RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 C14orf177Q52M58 125 aa6.53□□□□□ -1.36
NOTCH3-203ENST00000595514 LCE2AQ5TA79 106 aaPredicted RBP6.53□□□□□ -1.36
NOTCH3-203ENST00000595514 ZNF664Q8N3J9 261 aa6.53□□□□□ -1.36
NOTCH3-203ENST00000595514 TMEM101Q96IK0 257 aa6.53□□□□□ -1.36
NOTCH3-203ENST00000595514 A0A0J9YXV3 536 aa6.52□□□□□ -1.37
NOTCH3-203ENST00000595514 ATP6V1G1O75348 118 aa6.52□□□□□ -1.37
NOTCH3-203ENST00000595514 C2orf66Q6UXQ4 117 aa6.52□□□□□ -1.37
NOTCH3-203ENST00000595514 CYSLTR1Q9Y271 337 aa6.52□□□□□ -1.37
NOTCH3-203ENST00000595514 IGLV10-54A0A075B6I4 117 aa6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 A0A096LNJ9 63 aa6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 LINC00959A0A1B0GUT2 108 aa6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 IGIPA6NJ69 53 aa6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 TRGC2P03986 189 aa6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 NPSP0C0P6 89 aa6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 PRSS3P2Q8NHM4 247 aa6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 TOMM6Q96B49 74 aa6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 OPRPNQ99935 248 aaPredicted RBP6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
NOTCH3-203ENST00000595514 S100A1P23297 94 aa6.5□□□□□ -1.37
NOTCH3-203ENST00000595514 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
NOTCH3-203ENST00000595514 RNASE13Q5GAN3 156 aaKnown RBP6.5□□□□□ -1.37
NOTCH3-203ENST00000595514 DGAT2L7PQ6IED9 249 aa6.5□□□□□ -1.37
NOTCH3-203ENST00000595514 LINC00173Q6ZV60 143 aa6.5□□□□□ -1.37
NOTCH3-203ENST00000595514 CHCHD10Q8WYQ3 142 aaPredicted RBP6.5□□□□□ -1.37
NOTCH3-203ENST00000595514 IGKV3OR2-268A0A0C4DH90 116 aa6.49□□□□□ -1.37
NOTCH3-203ENST00000595514 USP17L23D6RBM5 183 aa6.49□□□□□ -1.37
NOTCH3-203ENST00000595514 CCL25O15444 150 aa6.49□□□□□ -1.37
NOTCH3-203ENST00000595514 LINC00614P0C842 121 aa6.49□□□□□ -1.37
NOTCH3-203ENST00000595514 FOXI1Q12951 378 aa6.49□□□□□ -1.37
NOTCH3-203ENST00000595514 FA2HQ7L5A8 372 aa6.49□□□□□ -1.37
NOTCH3-203ENST00000595514 AMELXQ99217 191 aa6.49□□□□□ -1.37
NOTCH3-203ENST00000595514 TIMM17AQ99595 171 aa6.49□□□□□ -1.37
NOTCH3-203ENST00000595514 AP5S1Q9NUS5 200 aa6.49□□□□□ -1.37
NOTCH3-203ENST00000595514 GAGE12HA6NDE8 117 aa6.48□□□□□ -1.37
NOTCH3-203ENST00000595514 G0S2P27469 103 aa6.48□□□□□ -1.37
NOTCH3-203ENST00000595514 LINC00310P59036 64 aa6.48□□□□□ -1.37
NOTCH3-203ENST00000595514 TMEM141Q96I45 108 aa6.48□□□□□ -1.37
NOTCH3-203ENST00000595514 LINC01549A6NIU2 74 aa6.47□□□□□ -1.37
NOTCH3-203ENST00000595514 C1orf196B1AJZ1 125 aa6.47□□□□□ -1.37
NOTCH3-203ENST00000595514 PANO1I0J062 215 aa6.47□□□□□ -1.37
NOTCH3-203ENST00000595514 PRSS1P07477 247 aa6.47□□□□□ -1.37
NOTCH3-203ENST00000595514 SS18Q15532 418 aa6.47□□□□□ -1.37
NOTCH3-203ENST00000595514 CD164L2Q6UWJ8 174 aa6.47□□□□□ -1.37
NOTCH3-203ENST00000595514 ERASQ7Z444 233 aa6.47□□□□□ -1.37
NOTCH3-203ENST00000595514 FAM19A3Q7Z5A8 133 aa6.47□□□□□ -1.37
NOTCH3-203ENST00000595514 C15orf56Q8N910 161 aa6.47□□□□□ -1.37
NOTCH3-203ENST00000595514 TRAV13-1A0A0B4J241 112 aa6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 XCL1P47992 114 aa6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 UBE2D1P51668 147 aa6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 RAB5BP61020 215 aa6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 PDZD11Q5EBL8 140 aa6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 ZC2HC1BQ5TFG8 222 aa6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 REG3GQ6UW15 175 aa6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 C9orf163Q8N9P6 203 aa6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 CHCHD1Q96BP2 118 aaKnown RBP6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 DPH3Q96FX2 82 aa6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.38
NOTCH3-203ENST00000595514 IGHV3OR16-9A0A0B4J2B5 98 aa6.45□□□□□ -1.38
NOTCH3-203ENST00000595514 IFITM10A6NMD0 228 aa6.45□□□□□ -1.38
NOTCH3-203ENST00000595514 HBDP02042 147 aa6.45□□□□□ -1.38
NOTCH3-203ENST00000595514 TEX43Q6ZNM6 134 aa6.45□□□□□ -1.38
NOTCH3-203ENST00000595514 C7orf33Q8WU49 177 aa6.45□□□□□ -1.38
NOTCH3-203ENST00000595514 GVQW2A0A096LPI5 108 aaPredicted RBP6.44□□□□□ -1.38
NOTCH3-203ENST00000595514 COX6A2Q02221 97 aa6.44□□□□□ -1.38
NOTCH3-203ENST00000595514 PMCHL1Q16048 86 aa6.44□□□□□ -1.38
NOTCH3-203ENST00000595514 LINC00242Q5T6M2 205 aa6.44□□□□□ -1.38
NOTCH3-203ENST00000595514 SDIM1Q6ZPB5 146 aa6.44□□□□□ -1.38
NOTCH3-203ENST00000595514 SCGB3A1Q96QR1 104 aa6.44□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST1H2BKO60814 126 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 SLPIP03973 132 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST1H2BJP06899 126 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST1H2BOP23527 126 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST1H2BBP33778 126 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST1H2BDP58876 126 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 CNBPP62633 177 aaKnown RBP6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST1H2BCP62807 126 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST2H2BEQ16778 126 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 PAPPA-AS1Q5QFB9 102 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 Q6ZN92 141 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST1H2BHQ93079 126 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST1H2BNQ99877 126 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 HIST1H2BMQ99879 126 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 C2orf88Q9BSF0 95 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 VCX2Q9H322 139 aa6.43□□□□□ -1.38
NOTCH3-203ENST00000595514 IGHV1-58A0A0C4DH39 117 aa6.42□□□□□ -1.38
NOTCH3-203ENST00000595514 NUPR1O60356 82 aa6.42□□□□□ -1.38
NOTCH3-203ENST00000595514 SERF1AO75920 110 aa6.42□□□□□ -1.38
NOTCH3-203ENST00000595514 BAGE3Q86Y29 109 aa6.42□□□□□ -1.38
NOTCH3-203ENST00000595514 IGLV5-45A0A087WSX0 123 aa6.41□□□□□ -1.38
NOTCH3-203ENST00000595514 A0A087WYN8 130 aa6.41□□□□□ -1.38
NOTCH3-203ENST00000595514 A0A087WZ39 114 aa6.41□□□□□ -1.38
NOTCH3-203ENST00000595514 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.41□□□□□ -1.38
NOTCH3-203ENST00000595514 COX7A2LO14548 114 aa6.41□□□□□ -1.38
NOTCH3-203ENST00000595514 CIRBPQ14011 172 aaKnown RBP6.41□□□□□ -1.38
NOTCH3-203ENST00000595514 PMVKQ15126 192 aa6.41□□□□□ -1.38
NOTCH3-203ENST00000595514 CFAP161Q6P656 301 aa6.41□□□□□ -1.38
NOTCH3-203ENST00000595514 C5orf38Q86SI9 138 aa6.41□□□□□ -1.38
NOTCH3-203ENST00000595514 LINC01561Q8N1V8 128 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms