RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 C2orf88Q9BSF0 95 aa7.18□□□□□ -1.26
LIG1-211ENST00000596457 LRP1BQ9NZR2 4599 aa7.17□□□□□ -1.26
LIG1-211ENST00000596457 IGHV3-64A0A075B6Q5 118 aa7.16□□□□□ -1.26
LIG1-211ENST00000596457 GVQW2A0A096LPI5 108 aaPredicted RBP7.16□□□□□ -1.26
LIG1-211ENST00000596457 IGIPA6NJ69 53 aa7.16□□□□□ -1.26
LIG1-211ENST00000596457 APOMO95445 188 aa7.16□□□□□ -1.26
LIG1-211ENST00000596457 CNBPP62633 177 aaKnown RBP7.16□□□□□ -1.26
LIG1-211ENST00000596457 DPH3Q96FX2 82 aa7.16□□□□□ -1.26
LIG1-211ENST00000596457 LINC01546A6NGU7 62 aa7.15□□□□□ -1.26
LIG1-211ENST00000596457 EPM2AB3EWF7 344 aa7.15□□□□□ -1.26
LIG1-211ENST00000596457 LINC00614P0C842 121 aa7.15□□□□□ -1.26
LIG1-211ENST00000596457 COX6A2Q02221 97 aa7.15□□□□□ -1.26
LIG1-211ENST00000596457 PMCHL1Q16048 86 aa7.15□□□□□ -1.26
LIG1-211ENST00000596457 PAPPA-AS1Q5QFB9 102 aa7.15□□□□□ -1.26
LIG1-211ENST00000596457 LINC00173Q6ZV60 143 aa7.15□□□□□ -1.26
LIG1-211ENST00000596457 ERASQ7Z444 233 aa7.15□□□□□ -1.26
LIG1-211ENST00000596457 AMELXQ99217 191 aa7.15□□□□□ -1.26
LIG1-211ENST00000596457 TIMM17AQ99595 171 aa7.15□□□□□ -1.26
LIG1-211ENST00000596457 IGLV4-69A0A075B6H9 119 aa7.14□□□□□ -1.27
LIG1-211ENST00000596457 SCO1O75880 301 aa7.14□□□□□ -1.27
LIG1-211ENST00000596457 TRGC2P03986 189 aa7.14□□□□□ -1.27
LIG1-211ENST00000596457 UBE2D1P51668 147 aa7.14□□□□□ -1.27
LIG1-211ENST00000596457 RAB5BP61020 215 aa7.14□□□□□ -1.27
LIG1-211ENST00000596457 LINC00242Q5T6M2 205 aa7.14□□□□□ -1.27
LIG1-211ENST00000596457 ORAOV1Q8WV07 137 aa7.14□□□□□ -1.27
LIG1-211ENST00000596457 URB1-AS1Q96HZ7 61 aa7.14□□□□□ -1.27
LIG1-211ENST00000596457 IGHV3OR16-9A0A0B4J2B5 98 aa7.13□□□□□ -1.27
LIG1-211ENST00000596457 NPSP0C0P6 89 aa7.13□□□□□ -1.27
LIG1-211ENST00000596457 NDUFA6P56556 154 aa7.13□□□□□ -1.27
LIG1-211ENST00000596457 SPAG11BQ08648 103 aa7.13□□□□□ -1.27
LIG1-211ENST00000596457 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
LIG1-211ENST00000596457 SDIM1Q6ZPB5 146 aa7.13□□□□□ -1.27
LIG1-211ENST00000596457 Q6ZSA8 131 aa7.13□□□□□ -1.27
LIG1-211ENST00000596457 SCXQ7RTU7 201 aa7.13□□□□□ -1.27
LIG1-211ENST00000596457 CARD19Q96LW7 228 aa7.13□□□□□ -1.27
LIG1-211ENST00000596457 CAMK2N2Q96S95 79 aa7.13□□□□□ -1.27
LIG1-211ENST00000596457 SRRM2Q9UQ35 2752 aaKnown RBP7.12□□□□□ -1.27
LIG1-211ENST00000596457 A0A0J9YXV3 536 aa7.12□□□□□ -1.27
LIG1-211ENST00000596457 LINC01549A6NIU2 74 aa7.12□□□□□ -1.27
LIG1-211ENST00000596457 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
LIG1-211ENST00000596457 IGKV2-24A0A0C4DH68 120 aa7.11□□□□□ -1.27
LIG1-211ENST00000596457 COLCA2A8K830 154 aa7.11□□□□□ -1.27
LIG1-211ENST00000596457 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.11□□□□□ -1.27
LIG1-211ENST00000596457 PANO1I0J062 215 aa7.11□□□□□ -1.27
LIG1-211ENST00000596457 HBDP02042 147 aa7.11□□□□□ -1.27
LIG1-211ENST00000596457 CHTF8P0CG12 524 aa7.11□□□□□ -1.27
LIG1-211ENST00000596457 Q6ZRU5 148 aa7.11□□□□□ -1.27
LIG1-211ENST00000596457 BAGE3Q86Y29 109 aa7.11□□□□□ -1.27
LIG1-211ENST00000596457 OR10D4PQ8NGN7 298 aa7.11□□□□□ -1.27
LIG1-211ENST00000596457 CIRBP-AS1Q8TBR5 109 aa7.11□□□□□ -1.27
LIG1-211ENST00000596457 CHAC1Q9BUX1 264 aa7.11□□□□□ -1.27
LIG1-211ENST00000596457 GEMIN7Q9H840 131 aaKnown RBP7.11□□□□□ -1.27
LIG1-211ENST00000596457 A0A087WZ39 114 aa7.1□□□□□ -1.27
LIG1-211ENST00000596457 A0A096LNJ9 63 aa7.1□□□□□ -1.27
LIG1-211ENST00000596457 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
LIG1-211ENST00000596457 MAJINQ3KP22 176 aa7.1□□□□□ -1.27
LIG1-211ENST00000596457 Q5VSD8 79 aa7.1□□□□□ -1.27
LIG1-211ENST00000596457 TOMM7Q9P0U1 55 aa7.1□□□□□ -1.27
LIG1-211ENST00000596457 APOBP04114 4563 aaKnown RBP7.09□□□□□ -1.27
LIG1-211ENST00000596457 HERVK_113P63121 156 aa7.09□□□□□ -1.27
LIG1-211ENST00000596457 SEC11AP67812 179 aa7.09□□□□□ -1.27
LIG1-211ENST00000596457 PMVKQ15126 192 aa7.09□□□□□ -1.27
LIG1-211ENST00000596457 C2orf48Q96LS8 159 aa7.09□□□□□ -1.27
LIG1-211ENST00000596457 CST9LQ9H4G1 147 aa7.09□□□□□ -1.27
LIG1-211ENST00000596457 CDKN2A-AS1Q9UH64 79 aa7.09□□□□□ -1.27
LIG1-211ENST00000596457 A0A096LNI7 61 aa7.08□□□□□ -1.28
LIG1-211ENST00000596457 NDUFA1O15239 70 aa7.08□□□□□ -1.28
LIG1-211ENST00000596457 INAFM2P0DMQ5 153 aa7.08□□□□□ -1.28
LIG1-211ENST00000596457 GAGE2BQ13066 116 aa7.08□□□□□ -1.28
LIG1-211ENST00000596457 PDZD11Q5EBL8 140 aa7.08□□□□□ -1.28
LIG1-211ENST00000596457 FAM19A3Q7Z5A8 133 aa7.08□□□□□ -1.28
LIG1-211ENST00000596457 LINC00528Q8N1L1 170 aa7.08□□□□□ -1.28
LIG1-211ENST00000596457 LINC00469Q8N7U9 141 aa7.08□□□□□ -1.28
LIG1-211ENST00000596457 CHCHD1Q96BP2 118 aaKnown RBP7.08□□□□□ -1.28
LIG1-211ENST00000596457 PACRGQ96M98 296 aaPredicted RBP7.08□□□□□ -1.28
LIG1-211ENST00000596457 DNAH8Q96JB1 4490 aa7.07□□□□□ -1.28
LIG1-211ENST00000596457 LOC107984640A0A0U1RRK4 108 aa7.07□□□□□ -1.28
LIG1-211ENST00000596457 TINCRA0A1B0GVN0 87 aa7.07□□□□□ -1.28
LIG1-211ENST00000596457 HSBP1O75506 76 aa7.07□□□□□ -1.28
LIG1-211ENST00000596457 ATP5LO75964 103 aa7.07□□□□□ -1.28
LIG1-211ENST00000596457 PRSS2P07478 247 aa7.07□□□□□ -1.28
LIG1-211ENST00000596457 RPL18AQ02543 176 aaKnown RBP7.07□□□□□ -1.28
LIG1-211ENST00000596457 UNQ6190/PRO20217Q6UXQ8 127 aa7.07□□□□□ -1.28
LIG1-211ENST00000596457 FAM19A2Q8N3H0 131 aa7.07□□□□□ -1.28
LIG1-211ENST00000596457 A0A087WYN8 130 aa7.06□□□□□ -1.28
LIG1-211ENST00000596457 C6orf226Q5I0X4 101 aa7.06□□□□□ -1.28
LIG1-211ENST00000596457 C10orf25Q5T742 122 aa7.06□□□□□ -1.28
LIG1-211ENST00000596457 C2orf82Q6UX34 121 aa7.06□□□□□ -1.28
LIG1-211ENST00000596457 LINC01561Q8N1V8 128 aa7.06□□□□□ -1.28
LIG1-211ENST00000596457 SPACA4Q8TDM5 124 aa7.06□□□□□ -1.28
LIG1-211ENST00000596457 PKIGQ9Y2B9 76 aa7.06□□□□□ -1.28
LIG1-211ENST00000596457 SPINK8P0C7L1 97 aa7.05□□□□□ -1.28
LIG1-211ENST00000596457 KIAA0087Q14695 138 aa7.05□□□□□ -1.28
LIG1-211ENST00000596457 STPG4Q8N801 248 aa7.05□□□□□ -1.28
LIG1-211ENST00000596457 F8WDY8 70 aa7.04□□□□□ -1.28
LIG1-211ENST00000596457 H0Y8G0 127 aa7.04□□□□□ -1.28
LIG1-211ENST00000596457 SERF1AO75920 110 aa7.04□□□□□ -1.28
LIG1-211ENST00000596457 CKS1BP61024 79 aa7.04□□□□□ -1.28
LIG1-211ENST00000596457 CIRBPQ14011 172 aaKnown RBP7.04□□□□□ -1.28
LIG1-211ENST00000596457 IFI27L1Q96BM0 104 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms