RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 RPL18AQ02543 176 aaKnown RBP3.63□□□□□ -1.83
VRK3-220ENST00000600259 PRR4Q16378 134 aa3.63□□□□□ -1.83
VRK3-220ENST00000600259 RNASE13Q5GAN3 156 aaKnown RBP3.63□□□□□ -1.83
VRK3-220ENST00000600259 ALKAL2Q6UX46 152 aa3.63□□□□□ -1.83
VRK3-220ENST00000600259 FAM231DQ6ZW35 169 aa3.63□□□□□ -1.83
VRK3-220ENST00000600259 SMIM15Q7Z3B0 74 aa3.63□□□□□ -1.83
VRK3-220ENST00000600259 SVBPQ8N300 66 aa3.63□□□□□ -1.83
VRK3-220ENST00000600259 TMEM191AQ9H0A3 160 aa3.63□□□□□ -1.83
VRK3-220ENST00000600259 TRAV13-1A0A0B4J241 112 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 TMEM218A2RU14 115 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 A8MWL6 223 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 F8WDY8 70 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 VCYO14598 125 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 GATCO43716 136 aaKnown RBP3.62□□□□□ -1.83
VRK3-220ENST00000600259 SNAPINO95295 136 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 APOC3P02656 99 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 S100A8P05109 93 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 MALP21145 153 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 SPAG11BQ08648 103 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 KIAA0087Q14695 138 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 UNQ6190/PRO20217Q6UXQ8 127 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 Q6ZUT4 128 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 NRACQ8N912 160 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 TIMM21Q9BVV7 248 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 SEC11CQ9BY50 192 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 C6orf48Q9UBA6 75 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
VRK3-220ENST00000600259 SMKR1H3BMG3 65 aa3.61□□□□□ -1.83
VRK3-220ENST00000600259 SMIM6P0DI80 62 aa3.61□□□□□ -1.83
VRK3-220ENST00000600259 TMEM241Q24JQ0 296 aa3.61□□□□□ -1.83
VRK3-220ENST00000600259 FAM74A3Q4VXF1 159 aa3.61□□□□□ -1.83
VRK3-220ENST00000600259 CT83Q5H943 113 aa3.61□□□□□ -1.83
VRK3-220ENST00000600259 AMN1Q8IY45 258 aa3.61□□□□□ -1.83
VRK3-220ENST00000600259 OR10D4PQ8NGN7 298 aa3.61□□□□□ -1.83
VRK3-220ENST00000600259 IMMP2LQ96T52 175 aa3.61□□□□□ -1.83
VRK3-220ENST00000600259 C12orf57Q99622 126 aa3.61□□□□□ -1.83
VRK3-220ENST00000600259 A0A0U1RQV1 116 aa3.6□□□□□ -1.83
VRK3-220ENST00000600259 A0A1B0GUT8 65 aa3.6□□□□□ -1.83
VRK3-220ENST00000600259 TAGLN2P37802 199 aaKnown RBP3.6□□□□□ -1.83
VRK3-220ENST00000600259 RPL13AP40429 203 aaKnown RBP3.6□□□□□ -1.83
VRK3-220ENST00000600259 SUMO2P61956 95 aaKnown RBP3.6□□□□□ -1.83
VRK3-220ENST00000600259 C9orf129Q5T035 196 aaKnown RBP3.6□□□□□ -1.83
VRK3-220ENST00000600259 FAM19A5Q7Z5A7 132 aaPredicted RBP3.6□□□□□ -1.83
VRK3-220ENST00000600259 LINC00469Q8N7U9 141 aa3.6□□□□□ -1.83
VRK3-220ENST00000600259 TSKUQ8WUA8 353 aa3.6□□□□□ -1.83
VRK3-220ENST00000600259 ORAOV1Q8WV07 137 aa3.6□□□□□ -1.83
VRK3-220ENST00000600259 SMDT1Q9H4I9 107 aa3.6□□□□□ -1.83
VRK3-220ENST00000600259 TRBV24-1A0A075B6N3 115 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 HIGD1CA8MV81 97 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 TMEM250H0YL14 139 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 NDUFA1O15239 70 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 ZNF861PO60384 105 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 TSPAN13O95857 204 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 ADCYAP1P18509 176 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 RAB5BP61020 215 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 RPL39P62891 51 aaKnown RBP3.59□□□□□ -1.83
VRK3-220ENST00000600259 RPL32P62910 135 aaKnown RBP3.59□□□□□ -1.83
VRK3-220ENST00000600259 GAGE2EQ4V326 116 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 ANAPC16Q96DE5 110 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 GAGE2DQ9UEU5 116 aa3.59□□□□□ -1.83
VRK3-220ENST00000600259 A0A087X002 238 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 C5orf52A6NGY3 159 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 M0QXV9 152 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 S100A6P06703 90 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 S100PP25815 95 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 FCER1GP30273 86 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 UBE2D1P51668 147 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 BLOC1S1P78537 153 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 MRPS36P82909 103 aaKnown RBP3.58□□□□□ -1.84
VRK3-220ENST00000600259 SMAGPQ0VAQ4 97 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 MRPL51Q4U2R6 128 aaKnown RBP3.58□□□□□ -1.84
VRK3-220ENST00000600259 FAM104BQ5XKR9 115 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 LINC01551Q86U37 167 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 OSTCQ9NRP0 149 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 SMCO4Q9NRQ5 59 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 V9GYV3 84 aa3.58□□□□□ -1.84
VRK3-220ENST00000600259 PCP4L1A6NKN8 68 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 COLCA2A8K830 154 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 PPP1R17O96001 155 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 MT-ND4LP03901 98 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 AKR1D1P51857 326 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 PEA15Q15121 130 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 ANKRD39Q53RE8 183 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 LINC00242Q5T6M2 205 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 C2orf82Q6UX34 121 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 KIR2DL4Q99706 377 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 C20orf78Q9BR46 151 aa3.57□□□□□ -1.84
VRK3-220ENST00000600259 TRBV30A0A0K0K1B3 111 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 NDUFC2-KCTD14E9PQ53 114 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 PPP1R2P9O14990 202 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 UBE2BP63146 152 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 RIGQ13278 110 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 KRTAP13-2Q52LG2 175 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 CBLN2Q8IUK8 224 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 TMEM18Q96B42 140 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 BORCS7Q96B45 105 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 SPANXA1Q9NS26 97 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 C22orf24Q9Y442 160 aa3.56□□□□□ -1.84
VRK3-220ENST00000600259 ZNF727A8MUV8 499 aa3.55□□□□□ -1.84
VRK3-220ENST00000600259 TNFRSF6BO95407 300 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms