RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 NTF3P20783 257 aa4.66□□□□□ -1.66
VAT1-209ENST00000592388 FOXA3P55318 350 aaPredicted RBP4.66□□□□□ -1.66
VAT1-209ENST00000592388 CNBPP62633 177 aaKnown RBP4.66□□□□□ -1.66
VAT1-209ENST00000592388 CIRBPQ14011 172 aaKnown RBP4.66□□□□□ -1.66
VAT1-209ENST00000592388 HIGD2BQ4VC39 106 aa4.66□□□□□ -1.66
VAT1-209ENST00000592388 GATD1Q8NB37 220 aa4.66□□□□□ -1.66
VAT1-209ENST00000592388 SPACA4Q8TDM5 124 aa4.66□□□□□ -1.66
VAT1-209ENST00000592388 PGLYRP4Q96LB8 373 aa4.66□□□□□ -1.66
VAT1-209ENST00000592388 RNASE7Q9H1E1 156 aaKnown RBP4.66□□□□□ -1.66
VAT1-209ENST00000592388 NAT8Q9UHE5 227 aa4.66□□□□□ -1.66
VAT1-209ENST00000592388 IGHV3-64A0A075B6Q5 118 aa4.65□□□□□ -1.67
VAT1-209ENST00000592388 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.65□□□□□ -1.67
VAT1-209ENST00000592388 A0A087WYN8 130 aa4.65□□□□□ -1.67
VAT1-209ENST00000592388 A0A1B0GUV1 79 aa4.65□□□□□ -1.67
VAT1-209ENST00000592388 IGKV2-29A2NJV5 120 aaPredicted RBP4.65□□□□□ -1.67
VAT1-209ENST00000592388 GAGE12HA6NDE8 117 aa4.65□□□□□ -1.67
VAT1-209ENST00000592388 F2Z2F3 143 aa4.65□□□□□ -1.67
VAT1-209ENST00000592388 UBE2L6O14933 153 aa4.65□□□□□ -1.67
VAT1-209ENST00000592388 PDE6DO43924 150 aa4.65□□□□□ -1.67
VAT1-209ENST00000592388 SRSF3P84103 164 aaKnown RBP4.65□□□□□ -1.67
VAT1-209ENST00000592388 TWIST1Q15672 202 aa4.65□□□□□ -1.67
VAT1-209ENST00000592388 GTF2H5Q6ZYL4 71 aa4.65□□□□□ -1.67
VAT1-209ENST00000592388 RPP21Q9H633 154 aaKnown RBP4.65□□□□□ -1.67
VAT1-209ENST00000592388 LAMTOR2Q9Y2Q5 125 aa4.65□□□□□ -1.67
VAT1-209ENST00000592388 TRAV8-4A0A0B4J246 113 aa4.64□□□□□ -1.67
VAT1-209ENST00000592388 IGKV2-24A0A0C4DH68 120 aa4.64□□□□□ -1.67
VAT1-209ENST00000592388 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
VAT1-209ENST00000592388 COX6A2Q02221 97 aa4.64□□□□□ -1.67
VAT1-209ENST00000592388 MRPL54Q6P161 138 aaKnown RBP4.64□□□□□ -1.67
VAT1-209ENST00000592388 GTSF1Q8WW33 167 aa4.64□□□□□ -1.67
VAT1-209ENST00000592388 CNFNQ9BYD5 112 aa4.64□□□□□ -1.67
VAT1-209ENST00000592388 AP5S1Q9NUS5 200 aa4.64□□□□□ -1.67
VAT1-209ENST00000592388 TRAV9-1A0A075B6T8 112 aa4.63□□□□□ -1.67
VAT1-209ENST00000592388 ESDP10768 282 aa4.63□□□□□ -1.67
VAT1-209ENST00000592388 VAMP3Q15836 100 aa4.63□□□□□ -1.67
VAT1-209ENST00000592388 PMCHL1Q16048 86 aa4.63□□□□□ -1.67
VAT1-209ENST00000592388 PRSS3P2Q8NHM4 247 aa4.63□□□□□ -1.67
VAT1-209ENST00000592388 OCC1Q8TAD7 63 aa4.63□□□□□ -1.67
VAT1-209ENST00000592388 CHCHD10Q8WYQ3 142 aaPredicted RBP4.63□□□□□ -1.67
VAT1-209ENST00000592388 ANAPC16Q96DE5 110 aa4.63□□□□□ -1.67
VAT1-209ENST00000592388 LINC00526Q96FQ7 95 aa4.63□□□□□ -1.67
VAT1-209ENST00000592388 SPANXCQ9NY87 97 aa4.63□□□□□ -1.67
VAT1-209ENST00000592388 A0A096LNI7 61 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.62□□□□□ -1.67
VAT1-209ENST00000592388 SDHAF1A6NFY7 115 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 APCSP02743 223 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 FGF6P10767 208 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 COX19Q49B96 90 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 PDZD11Q5EBL8 140 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 AMMECR1LQ6DCA0 310 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 RNASEKQ6P5S7 137 aaKnown RBP4.62□□□□□ -1.67
VAT1-209ENST00000592388 OR5A1Q8NGJ0 315 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 DPH3Q96FX2 82 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 SIGMAR1Q99720 223 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 PLAC8Q9NZF1 115 aa4.62□□□□□ -1.67
VAT1-209ENST00000592388 GVQW2A0A096LPI5 108 aaPredicted RBP4.61□□□□□ -1.67
VAT1-209ENST00000592388 FAM231BA6NCW3 169 aa4.61□□□□□ -1.67
VAT1-209ENST00000592388 XCL1P47992 114 aa4.61□□□□□ -1.67
VAT1-209ENST00000592388 FOXI1Q12951 378 aa4.61□□□□□ -1.67
VAT1-209ENST00000592388 BATFQ16520 125 aa4.61□□□□□ -1.67
VAT1-209ENST00000592388 MRAP2Q96G30 205 aa4.61□□□□□ -1.67
VAT1-209ENST00000592388 NCR2O95944 276 aa4.6□□□□□ -1.67
VAT1-209ENST00000592388 TSHBP01222 138 aa4.6□□□□□ -1.67
VAT1-209ENST00000592388 PRR3P79522 188 aaKnown RBP4.6□□□□□ -1.67
VAT1-209ENST00000592388 STPG4Q8N801 248 aa4.6□□□□□ -1.67
VAT1-209ENST00000592388 RNF185Q96GF1 192 aa4.6□□□□□ -1.67
VAT1-209ENST00000592388 VCX2Q9H322 139 aa4.6□□□□□ -1.67
VAT1-209ENST00000592388 C9JQL5 133 aa4.59□□□□□ -1.67
VAT1-209ENST00000592388 SMKR1H3BMG3 65 aa4.59□□□□□ -1.67
VAT1-209ENST00000592388 I3L3M4 83 aa4.59□□□□□ -1.67
VAT1-209ENST00000592388 CKS1BP61024 79 aa4.59□□□□□ -1.67
VAT1-209ENST00000592388 RPL24P83731 157 aaKnown RBP4.59□□□□□ -1.67
VAT1-209ENST00000592388 REG3GQ6UW15 175 aa4.59□□□□□ -1.67
VAT1-209ENST00000592388 Q6ZN92 141 aa4.59□□□□□ -1.67
VAT1-209ENST00000592388 FA2HQ7L5A8 372 aa4.59□□□□□ -1.67
VAT1-209ENST00000592388 C7orf33Q8WU49 177 aa4.59□□□□□ -1.67
VAT1-209ENST00000592388 PMCHL2Q9BQD1 86 aa4.59□□□□□ -1.67
VAT1-209ENST00000592388 TRBV6-5A0A0K0K1A5 114 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 LINC00959A0A1B0GUT2 108 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 A6NDN8 102 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 TSPAN13O95857 204 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 SRP19P09132 144 aaKnown RBP4.58□□□□□ -1.68
VAT1-209ENST00000592388 IGLC3P0DOY3 106 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 PMCHP20382 165 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 SEC11AP67812 179 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 ADIRFQ15847 76 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 RNASE13Q5GAN3 156 aaKnown RBP4.58□□□□□ -1.68
VAT1-209ENST00000592388 FAM231DQ6ZW35 169 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 AMN1Q8IY45 258 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 CARD19Q96LW7 228 aa4.58□□□□□ -1.68
VAT1-209ENST00000592388 HIGD1CA8MV81 97 aa4.57□□□□□ -1.68
VAT1-209ENST00000592388 A8MWL6 223 aa4.57□□□□□ -1.68
VAT1-209ENST00000592388 TMEM250H0YL14 139 aa4.57□□□□□ -1.68
VAT1-209ENST00000592388 H7C423 109 aa4.57□□□□□ -1.68
VAT1-209ENST00000592388 MT-ND6P03923 174 aa4.57□□□□□ -1.68
VAT1-209ENST00000592388 PRR4Q16378 134 aa4.57□□□□□ -1.68
VAT1-209ENST00000592388 SMIM7Q9BQ49 75 aa4.57□□□□□ -1.68
VAT1-209ENST00000592388 SPANXDQ9BXN6 97 aa4.57□□□□□ -1.68
VAT1-209ENST00000592388 ST20Q9HBF5 79 aa4.57□□□□□ -1.68
VAT1-209ENST00000592388 IGHV1-58A0A0C4DH39 117 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms