RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 H3BRM9 83 aa10.98□□□□□ -0.65
USHBP1-204ENST00000594190 RTL8CO15255 209 aa10.98□□□□□ -0.65
USHBP1-204ENST00000594190 RNASE13Q5GAN3 156 aaKnown RBP10.98□□□□□ -0.65
USHBP1-204ENST00000594190 MRPS16Q9Y3D3 137 aaKnown RBP10.98□□□□□ -0.65
USHBP1-204ENST00000594190 RYR1P21817 5038 aa10.97□□□□□ -0.65
USHBP1-204ENST00000594190 IGLV5-45A0A087WSX0 123 aa10.97□□□□□ -0.65
USHBP1-204ENST00000594190 TMEM170BQ5T4T1 132 aa10.97□□□□□ -0.65
USHBP1-204ENST00000594190 Q6ZR54 194 aa10.97□□□□□ -0.65
USHBP1-204ENST00000594190 TRAV13-1A0A0B4J241 112 aa10.96□□□□□ -0.65
USHBP1-204ENST00000594190 SS18Q15532 418 aa10.96□□□□□ -0.65
USHBP1-204ENST00000594190 LINC01556Q5JQF7 62 aa10.96□□□□□ -0.65
USHBP1-204ENST00000594190 UPK3BQ9BT76 320 aa10.96□□□□□ -0.65
USHBP1-204ENST00000594190 E9PLD3 99 aa10.95□□□□□ -0.66
USHBP1-204ENST00000594190 ANGP03950 147 aaKnown RBP10.95□□□□□ -0.66
USHBP1-204ENST00000594190 ZNF22P17026 224 aaPredicted RBP10.95□□□□□ -0.66
USHBP1-204ENST00000594190 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
USHBP1-204ENST00000594190 LINC00242Q5T6M2 205 aa10.95□□□□□ -0.66
USHBP1-204ENST00000594190 STPG4Q8N801 248 aa10.95□□□□□ -0.66
USHBP1-204ENST00000594190 K7EP13 123 aa10.94□□□□□ -0.66
USHBP1-204ENST00000594190 DNAH10OSP0CZ25 163 aa10.94□□□□□ -0.66
USHBP1-204ENST00000594190 LINC00469Q8N7U9 141 aa10.94□□□□□ -0.66
USHBP1-204ENST00000594190 UQCR10Q9UDW1 63 aa10.94□□□□□ -0.66
USHBP1-204ENST00000594190 LINC00959A0A1B0GUT2 108 aa10.93□□□□□ -0.66
USHBP1-204ENST00000594190 TMEM223A0PJW6 202 aa10.93□□□□□ -0.66
USHBP1-204ENST00000594190 REG3AQ06141 175 aa10.93□□□□□ -0.66
USHBP1-204ENST00000594190 ANKRD39Q53RE8 183 aa10.93□□□□□ -0.66
USHBP1-204ENST00000594190 WFDC10BQ8IUB3 73 aa10.93□□□□□ -0.66
USHBP1-204ENST00000594190 LINC00269Q8N2A0 174 aa10.93□□□□□ -0.66
USHBP1-204ENST00000594190 PRR34Q9NV39 138 aa10.93□□□□□ -0.66
USHBP1-204ENST00000594190 TRAV8-4A0A0B4J246 113 aa10.92□□□□□ -0.66
USHBP1-204ENST00000594190 DLEU1O43261 78 aa10.92□□□□□ -0.66
USHBP1-204ENST00000594190 CRPP02741 224 aa10.92□□□□□ -0.66
USHBP1-204ENST00000594190 COX8AP10176 69 aa10.92□□□□□ -0.66
USHBP1-204ENST00000594190 LINC01561Q8N1V8 128 aa10.92□□□□□ -0.66
USHBP1-204ENST00000594190 MIEN1Q9BRT3 115 aa10.92□□□□□ -0.66
USHBP1-204ENST00000594190 LINC00588Q9Y4M8 146 aa10.92□□□□□ -0.66
USHBP1-204ENST00000594190 HSPG2P98160 4391 aa10.92□□□□□ -0.66
USHBP1-204ENST00000594190 SIVA1O15304 175 aa10.91□□□□□ -0.66
USHBP1-204ENST00000594190 NMUP48645 174 aa10.91□□□□□ -0.66
USHBP1-204ENST00000594190 MIAQ16674 131 aa10.91□□□□□ -0.66
USHBP1-204ENST00000594190 SLC25A34Q6PIV7 304 aa10.91□□□□□ -0.66
USHBP1-204ENST00000594190 C10orf126Q8N4M7 172 aa10.91□□□□□ -0.66
USHBP1-204ENST00000594190 PLEKHB2Q96CS7 222 aa10.91□□□□□ -0.66
USHBP1-204ENST00000594190 PRO1933Q9H354 126 aa10.91□□□□□ -0.66
USHBP1-204ENST00000594190 KLK12Q9UKR0 248 aa10.9□□□□□ -0.66
USHBP1-204ENST00000594190 IGHV1-58A0A0C4DH39 117 aa10.89□□□□□ -0.67
USHBP1-204ENST00000594190 IGKV3OR2-268A0A0C4DH90 116 aa10.89□□□□□ -0.67
USHBP1-204ENST00000594190 M0R2N4 97 aa10.89□□□□□ -0.67
USHBP1-204ENST00000594190 LEPROTO15243 131 aa10.89□□□□□ -0.67
USHBP1-204ENST00000594190 CD164L2Q6UWJ8 174 aa10.89□□□□□ -0.67
USHBP1-204ENST00000594190 CDKN2A-AS1Q9UH64 79 aa10.89□□□□□ -0.67
USHBP1-204ENST00000594190 IGHV3OR16-9A0A0B4J2B5 98 aa10.88□□□□□ -0.67
USHBP1-204ENST00000594190 IGHV3-30P01768 117 aa10.88□□□□□ -0.67
USHBP1-204ENST00000594190 IGHV3-33P01772 117 aa10.88□□□□□ -0.67
USHBP1-204ENST00000594190 IGHV3-30-3P0DP02 117 aa10.88□□□□□ -0.67
USHBP1-204ENST00000594190 IGHV3-30-5P0DP03 117 aa10.88□□□□□ -0.67
USHBP1-204ENST00000594190 BOD1L2Q8IYS8 172 aa10.88□□□□□ -0.67
USHBP1-204ENST00000594190 C14orf144Q96I85 54 aa10.88□□□□□ -0.67
USHBP1-204ENST00000594190 LRP1BQ9NZR2 4599 aa10.87□□□□□ -0.67
USHBP1-204ENST00000594190 A0A087WZ39 114 aa10.87□□□□□ -0.67
USHBP1-204ENST00000594190 LGALS3P17931 250 aaKnown RBP10.87□□□□□ -0.67
USHBP1-204ENST00000594190 COX6A2Q02221 97 aa10.87□□□□□ -0.67
USHBP1-204ENST00000594190 UBE2DNLQ8IWF7 75 aa10.87□□□□□ -0.67
USHBP1-204ENST00000594190 IGKV2D-26A0A0A0MRZ7 120 aa10.86□□□□□ -0.67
USHBP1-204ENST00000594190 J3QQQ9 107 aa10.86□□□□□ -0.67
USHBP1-204ENST00000594190 DDTP30046 118 aa10.86□□□□□ -0.67
USHBP1-204ENST00000594190 Q8N3U1 123 aa10.86□□□□□ -0.67
USHBP1-204ENST00000594190 CHCHD10Q8WYQ3 142 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-204ENST00000594190 ABCA13Q86UQ4 5058 aa10.85□□□□□ -0.67
USHBP1-204ENST00000594190 IGLV5-39A0A0G2JS06 123 aa10.85□□□□□ -0.67
USHBP1-204ENST00000594190 CLPSL2Q6UWE3 100 aa10.85□□□□□ -0.67
USHBP1-204ENST00000594190 ENHOQ6UWT2 76 aa10.85□□□□□ -0.67
USHBP1-204ENST00000594190 UBE2WQ96B02 151 aa10.85□□□□□ -0.67
USHBP1-204ENST00000594190 TRAV8-3A0A0A6YYJ7 113 aa10.84□□□□□ -0.67
USHBP1-204ENST00000594190 SMIM1B2RUZ4 78 aa10.84□□□□□ -0.67
USHBP1-204ENST00000594190 COX7A2LO14548 114 aa10.84□□□□□ -0.67
USHBP1-204ENST00000594190 SPINK8P0C7L1 97 aa10.84□□□□□ -0.67
USHBP1-204ENST00000594190 XCL1P47992 114 aa10.84□□□□□ -0.67
USHBP1-204ENST00000594190 HNRNPA3P51991 378 aaKnown RBP10.84□□□□□ -0.67
USHBP1-204ENST00000594190 Q9H8V8 135 aa10.84□□□□□ -0.67
USHBP1-204ENST00000594190 MYMXA0A1B0GTQ4 84 aa10.83□□□□□ -0.68
USHBP1-204ENST00000594190 PCP4L1A6NKN8 68 aa10.83□□□□□ -0.68
USHBP1-204ENST00000594190 IBA57-AS1B1ANH7 110 aa10.83□□□□□ -0.68
USHBP1-204ENST00000594190 SFTA2Q6UW10 78 aa10.83□□□□□ -0.68
USHBP1-204ENST00000594190 PCP2Q8IVA1 136 aa10.83□□□□□ -0.68
USHBP1-204ENST00000594190 RMI2Q96E14 147 aa10.83□□□□□ -0.68
USHBP1-204ENST00000594190 KRTAP4-5Q9BYR2 181 aa10.83□□□□□ -0.68
USHBP1-204ENST00000594190 APOMO95445 188 aa10.82□□□□□ -0.68
USHBP1-204ENST00000594190 HIGD1BQ9P298 99 aa10.82□□□□□ -0.68
USHBP1-204ENST00000594190 APOBP04114 4563 aaKnown RBP10.81□□□□□ -0.68
USHBP1-204ENST00000594190 ZNF815PA8K554 130 aa10.81□□□□□ -0.68
USHBP1-204ENST00000594190 C1orf43Q9BWL3 253 aa10.81□□□□□ -0.68
USHBP1-204ENST00000594190 DNAH5Q8TE73 4624 aa10.8□□□□□ -0.68
USHBP1-204ENST00000594190 MALP21145 153 aa10.8□□□□□ -0.68
USHBP1-204ENST00000594190 FOXI1Q12951 378 aa10.8□□□□□ -0.68
USHBP1-204ENST00000594190 TTC32Q5I0X7 151 aa10.8□□□□□ -0.68
USHBP1-204ENST00000594190 COX11Q9Y6N1 276 aa10.8□□□□□ -0.68
USHBP1-204ENST00000594190 IGLV10-54A0A075B6I4 117 aa10.79□□□□□ -0.68
USHBP1-204ENST00000594190 IGHV3-64A0A075B6Q5 118 aa10.79□□□□□ -0.68
USHBP1-204ENST00000594190 GAGE12HA6NDE8 117 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms