIK3CD-AS1Q5SR53 167 aa11.1□□□□□ -0.63
PPFIA3-206ENST00000602655 LINC01561Q8N1V8 128 aa11.1□□□□□ -0.63
PPFIA3-206ENST00000602655 FSHBP01225 129 aa11.1□□□□□ -0.63
PPFIA3-206ENST00000602655 SOCS3O14543 225 aa11.1□□□□□ -0.63
PPFIA3-206ENST00000602655 RBM3P98179 157 aaKnown RBP11.1□□□□□ -0.63
PPFIA3-206ENST00000602655 PF4P02776 101 aa11.09□□□□□ -0.63
PPFIA3-206ENST00000602655 SLPIP03973 132 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms