RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 TRBV10-1A0A0K0K1A3 114 aa9.68□□□□□ -0.86
NEAT1-203ENST00000601801 TSHBP01222 138 aa9.68□□□□□ -0.86
NEAT1-203ENST00000601801 DNAH10OSP0CZ25 163 aa9.68□□□□□ -0.86
NEAT1-203ENST00000601801 INAFM2P0DMQ5 153 aa9.68□□□□□ -0.86
NEAT1-203ENST00000601801 PCP2Q8IVA1 136 aa9.68□□□□□ -0.86
NEAT1-203ENST00000601801 C11orf86A6NJI1 115 aa9.67□□□□□ -0.86
NEAT1-203ENST00000601801 SPANXA1Q9NS26 97 aa9.67□□□□□ -0.86
NEAT1-203ENST00000601801 A0A087WTM6 91 aa9.66□□□□□ -0.86
NEAT1-203ENST00000601801 LOC100131303A0A0U1RQF7 123 aa9.66□□□□□ -0.86
NEAT1-203ENST00000601801 COTL1Q14019 142 aa9.66□□□□□ -0.86
NEAT1-203ENST00000601801 C10orf126Q8N4M7 172 aa9.66□□□□□ -0.86
NEAT1-203ENST00000601801 VCX2Q9H322 139 aa9.66□□□□□ -0.86
NEAT1-203ENST00000601801 TRBV25-1A0A075B6N4 114 aa9.65□□□□□ -0.86
NEAT1-203ENST00000601801 IGKV2D-26A0A0A0MRZ7 120 aa9.65□□□□□ -0.86
NEAT1-203ENST00000601801 TRAV8-6A0A0B4J262 113 aa9.65□□□□□ -0.86
NEAT1-203ENST00000601801 MYMXA0A1B0GTQ4 84 aa9.65□□□□□ -0.86
NEAT1-203ENST00000601801 H3BRM9 83 aa9.65□□□□□ -0.86
NEAT1-203ENST00000601801 FUSP35637 526 aaKnown RBP eCLIP9.65□□□□□ -0.863e-17■□□□□ 11.3
NEAT1-203ENST00000601801 CHAC1Q9BUX1 264 aa9.65□□□□□ -0.86
NEAT1-203ENST00000601801 IGHV3-38A0A0C4DH36 116 aa9.64□□□□□ -0.87
NEAT1-203ENST00000601801 TIRAPP58753 221 aa9.64□□□□□ -0.87
NEAT1-203ENST00000601801 RPL39P62891 51 aaKnown RBP9.64□□□□□ -0.87
NEAT1-203ENST00000601801 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
NEAT1-203ENST00000601801 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
NEAT1-203ENST00000601801 PRADC1Q9BSG0 188 aa9.64□□□□□ -0.87
NEAT1-203ENST00000601801 IGHV3-73A0A0B4J1V6 119 aa9.63□□□□□ -0.87
NEAT1-203ENST00000601801 TAX1BP3O14907 124 aa9.63□□□□□ -0.87
NEAT1-203ENST00000601801 DAZ4Q86SG3 579 aaKnown RBP9.63□□□□□ -0.87
NEAT1-203ENST00000601801 SLC25A29Q8N8R3 303 aa9.63□□□□□ -0.87
NEAT1-203ENST00000601801 TIMM21Q9BVV7 248 aa9.63□□□□□ -0.87
NEAT1-203ENST00000601801 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
NEAT1-203ENST00000601801 DAZ3Q9NR90 486 aaKnown RBP9.63□□□□□ -0.87
NEAT1-203ENST00000601801 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
NEAT1-203ENST00000601801 TRBV6-4A0A1B0GX49 114 aa9.62□□□□□ -0.87
NEAT1-203ENST00000601801 SMIM13P0DJ93 91 aa9.62□□□□□ -0.87
NEAT1-203ENST00000601801 PTTG1IPP53801 180 aa9.62□□□□□ -0.87
NEAT1-203ENST00000601801 UBE2V1Q13404 147 aa9.62□□□□□ -0.87
NEAT1-203ENST00000601801 VAMP3Q15836 100 aa9.62□□□□□ -0.87
NEAT1-203ENST00000601801 IGLV4-3A0A075B6K6 122 aa9.61□□□□□ -0.87
NEAT1-203ENST00000601801 TRBV7-3A0A075B6L6 115 aa9.61□□□□□ -0.87
NEAT1-203ENST00000601801 PSCAO43653 123 aa9.61□□□□□ -0.87
NEAT1-203ENST00000601801 LINC01556Q5JQF7 62 aa9.61□□□□□ -0.87
NEAT1-203ENST00000601801 TMEM170BQ5T4T1 132 aa9.61□□□□□ -0.87
NEAT1-203ENST00000601801 CEND1Q8N111 149 aa9.61□□□□□ -0.87
NEAT1-203ENST00000601801 PLEKHB2Q96CS7 222 aa9.61□□□□□ -0.87
NEAT1-203ENST00000601801 TP73-AS1Q9UF72 201 aa9.61□□□□□ -0.87
NEAT1-203ENST00000601801 TMEM238LA0A1B0GVL6 79 aa9.6□□□□□ -0.87
NEAT1-203ENST00000601801 C9orf118A6NHY6 69 aa9.6□□□□□ -0.87
NEAT1-203ENST00000601801 A6NJY4 79 aa9.6□□□□□ -0.87
NEAT1-203ENST00000601801 GCSHP23434 173 aa9.6□□□□□ -0.87
NEAT1-203ENST00000601801 MRPS36P82909 103 aaKnown RBP9.6□□□□□ -0.87
NEAT1-203ENST00000601801 AMELXQ99217 191 aa9.6□□□□□ -0.87
NEAT1-203ENST00000601801 HIST1H4GQ99525 98 aa9.6□□□□□ -0.87
NEAT1-203ENST00000601801 ZNF815PA8K554 130 aa9.59□□□□□ -0.87
NEAT1-203ENST00000601801 LGALS3P17931 250 aaKnown RBP9.59□□□□□ -0.87
NEAT1-203ENST00000601801 XGP55808 180 aa9.59□□□□□ -0.87
NEAT1-203ENST00000601801 KRTAP10-1P60331 282 aa9.59□□□□□ -0.87
NEAT1-203ENST00000601801 SCGB1D4Q6XE38 83 aa9.59□□□□□ -0.87
NEAT1-203ENST00000601801 GTF2H5Q6ZYL4 71 aa9.59□□□□□ -0.87
NEAT1-203ENST00000601801 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
NEAT1-203ENST00000601801 LEPROTO15243 131 aa9.58□□□□□ -0.88
NEAT1-203ENST00000601801 LELP1Q5T871 98 aa9.58□□□□□ -0.88
NEAT1-203ENST00000601801 Q5VSD8 79 aa9.58□□□□□ -0.88
NEAT1-203ENST00000601801 DGAT2L7PQ6IED9 249 aa9.58□□□□□ -0.88
NEAT1-203ENST00000601801 ATP6V0E2Q8NHE4 81 aa9.58□□□□□ -0.88
NEAT1-203ENST00000601801 CHCHD7Q9BUK0 85 aa9.58□□□□□ -0.88
NEAT1-203ENST00000601801 GTSF1LQ9H1H1 148 aa9.58□□□□□ -0.88
NEAT1-203ENST00000601801 H7C423 109 aa9.57□□□□□ -0.88
NEAT1-203ENST00000601801 IGHV3-30P01768 117 aa9.57□□□□□ -0.88
NEAT1-203ENST00000601801 IGHV3-33P01772 117 aa9.57□□□□□ -0.88
NEAT1-203ENST00000601801 IGHV3-30-3P0DP02 117 aa9.57□□□□□ -0.88
NEAT1-203ENST00000601801 IGHV3-30-5P0DP03 117 aa9.57□□□□□ -0.88
NEAT1-203ENST00000601801 Q6ZSN1 163 aa9.57□□□□□ -0.88
NEAT1-203ENST00000601801 Q9HAA7 133 aa9.57□□□□□ -0.88
NEAT1-203ENST00000601801 UBE2D4Q9Y2X8 147 aa9.57□□□□□ -0.88
NEAT1-203ENST00000601801 CSDC2Q9Y534 153 aaKnown RBP9.57□□□□□ -0.88
NEAT1-203ENST00000601801 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
NEAT1-203ENST00000601801 IGLV5-52A0A0A0MRZ9 124 aa9.56□□□□□ -0.88
NEAT1-203ENST00000601801 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
NEAT1-203ENST00000601801 TMEM223A0PJW6 202 aa9.56□□□□□ -0.88
NEAT1-203ENST00000601801 NTN5Q8WTR8 489 aaPredicted RBP9.56□□□□□ -0.88
NEAT1-203ENST00000601801 SPANXB1Q9NS25 103 aaPredicted RBP9.56□□□□□ -0.88
NEAT1-203ENST00000601801 LRCOL1A6NCL2 159 aa9.55□□□□□ -0.88
NEAT1-203ENST00000601801 J3QQQ9 107 aa9.55□□□□□ -0.88
NEAT1-203ENST00000601801 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.884e-33■□□□□ 8.8
NEAT1-203ENST00000601801 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
NEAT1-203ENST00000601801 ZNF22P17026 224 aaPredicted RBP9.54□□□□□ -0.88
NEAT1-203ENST00000601801 UBE2D3P61077 147 aa9.54□□□□□ -0.88
NEAT1-203ENST00000601801 UBE2D2P62837 147 aa9.54□□□□□ -0.88
NEAT1-203ENST00000601801 UBR4Q5T4S7 5183 aa9.54□□□□□ -0.88
NEAT1-203ENST00000601801 GAGE12JA6NER3 117 aa9.53□□□□□ -0.88
NEAT1-203ENST00000601801 GAGE10A6NGK3 116 aa9.53□□□□□ -0.88
NEAT1-203ENST00000601801 FABP2P12104 132 aa9.53□□□□□ -0.88
NEAT1-203ENST00000601801 FXYD2P54710 66 aa9.53□□□□□ -0.88
NEAT1-203ENST00000601801 GAGE4Q13068 117 aa9.53□□□□□ -0.88
NEAT1-203ENST00000601801 GAGE5Q13069 117 aa9.53□□□□□ -0.88
NEAT1-203ENST00000601801 GAGE13Q4V321 117 aa9.53□□□□□ -0.88
NEAT1-203ENST00000601801 Q8N814 137 aa9.53□□□□□ -0.88
NEAT1-203ENST00000601801 DEFB104AQ8WTQ1 72 aa9.53□□□□□ -0.88
NEAT1-203ENST00000601801 TMEM101Q96IK0 257 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms