RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 NSD1Q96L73 2696 aaPredicted RBP10.94□□□□□ -0.66
ZNF541-205ENST00000595558 CCL24O00175 119 aa10.94□□□□□ -0.66
ZNF541-205ENST00000595558 TIRAPP58753 221 aa10.94□□□□□ -0.66
ZNF541-205ENST00000595558 PIK3CD-AS1Q5SR53 167 aa10.94□□□□□ -0.66
ZNF541-205ENST00000595558 DNAJC30Q96LL9 226 aa10.94□□□□□ -0.66
ZNF541-205ENST00000595558 IGLV5-39A0A0G2JS06 123 aa10.93□□□□□ -0.66
ZNF541-205ENST00000595558 NDUFV3P56181 108 aaKnown RBP10.93□□□□□ -0.66
ZNF541-205ENST00000595558 Q6ZTI0 123 aa10.93□□□□□ -0.66
ZNF541-205ENST00000595558 LINC01006Q8NI28 216 aa10.93□□□□□ -0.66
ZNF541-205ENST00000595558 SMIM1B2RUZ4 78 aa10.92□□□□□ -0.66
ZNF541-205ENST00000595558 TIMM17BO60830 172 aa10.92□□□□□ -0.66
ZNF541-205ENST00000595558 SS18L2Q9UHA2 77 aa10.92□□□□□ -0.66
ZNF541-205ENST00000595558 H3BT86 120 aa10.92□□□□□ -0.66
ZNF541-205ENST00000595558 B5MCH6 92 aa10.91□□□□□ -0.66
ZNF541-205ENST00000595558 IFITM1P13164 125 aa10.91□□□□□ -0.66
ZNF541-205ENST00000595558 GAGE12JA6NER3 117 aa10.9□□□□□ -0.66
ZNF541-205ENST00000595558 CCDC179H3BU77 68 aa10.9□□□□□ -0.66
ZNF541-205ENST00000595558 RPL35AP18077 110 aaKnown RBP10.9□□□□□ -0.66
ZNF541-205ENST00000595558 GAGE4Q13068 117 aa10.9□□□□□ -0.66
ZNF541-205ENST00000595558 GAGE5Q13069 117 aa10.9□□□□□ -0.66
ZNF541-205ENST00000595558 HERVK_113P63121 156 aa10.9□□□□□ -0.66
ZNF541-205ENST00000595558 CIRBPQ14011 172 aaKnown RBP10.89□□□□□ -0.67
ZNF541-205ENST00000595558 TEP1Q99973 2627 aaKnown RBP10.89□□□□□ -0.67
ZNF541-205ENST00000595558 PRIMA1Q86XR5 153 aa10.89□□□□□ -0.67
ZNF541-205ENST00000595558 STHQ8IWL8 128 aa10.88□□□□□ -0.67
ZNF541-205ENST00000595558 MEIG1Q5JSS6 88 aa10.88□□□□□ -0.67
ZNF541-205ENST00000595558 LOC100131303A0A0U1RQF7 123 aa10.88□□□□□ -0.67
ZNF541-205ENST00000595558 F5H768 121 aa10.88□□□□□ -0.67
ZNF541-205ENST00000595558 GAGE6Q13070 117 aa10.88□□□□□ -0.67
ZNF541-205ENST00000595558 SPATA3Q8NHX4 192 aa10.88□□□□□ -0.67
ZNF541-205ENST00000595558 IL17DQ8TAD2 202 aa10.88□□□□□ -0.67
ZNF541-205ENST00000595558 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
ZNF541-205ENST00000595558 K7EQD1 137 aa10.87□□□□□ -0.67
ZNF541-205ENST00000595558 NOP10Q9NPE3 64 aaKnown RBP10.87□□□□□ -0.67
ZNF541-205ENST00000595558 RPL36AP83881 106 aaKnown RBP10.86□□□□□ -0.67
ZNF541-205ENST00000595558 RPL36ALQ969Q0 106 aaKnown RBP10.86□□□□□ -0.67
ZNF541-205ENST00000595558 FAM218AQ96MZ4 157 aa10.86□□□□□ -0.67
ZNF541-205ENST00000595558 DEFB121Q5J5C9 76 aa10.86□□□□□ -0.67
ZNF541-205ENST00000595558 COX7A2LO14548 114 aa10.85□□□□□ -0.67
ZNF541-205ENST00000595558 IGKV3OR2-268A0A0C4DH90 116 aa10.85□□□□□ -0.67
ZNF541-205ENST00000595558 GIG44P09565 113 aaPredicted RBP10.85□□□□□ -0.67
ZNF541-205ENST00000595558 SHISA2Q6UWI4 295 aa10.85□□□□□ -0.67
ZNF541-205ENST00000595558 KRTAP10-3P60369 221 aa10.83□□□□□ -0.68
ZNF541-205ENST00000595558 Q6Q795 121 aa10.83□□□□□ -0.68
ZNF541-205ENST00000595558 J3QKU1 62 aa10.83□□□□□ -0.68
ZNF541-205ENST00000595558 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
ZNF541-205ENST00000595558 C22orf24Q9Y442 160 aa10.83□□□□□ -0.68
ZNF541-205ENST00000595558 DAZ2Q13117 558 aaKnown RBP10.82□□□□□ -0.68
ZNF541-205ENST00000595558 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
ZNF541-205ENST00000595558 SMCR5Q8TEV8 140 aa10.82□□□□□ -0.68
ZNF541-205ENST00000595558 CHCHD5Q9BSY4 110 aa10.82□□□□□ -0.68
ZNF541-205ENST00000595558 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
ZNF541-205ENST00000595558 CSDC2Q9Y534 153 aaKnown RBP10.82□□□□□ -0.68
ZNF541-205ENST00000595558 GAGE7O76087 117 aa10.81□□□□□ -0.68
ZNF541-205ENST00000595558 GAGE12FP0CL80 117 aa10.81□□□□□ -0.68
ZNF541-205ENST00000595558 GAGE12GP0CL81 117 aa10.81□□□□□ -0.68
ZNF541-205ENST00000595558 GAGE12IP0CL82 117 aa10.81□□□□□ -0.68
ZNF541-205ENST00000595558 PKD1L1Q8TDX9 2849 aa10.81□□□□□ -0.68
ZNF541-205ENST00000595558 Q9HAA7 133 aa10.81□□□□□ -0.68
ZNF541-205ENST00000595558 FAM240AA0A1B0GVK7 77 aa10.8□□□□□ -0.68
ZNF541-205ENST00000595558 TMEM86BQ8N661 226 aa10.8□□□□□ -0.68
ZNF541-205ENST00000595558 TOMM7Q9P0U1 55 aa10.8□□□□□ -0.68
ZNF541-205ENST00000595558 TRBV10-1A0A0K0K1A3 114 aa10.8□□□□□ -0.68
ZNF541-205ENST00000595558 PLAC8L1A1L4L8 177 aa10.79□□□□□ -0.68
ZNF541-205ENST00000595558 UBE2L6O14933 153 aa10.79□□□□□ -0.68
ZNF541-205ENST00000595558 BAALC-AS2P0C853 105 aa10.79□□□□□ -0.68
ZNF541-205ENST00000595558 LINC00337Q8N6G1 96 aa10.79□□□□□ -0.68
ZNF541-205ENST00000595558 MIR7-3HGQ8N6C7 128 aa10.78□□□□□ -0.68
ZNF541-205ENST00000595558 TMEM243Q9BU79 118 aa10.78□□□□□ -0.68
ZNF541-205ENST00000595558 IGLV4-60A0A075B6I1 120 aa10.78□□□□□ -0.68
ZNF541-205ENST00000595558 C3orf56Q8N813 242 aa10.78□□□□□ -0.68
ZNF541-205ENST00000595558 IGKV2-28A0A075B6P5 120 aa10.77□□□□□ -0.68
ZNF541-205ENST00000595558 TRGV2A0A075B6R0 118 aa10.77□□□□□ -0.68
ZNF541-205ENST00000595558 TRAV25A0A0B4J276 109 aa10.77□□□□□ -0.68
ZNF541-205ENST00000595558 IGKV2D-28P01615 120 aa10.77□□□□□ -0.68
ZNF541-205ENST00000595558 RNASE1P07998 156 aaKnown RBP10.77□□□□□ -0.69
ZNF541-205ENST00000595558 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
ZNF541-205ENST00000595558 STAB1Q9NY15 2570 aa10.76□□□□□ -0.69
ZNF541-205ENST00000595558 HERV-K104P63124 156 aa10.75□□□□□ -0.69
ZNF541-205ENST00000595558 MRPL23Q16540 153 aaKnown RBP10.75□□□□□ -0.69
ZNF541-205ENST00000595558 C9orf129Q5T035 196 aaKnown RBP10.75□□□□□ -0.69
ZNF541-205ENST00000595558 COX7B2Q8TF08 81 aa10.75□□□□□ -0.69
ZNF541-205ENST00000595558 TRBV7-7A0A0K0K1E9 115 aa10.74□□□□□ -0.69
ZNF541-205ENST00000595558 LY6G6DO95868 133 aa10.74□□□□□ -0.69
ZNF541-205ENST00000595558 TRACP01848 142 aa10.74□□□□□ -0.69
ZNF541-205ENST00000595558 FBN1P35555 2871 aaKnown RBP10.74□□□□□ -0.69
ZNF541-205ENST00000595558 SND1-IT1Q9HBX3 110 aa10.73□□□□□ -0.69
ZNF541-205ENST00000595558 A0A087WYN8 130 aa10.73□□□□□ -0.69
ZNF541-205ENST00000595558 IGLV1-51P01701 117 aa10.73□□□□□ -0.69
ZNF541-205ENST00000595558 COPS9Q8WXC6 57 aa10.73□□□□□ -0.69
ZNF541-205ENST00000595558 F8P00451 2351 aa10.73□□□□□ -0.69
ZNF541-205ENST00000595558 FAM236AA0A1B0GUQ0 79 aa10.72□□□□□ -0.69
ZNF541-205ENST00000595558 FAM236BA0A1B0GV22 79 aa10.72□□□□□ -0.69
ZNF541-205ENST00000595558 INAFM1C9JVW0 142 aa10.72□□□□□ -0.69
ZNF541-205ENST00000595558 DEFB4AO15263 64 aa10.72□□□□□ -0.69
ZNF541-205ENST00000595558 LINC00158P58513 81 aa10.72□□□□□ -0.69
ZNF541-205ENST00000595558 HILS1P60008 231 aa10.72□□□□□ -0.69
ZNF541-205ENST00000595558 C5orf38Q86SI9 138 aa10.72□□□□□ -0.69
ZNF541-205ENST00000595558 LINC00482Q8N8I6 264 aa10.72□□□□□ -0.69
ZNF541-205ENST00000595558 TRGV4A0A0C4DH28 118 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms