RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 PKHD1P08F94 4074 aa9.44□□□□□ -0.9
VRK3-213ENST00000597215 COX7A2LO14548 114 aa9.43□□□□□ -0.9
VRK3-213ENST00000597215 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.42□□□□□ -0.9
VRK3-213ENST00000597215 LINC00310P59036 64 aa9.42□□□□□ -0.9
VRK3-213ENST00000597215 LINC00242Q5T6M2 205 aa9.42□□□□□ -0.9
VRK3-213ENST00000597215 IGLV5-52A0A0A0MRZ9 124 aa9.41□□□□□ -0.9
VRK3-213ENST00000597215 IGHV3OR16-9A0A0B4J2B5 98 aa9.41□□□□□ -0.9
VRK3-213ENST00000597215 IGHV1-58A0A0C4DH39 117 aa9.41□□□□□ -0.9
VRK3-213ENST00000597215 C16orf90A8MZG2 172 aa9.41□□□□□ -0.9
VRK3-213ENST00000597215 MALP21145 153 aa9.41□□□□□ -0.9
VRK3-213ENST00000597215 SEC11AP67812 179 aa9.41□□□□□ -0.9
VRK3-213ENST00000597215 PMVKQ15126 192 aa9.41□□□□□ -0.9
VRK3-213ENST00000597215 FAM19A2Q8N3H0 131 aa9.41□□□□□ -0.9
VRK3-213ENST00000597215 C15orf56Q8N910 161 aa9.41□□□□□ -0.9
VRK3-213ENST00000597215 hDV102S1A0JD36 115 aa9.4□□□□□ -0.9
VRK3-213ENST00000597215 PRSS1P07477 247 aa9.4□□□□□ -0.9
VRK3-213ENST00000597215 FUSP35637 526 aaKnown RBP eCLIP9.4□□□□□ -0.9
VRK3-213ENST00000597215 FAM19A3Q7Z5A8 133 aa9.4□□□□□ -0.9
VRK3-213ENST00000597215 C5orf38Q86SI9 138 aa9.4□□□□□ -0.9
VRK3-213ENST00000597215 CST9LQ9H4G1 147 aa9.4□□□□□ -0.9
VRK3-213ENST00000597215 NUPR1O60356 82 aa9.39□□□□□ -0.91
VRK3-213ENST00000597215 APOMO95445 188 aa9.39□□□□□ -0.91
VRK3-213ENST00000597215 IFI27L1Q96BM0 104 aa9.39□□□□□ -0.91
VRK3-213ENST00000597215 GVQW2A0A096LPI5 108 aaPredicted RBP9.38□□□□□ -0.91
VRK3-213ENST00000597215 NDUFA6P56556 154 aa9.38□□□□□ -0.91
VRK3-213ENST00000597215 HERVK_113P63121 156 aa9.38□□□□□ -0.91
VRK3-213ENST00000597215 COX6A2Q02221 97 aa9.38□□□□□ -0.91
VRK3-213ENST00000597215 HIGD2BQ4VC39 106 aa9.38□□□□□ -0.91
VRK3-213ENST00000597215 GEMIN7Q9H840 131 aaKnown RBP9.38□□□□□ -0.91
VRK3-213ENST00000597215 A0A087WZ39 114 aa9.37□□□□□ -0.91
VRK3-213ENST00000597215 A0A0J9YXV3 536 aa9.37□□□□□ -0.91
VRK3-213ENST00000597215 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
VRK3-213ENST00000597215 LEPROTL1O95214 131 aa9.37□□□□□ -0.91
VRK3-213ENST00000597215 DYNC1H1Q14204 4646 aaKnown RBP9.36□□□□□ -0.91
VRK3-213ENST00000597215 GCSHP23434 173 aa9.36□□□□□ -0.91
VRK3-213ENST00000597215 COA6Q5JTJ3 125 aaKnown RBP9.36□□□□□ -0.91
VRK3-213ENST00000597215 LINC01561Q8N1V8 128 aa9.36□□□□□ -0.91
VRK3-213ENST00000597215 HSPB8Q9UJY1 196 aa9.36□□□□□ -0.91
VRK3-213ENST00000597215 DNAH5Q8TE73 4624 aa9.36□□□□□ -0.91
VRK3-213ENST00000597215 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.35□□□□□ -0.91
VRK3-213ENST00000597215 ZNF561-AS1K7EIQ3 104 aa9.35□□□□□ -0.91
VRK3-213ENST00000597215 CNBPP62633 177 aaKnown RBP9.35□□□□□ -0.91
VRK3-213ENST00000597215 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
VRK3-213ENST00000597215 IGHV3-64A0A075B6Q5 118 aa9.34□□□□□ -0.91
VRK3-213ENST00000597215 TRAV12-1A0A0B4J245 112 aa9.34□□□□□ -0.91
VRK3-213ENST00000597215 IGLC3P0DOY3 106 aa9.34□□□□□ -0.91
VRK3-213ENST00000597215 FABP4P15090 132 aa9.34□□□□□ -0.91
VRK3-213ENST00000597215 SPAG11BQ08648 103 aa9.34□□□□□ -0.91
VRK3-213ENST00000597215 LINC00469Q8N7U9 141 aa9.34□□□□□ -0.91
VRK3-213ENST00000597215 ORAOV1Q8WV07 137 aa9.34□□□□□ -0.91
VRK3-213ENST00000597215 CDKN2A-AS1Q9UH64 79 aa9.34□□□□□ -0.91
VRK3-213ENST00000597215 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
VRK3-213ENST00000597215 PACRGQ96M98 296 aaPredicted RBP9.33□□□□□ -0.92
VRK3-213ENST00000597215 CHAC1Q9BUX1 264 aa9.33□□□□□ -0.92
VRK3-213ENST00000597215 IGLV4-69A0A075B6H9 119 aa9.32□□□□□ -0.92
VRK3-213ENST00000597215 SLPIP03973 132 aa9.32□□□□□ -0.92
VRK3-213ENST00000597215 LINC00526Q96FQ7 95 aa9.32□□□□□ -0.92
VRK3-213ENST00000597215 CHTOPQ9Y3Y2 248 aaKnown RBP9.32□□□□□ -0.92
VRK3-213ENST00000597215 H3BRM9 83 aa9.31□□□□□ -0.92
VRK3-213ENST00000597215 KRTAP10-1P60331 282 aa9.31□□□□□ -0.92
VRK3-213ENST00000597215 C9orf163Q8N9P6 203 aa9.31□□□□□ -0.92
VRK3-213ENST00000597215 C2orf48Q96LS8 159 aa9.31□□□□□ -0.92
VRK3-213ENST00000597215 LRP1BQ9NZR2 4599 aa9.31□□□□□ -0.92
VRK3-213ENST00000597215 H0Y8G0 127 aa9.3□□□□□ -0.92
VRK3-213ENST00000597215 LINC01620Q4KN68 170 aa9.3□□□□□ -0.92
VRK3-213ENST00000597215 CARD19Q96LW7 228 aa9.3□□□□□ -0.92
VRK3-213ENST00000597215 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
VRK3-213ENST00000597215 C11orf86A6NJI1 115 aa9.29□□□□□ -0.92
VRK3-213ENST00000597215 SMIM1B2RUZ4 78 aa9.29□□□□□ -0.92
VRK3-213ENST00000597215 F8VRH5 84 aa9.29□□□□□ -0.92
VRK3-213ENST00000597215 F8WDY8 70 aa9.29□□□□□ -0.92
VRK3-213ENST00000597215 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
VRK3-213ENST00000597215 SYCNQ0VAF6 134 aa9.29□□□□□ -0.92
VRK3-213ENST00000597215 MAP1LC3CQ9BXW4 147 aa9.29□□□□□ -0.92
VRK3-213ENST00000597215 MRPL35Q9NZE8 188 aaKnown RBP9.29□□□□□ -0.92
VRK3-213ENST00000597215 PRSS2P07478 247 aa9.28□□□□□ -0.92
VRK3-213ENST00000597215 ODF1Q14990 250 aa9.28□□□□□ -0.92
VRK3-213ENST00000597215 TOMM7Q9P0U1 55 aa9.28□□□□□ -0.92
VRK3-213ENST00000597215 NDUFA1O15239 70 aa9.27□□□□□ -0.93
VRK3-213ENST00000597215 S100A6P06703 90 aa9.27□□□□□ -0.93
VRK3-213ENST00000597215 SPINK8P0C7L1 97 aa9.27□□□□□ -0.93
VRK3-213ENST00000597215 KIAA0087Q14695 138 aa9.27□□□□□ -0.93
VRK3-213ENST00000597215 TMEM170BQ5T4T1 132 aa9.27□□□□□ -0.93
VRK3-213ENST00000597215 Q6ZRU5 148 aa9.27□□□□□ -0.93
VRK3-213ENST00000597215 Q8IZM0 81 aa9.27□□□□□ -0.93
VRK3-213ENST00000597215 PKIGQ9Y2B9 76 aa9.26□□□□□ -0.93
VRK3-213ENST00000597215 HERC2O95714 4834 aa9.26□□□□□ -0.93
VRK3-213ENST00000597215 C6orf226Q5I0X4 101 aa9.25□□□□□ -0.93
VRK3-213ENST00000597215 SDIM1Q6ZPB5 146 aa9.25□□□□□ -0.93
VRK3-213ENST00000597215 SYS1-DBNDD2H3BUS1 97 aa9.24□□□□□ -0.93
VRK3-213ENST00000597215 CDK2AP2O75956 126 aa9.24□□□□□ -0.93
VRK3-213ENST00000597215 PLNP26678 52 aa9.24□□□□□ -0.93
VRK3-213ENST00000597215 CKS1BP61024 79 aa9.24□□□□□ -0.93
VRK3-213ENST00000597215 RNF151Q2KHN1 245 aa9.24□□□□□ -0.93
VRK3-213ENST00000597215 Q6ZSA8 131 aa9.24□□□□□ -0.93
VRK3-213ENST00000597215 COX7B2Q8TF08 81 aa9.24□□□□□ -0.93
VRK3-213ENST00000597215 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
VRK3-213ENST00000597215 DPM2O94777 84 aa9.23□□□□□ -0.93
VRK3-213ENST00000597215 CXCL5P42830 114 aa9.23□□□□□ -0.93
VRK3-213ENST00000597215 UNQ6190/PRO20217Q6UXQ8 127 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms