RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 KRTAP10-3P60369 221 aa12.32□□□□□ -0.44
SHKBP1-205ENST00000594973 RHOHQ15669 191 aa12.32□□□□□ -0.44
SHKBP1-205ENST00000594973 CXCL5P42830 114 aa12.31□□□□□ -0.44
SHKBP1-205ENST00000594973 C11orf72Q8NBR9 251 aa12.31□□□□□ -0.44
SHKBP1-205ENST00000594973 TENM1Q9UKZ4 2725 aa12.31□□□□□ -0.44
SHKBP1-205ENST00000594973 IGLV1-51P01701 117 aa12.3□□□□□ -0.44
SHKBP1-205ENST00000594973 CEMP1Q6PRD7 247 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-205ENST00000594973 SDIM1Q6ZPB5 146 aa12.29□□□□□ -0.44
SHKBP1-205ENST00000594973 CLEC2BQ92478 149 aa12.29□□□□□ -0.44
SHKBP1-205ENST00000594973 C1orf158Q8N1D5 194 aa12.29□□□□□ -0.44
SHKBP1-205ENST00000594973 LOC107984640A0A0U1RRK4 108 aa12.28□□□□□ -0.44
SHKBP1-205ENST00000594973 I3L3M4 83 aa12.28□□□□□ -0.44
SHKBP1-205ENST00000594973 FAM19A5Q7Z5A7 132 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-205ENST00000594973 FLNBO75369 2602 aaKnown RBP12.28□□□□□ -0.44
SHKBP1-205ENST00000594973 COX7CP15954 63 aa12.28□□□□□ -0.44
SHKBP1-205ENST00000594973 MIAQ16674 131 aa12.28□□□□□ -0.44
SHKBP1-205ENST00000594973 PRSS2P07478 247 aa12.27□□□□□ -0.44
SHKBP1-205ENST00000594973 IGHV3-30-3P0DP02 117 aa12.27□□□□□ -0.44
SHKBP1-205ENST00000594973 CRYGAP11844 174 aa12.27□□□□□ -0.44
SHKBP1-205ENST00000594973 C5orf38Q86SI9 138 aa12.27□□□□□ -0.44
SHKBP1-205ENST00000594973 OR13C6PQ8NH95 151 aa12.27□□□□□ -0.44
SHKBP1-205ENST00000594973 Q9UF83 564 aa12.27□□□□□ -0.44
SHKBP1-205ENST00000594973 PF4P02776 101 aa12.27□□□□□ -0.45
SHKBP1-205ENST00000594973 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-205ENST00000594973 Q6ZSN1 163 aa12.27□□□□□ -0.45
SHKBP1-205ENST00000594973 LINC00467Q9BRT7 94 aa12.27□□□□□ -0.45
SHKBP1-205ENST00000594973 IGHV3-64A0A075B6Q5 118 aa12.26□□□□□ -0.45
SHKBP1-205ENST00000594973 TIMM21Q9BVV7 248 aa12.26□□□□□ -0.45
SHKBP1-205ENST00000594973 A0A0J9YXV3 536 aa12.25□□□□□ -0.45
SHKBP1-205ENST00000594973 SMCR5Q8TEV8 140 aa12.25□□□□□ -0.45
SHKBP1-205ENST00000594973 OPRPNQ99935 248 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-205ENST00000594973 TRAV8-3A0A0A6YYJ7 113 aa12.24□□□□□ -0.45
SHKBP1-205ENST00000594973 GAGE2AQ6NT46 116 aa12.24□□□□□ -0.45
SHKBP1-205ENST00000594973 C20orf203Q8NBC4 194 aa12.24□□□□□ -0.45
SHKBP1-205ENST00000594973 ATRQ13535 2644 aa12.24□□□□□ -0.45
SHKBP1-205ENST00000594973 BEAN1Q3B7T3 259 aa12.23□□□□□ -0.45
SHKBP1-205ENST00000594973 ADAMTSL4-AS1Q5T5F5 129 aa12.23□□□□□ -0.45
SHKBP1-205ENST00000594973 NACAE9PAV3 2078 aa12.23□□□□□ -0.45
SHKBP1-205ENST00000594973 IGLV4-3A0A075B6K6 122 aa12.23□□□□□ -0.45
SHKBP1-205ENST00000594973 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
SHKBP1-205ENST00000594973 TIMM17BO60830 172 aa12.23□□□□□ -0.45
SHKBP1-205ENST00000594973 GIG44P09565 113 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-205ENST00000594973 CMC4P56277 68 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-205ENST00000594973 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
SHKBP1-205ENST00000594973 C19orf73Q9NVV2 129 aa12.23□□□□□ -0.45
SHKBP1-205ENST00000594973 C2orf48Q96LS8 159 aa12.22□□□□□ -0.45
SHKBP1-205ENST00000594973 IGHV1-58A0A0C4DH39 117 aa12.22□□□□□ -0.45
SHKBP1-205ENST00000594973 NDUFA12Q9UI09 145 aa12.22□□□□□ -0.45
SHKBP1-205ENST00000594973 ATOX1O00244 68 aa12.21□□□□□ -0.45
SHKBP1-205ENST00000594973 HIST1H4AP62805 103 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-205ENST00000594973 MRPS36P82909 103 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-205ENST00000594973 LINC00482Q8N8I6 264 aa12.21□□□□□ -0.46
SHKBP1-205ENST00000594973 EDA2RQ9HAV5 297 aa12.21□□□□□ -0.46
SHKBP1-205ENST00000594973 KLK5Q9Y337 293 aaPredicted RBP12.2□□□□□ -0.46
SHKBP1-205ENST00000594973 PYGO1Q9Y3Y4 419 aa12.2□□□□□ -0.46
SHKBP1-205ENST00000594973 DAND5Q8N907 189 aa12.2□□□□□ -0.46
SHKBP1-205ENST00000594973 RS1O15537 224 aa12.19□□□□□ -0.46
SHKBP1-205ENST00000594973 Q6ZTI0 123 aa12.19□□□□□ -0.46
SHKBP1-205ENST00000594973 TRRAPQ9Y4A5 3859 aa12.19□□□□□ -0.46
SHKBP1-205ENST00000594973 IGHV3-53P01767 116 aa12.19□□□□□ -0.46
SHKBP1-205ENST00000594973 SPATA3Q8NHX4 192 aa12.19□□□□□ -0.46
SHKBP1-205ENST00000594973 IGHV3-38A0A0C4DH36 116 aa12.18□□□□□ -0.46
SHKBP1-205ENST00000594973 IL17DQ8TAD2 202 aa12.18□□□□□ -0.46
SHKBP1-205ENST00000594973 NOP10Q9NPE3 64 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-205ENST00000594973 NBEAL2Q6ZNJ1 2754 aa12.17□□□□□ -0.46
SHKBP1-205ENST00000594973 COX7A2LO14548 114 aa12.17□□□□□ -0.46
SHKBP1-205ENST00000594973 TEP1Q99973 2627 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-205ENST00000594973 VSIG2Q96IQ7 327 aa12.17□□□□□ -0.46
SHKBP1-205ENST00000594973 TRACP01848 142 aa12.16□□□□□ -0.46
SHKBP1-205ENST00000594973 TMEM258P61165 79 aa12.16□□□□□ -0.46
SHKBP1-205ENST00000594973 FAM222AQ5U5X8 452 aa12.15□□□□□ -0.46
SHKBP1-205ENST00000594973 INAFM2P0DMQ5 153 aa12.15□□□□□ -0.46
SHKBP1-205ENST00000594973 DAZ2Q13117 558 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-205ENST00000594973 DAZ4Q86SG3 579 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-205ENST00000594973 CSNK1G2-AS1Q8NCQ2 148 aa12.14□□□□□ -0.47
SHKBP1-205ENST00000594973 DAZ3Q9NR90 486 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-205ENST00000594973 TINCRA0A1B0GVN0 87 aa12.14□□□□□ -0.47
SHKBP1-205ENST00000594973 F8P00451 2351 aa12.13□□□□□ -0.47
SHKBP1-205ENST00000594973 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-205ENST00000594973 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-205ENST00000594973 IGKV2-29A2NJV5 120 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-205ENST00000594973 RNASE13Q5GAN3 156 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-205ENST00000594973 C16orf74Q96GX8 76 aa12.12□□□□□ -0.47
SHKBP1-205ENST00000594973 PLAC8L1A1L4L8 177 aa12.12□□□□□ -0.47
SHKBP1-205ENST00000594973 NPC2P61916 151 aa12.12□□□□□ -0.47
SHKBP1-205ENST00000594973 DPH3Q96FX2 82 aa12.12□□□□□ -0.47
SHKBP1-205ENST00000594973 hADV29S1A0JD25 119 aa12.11□□□□□ -0.47
SHKBP1-205ENST00000594973 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
SHKBP1-205ENST00000594973 CHCHD7Q9BUK0 85 aa12.11□□□□□ -0.47
SHKBP1-205ENST00000594973 TRGV2A0A075B6R0 118 aa12.11□□□□□ -0.47
SHKBP1-205ENST00000594973 BAALC-AS2P0C853 105 aa12.11□□□□□ -0.47
SHKBP1-205ENST00000594973 RPL18AQ02543 176 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-205ENST00000594973 COPS9Q8WXC6 57 aa12.11□□□□□ -0.47
SHKBP1-205ENST00000594973 TIRAPP58753 221 aa12.1□□□□□ -0.47
SHKBP1-205ENST00000594973 CIRBPQ14011 172 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-205ENST00000594973 NDUFA1O15239 70 aa12.09□□□□□ -0.47
SHKBP1-205ENST00000594973 K7EQD1 137 aa12.09□□□□□ -0.47
SHKBP1-205ENST00000594973 C9orf66Q5T8R8 295 aa12.08□□□□□ -0.48
SHKBP1-205ENST00000594973 SERP2Q8N6R1 65 aa12.08□□□□□ -0.48
SHKBP1-205ENST00000594973 UBE2D4Q9Y2X8 147 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms