RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.3□□□□□ -1.4
HIF3A-219ENST00000600879 HIST1H2BHQ93079 126 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 HIST1H2BNQ99877 126 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 HIST1H2BMQ99879 126 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 AP5S1Q9NUS5 200 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 CYSLTR1Q9Y271 337 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 LINC01546A6NGU7 62 aa6.29□□□□□ -1.4
HIF3A-219ENST00000600879 G0S2P27469 103 aa6.29□□□□□ -1.4
HIF3A-219ENST00000600879 RBX1P62877 108 aa6.29□□□□□ -1.4
HIF3A-219ENST00000600879 SMAGPQ0VAQ4 97 aa6.29□□□□□ -1.4
HIF3A-219ENST00000600879 C2orf66Q6UXQ4 117 aa6.29□□□□□ -1.4
HIF3A-219ENST00000600879 CHCHD1Q96BP2 118 aaKnown RBP6.29□□□□□ -1.4
HIF3A-219ENST00000600879 TMEM101Q96IK0 257 aa6.29□□□□□ -1.4
HIF3A-219ENST00000600879 IGLV4-60A0A075B6I1 120 aa6.28□□□□□ -1.4
HIF3A-219ENST00000600879 A0A1B0GUV1 79 aa6.28□□□□□ -1.4
HIF3A-219ENST00000600879 HSBP1O75506 76 aa6.28□□□□□ -1.4
HIF3A-219ENST00000600879 SERF1AO75920 110 aa6.28□□□□□ -1.4
HIF3A-219ENST00000600879 ZNF25P17030 456 aaPredicted RBP6.28□□□□□ -1.4
HIF3A-219ENST00000600879 CIRBPQ14011 172 aaKnown RBP6.28□□□□□ -1.4
HIF3A-219ENST00000600879 MRPL52Q86TS9 123 aaKnown RBP6.28□□□□□ -1.4
HIF3A-219ENST00000600879 UBE2D4Q9Y2X8 147 aa6.28□□□□□ -1.4
HIF3A-219ENST00000600879 IGLV10-54A0A075B6I4 117 aa6.27□□□□□ -1.41
HIF3A-219ENST00000600879 hDV102S1A0JD36 115 aa6.27□□□□□ -1.41
HIF3A-219ENST00000600879 HBDP02042 147 aa6.27□□□□□ -1.41
HIF3A-219ENST00000600879 NDUFA6P56556 154 aa6.27□□□□□ -1.41
HIF3A-219ENST00000600879 PMCHL1Q16048 86 aa6.27□□□□□ -1.41
HIF3A-219ENST00000600879 OR5A1Q8NGJ0 315 aa6.27□□□□□ -1.41
HIF3A-219ENST00000600879 C7orf33Q8WU49 177 aa6.27□□□□□ -1.41
HIF3A-219ENST00000600879 TOMM6Q96B49 74 aa6.27□□□□□ -1.41
HIF3A-219ENST00000600879 TIMM21Q9BVV7 248 aa6.27□□□□□ -1.41
HIF3A-219ENST00000600879 SPANXA1Q9NS26 97 aa6.27□□□□□ -1.41
HIF3A-219ENST00000600879 IGHV3-64A0A075B6Q5 118 aa6.26□□□□□ -1.41
HIF3A-219ENST00000600879 A0A0J9YXV3 536 aa6.26□□□□□ -1.41
HIF3A-219ENST00000600879 LINC01549A6NIU2 74 aa6.26□□□□□ -1.41
HIF3A-219ENST00000600879 LINC00310P59036 64 aa6.26□□□□□ -1.41
HIF3A-219ENST00000600879 MIAQ16674 131 aa6.26□□□□□ -1.41
HIF3A-219ENST00000600879 KRTAP26-1Q6PEX3 210 aa6.26□□□□□ -1.41
HIF3A-219ENST00000600879 LINC00269Q8N2A0 174 aa6.26□□□□□ -1.41
HIF3A-219ENST00000600879 FAM19A2Q8N3H0 131 aa6.26□□□□□ -1.41
HIF3A-219ENST00000600879 SPACA4Q8TDM5 124 aa6.26□□□□□ -1.41
HIF3A-219ENST00000600879 SCGB3A1Q96QR1 104 aa6.26□□□□□ -1.41
HIF3A-219ENST00000600879 A0A096LNJ9 63 aa6.25□□□□□ -1.41
HIF3A-219ENST00000600879 NUPR1O60356 82 aa6.25□□□□□ -1.41
HIF3A-219ENST00000600879 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
HIF3A-219ENST00000600879 PRR3P79522 188 aaKnown RBP6.25□□□□□ -1.41
HIF3A-219ENST00000600879 RNASE13Q5GAN3 156 aaKnown RBP6.25□□□□□ -1.41
HIF3A-219ENST00000600879 Q6ZUT4 128 aa6.25□□□□□ -1.41
HIF3A-219ENST00000600879 ZNF664Q8N3J9 261 aa6.25□□□□□ -1.41
HIF3A-219ENST00000600879 OPRPNQ99935 248 aaPredicted RBP6.25□□□□□ -1.41
HIF3A-219ENST00000600879 PYGO1Q9Y3Y4 419 aa6.25□□□□□ -1.41
HIF3A-219ENST00000600879 CSDC2Q9Y534 153 aaKnown RBP6.25□□□□□ -1.41
HIF3A-219ENST00000600879 MUC2Q02817 5179 aa6.24□□□□□ -1.41
HIF3A-219ENST00000600879 IGLV4-3A0A075B6K6 122 aa6.24□□□□□ -1.41
HIF3A-219ENST00000600879 IGKV3OR2-268A0A0C4DH90 116 aa6.24□□□□□ -1.41
HIF3A-219ENST00000600879 SLPIP03973 132 aa6.24□□□□□ -1.41
HIF3A-219ENST00000600879 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
HIF3A-219ENST00000600879 MRPS36P82909 103 aaKnown RBP6.24□□□□□ -1.41
HIF3A-219ENST00000600879 REG3AQ06141 175 aa6.24□□□□□ -1.41
HIF3A-219ENST00000600879 ERASQ7Z444 233 aa6.24□□□□□ -1.41
HIF3A-219ENST00000600879 TMEM141Q96I45 108 aa6.24□□□□□ -1.41
HIF3A-219ENST00000600879 TIMM17AQ99595 171 aa6.24□□□□□ -1.41
HIF3A-219ENST00000600879 CDC42SE2Q9NRR3 84 aa6.24□□□□□ -1.41
HIF3A-219ENST00000600879 PLAC8Q9NZF1 115 aa6.24□□□□□ -1.41
HIF3A-219ENST00000600879 IGKV2-24A0A0C4DH68 120 aa6.23□□□□□ -1.41
HIF3A-219ENST00000600879 IGIPA6NJ69 53 aa6.23□□□□□ -1.41
HIF3A-219ENST00000600879 S100A6P06703 90 aa6.23□□□□□ -1.41
HIF3A-219ENST00000600879 MAJINQ3KP22 176 aa6.23□□□□□ -1.41
HIF3A-219ENST00000600879 PDZD11Q5EBL8 140 aa6.23□□□□□ -1.41
HIF3A-219ENST00000600879 COA6Q5JTJ3 125 aaKnown RBP6.23□□□□□ -1.41
HIF3A-219ENST00000600879 Q6ZN92 141 aa6.23□□□□□ -1.41
HIF3A-219ENST00000600879 PRR34Q9NV39 138 aa6.23□□□□□ -1.41
HIF3A-219ENST00000600879 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.22□□□□□ -1.41
HIF3A-219ENST00000600879 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.22□□□□□ -1.41
HIF3A-219ENST00000600879 ATP5LO75964 103 aa6.22□□□□□ -1.41
HIF3A-219ENST00000600879 LEPROTL1O95214 131 aa6.22□□□□□ -1.41
HIF3A-219ENST00000600879 NPSP0C0P6 89 aa6.22□□□□□ -1.41
HIF3A-219ENST00000600879 COX6A2Q02221 97 aa6.22□□□□□ -1.41
HIF3A-219ENST00000600879 PAPPA-AS1Q5QFB9 102 aa6.22□□□□□ -1.41
HIF3A-219ENST00000600879 TEX43Q6ZNM6 134 aa6.22□□□□□ -1.41
HIF3A-219ENST00000600879 FAM104AQ969W3 186 aa6.22□□□□□ -1.41
HIF3A-219ENST00000600879 VCX2Q9H322 139 aa6.22□□□□□ -1.41
HIF3A-219ENST00000600879 FAT4Q6V0I7 4981 aa6.22□□□□□ -1.41
HIF3A-219ENST00000600879 TRAV13-1A0A0B4J241 112 aa6.21□□□□□ -1.42
HIF3A-219ENST00000600879 IFITM10A6NMD0 228 aa6.21□□□□□ -1.42
HIF3A-219ENST00000600879 FABP4P15090 132 aa6.21□□□□□ -1.42
HIF3A-219ENST00000600879 SS18Q15532 418 aa6.21□□□□□ -1.42
HIF3A-219ENST00000600879 ZC2HC1BQ5TFG8 222 aa6.21□□□□□ -1.42
HIF3A-219ENST00000600879 REG3GQ6UW15 175 aa6.21□□□□□ -1.42
HIF3A-219ENST00000600879 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
HIF3A-219ENST00000600879 TRAV8-4A0A0B4J246 113 aa6.2□□□□□ -1.42
HIF3A-219ENST00000600879 LINC00959A0A1B0GUT2 108 aa6.2□□□□□ -1.42
HIF3A-219ENST00000600879 LINC00173Q6ZV60 143 aa6.2□□□□□ -1.42
HIF3A-219ENST00000600879 STPG4Q8N801 248 aa6.2□□□□□ -1.42
HIF3A-219ENST00000600879 IFI27L1Q96BM0 104 aa6.2□□□□□ -1.42
HIF3A-219ENST00000600879 AMELXQ99217 191 aa6.2□□□□□ -1.42
HIF3A-219ENST00000600879 HSPB8Q9UJY1 196 aa6.2□□□□□ -1.42
HIF3A-219ENST00000600879 TMA7Q9Y2S6 64 aaKnown RBP6.2□□□□□ -1.42
HIF3A-219ENST00000600879 CCL25O15444 150 aa6.19□□□□□ -1.42
HIF3A-219ENST00000600879 PMVKQ15126 192 aa6.19□□□□□ -1.42
HIF3A-219ENST00000600879 SPINK6Q6UWN8 80 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms