RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 ZNF345Q14585 488 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 KIAA0087Q14695 138 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 ZNF726P1Q15940 193 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 RNASE13Q5GAN3 156 aaKnown RBP3.48□□□□□ -1.85
DNMT1-222ENST00000590619 TMUB2Q71RG4 321 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 BAGE2Q86Y30 109 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 PACRGQ96M98 296 aaPredicted RBP3.48□□□□□ -1.85
DNMT1-222ENST00000590619 LINC00167Q96N53 147 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 TNFSF18Q9UNG2 199 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 IGHV3OR16-9A0A0B4J2B5 98 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 KANTRA0A1W2PQU2 76 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 MBP02144 154 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 H2AFB1P0C5Y9 115 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 TRGC1P0CF51 173 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 S100A1P23297 94 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 UBE2AP49459 152 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 FOXA3P55318 350 aaPredicted RBP3.47□□□□□ -1.85
DNMT1-222ENST00000590619 MRPL55Q7Z7F7 128 aaKnown RBP3.47□□□□□ -1.85
DNMT1-222ENST00000590619 SLC51BQ86UW2 128 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 KCNRGQ8N5I3 272 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 LINC00469Q8N7U9 141 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 PLEKHB2Q96CS7 222 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 FAM210AQ96ND0 272 aa3.47□□□□□ -1.85
DNMT1-222ENST00000590619 TRBV30A0A0K0K1B3 111 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 ZNF727A8MUV8 499 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 F2Z2F3 143 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 SPINK1P00995 79 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 AKR1C3P42330 323 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 RAB14P61106 215 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 SERF2P84101 59 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 CLLU1Q5K131 121 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 LYZL1Q6UWQ5 148 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 C2orf82Q6UX34 121 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 MRAP2Q96G30 205 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 PSMG3Q9BT73 122 aaPredicted RBP3.46□□□□□ -1.86
DNMT1-222ENST00000590619 RNASE7Q9H1E1 156 aaKnown RBP3.46□□□□□ -1.86
DNMT1-222ENST00000590619 TP73-AS1Q9UF72 201 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 CSDC2Q9Y534 153 aaKnown RBP3.46□□□□□ -1.86
DNMT1-222ENST00000590619 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.86
DNMT1-222ENST00000590619 SCO2A0A1W2PP80 73 aa3.45□□□□□ -1.86
DNMT1-222ENST00000590619 LINC00862A6NCI5 91 aa3.45□□□□□ -1.86
DNMT1-222ENST00000590619 FHITP49789 147 aa3.45□□□□□ -1.86
DNMT1-222ENST00000590619 CST9LP1Q5W188 147 aa3.45□□□□□ -1.86
DNMT1-222ENST00000590619 ALKAL2Q6UX46 152 aa3.45□□□□□ -1.86
DNMT1-222ENST00000590619 COMMD7Q86VX2 200 aa3.45□□□□□ -1.86
DNMT1-222ENST00000590619 Q8NBF4 154 aa3.45□□□□□ -1.86
DNMT1-222ENST00000590619 STOML3Q8TAV4 291 aa3.45□□□□□ -1.86
DNMT1-222ENST00000590619 XAGE1AQ9HD64 81 aa3.45□□□□□ -1.86
DNMT1-222ENST00000590619 TMEM242Q9NWH2 141 aa3.45□□□□□ -1.86
DNMT1-222ENST00000590619 TRBV6-5A0A0K0K1A5 114 aa3.44□□□□□ -1.86
DNMT1-222ENST00000590619 GAGE10A6NGK3 116 aa3.44□□□□□ -1.86
DNMT1-222ENST00000590619 S100A9P06702 114 aaKnown RBP3.44□□□□□ -1.86
DNMT1-222ENST00000590619 RPS20P60866 119 aaKnown RBP3.44□□□□□ -1.86
DNMT1-222ENST00000590619 TWIST1Q15672 202 aa3.44□□□□□ -1.86
DNMT1-222ENST00000590619 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
DNMT1-222ENST00000590619 Q8N377 158 aa3.44□□□□□ -1.86
DNMT1-222ENST00000590619 TCEAL7Q9BRU2 100 aa3.44□□□□□ -1.86
DNMT1-222ENST00000590619 LINC00846Q9NV44 126 aa3.44□□□□□ -1.86
DNMT1-222ENST00000590619 NDUFA12Q9UI09 145 aa3.44□□□□□ -1.86
DNMT1-222ENST00000590619 CTXND1A0A1B0GTU2 59 aa3.43□□□□□ -1.86
DNMT1-222ENST00000590619 C7orf77A4D0Y5 90 aa3.43□□□□□ -1.86
DNMT1-222ENST00000590619 POLR2KP53803 58 aaKnown RBP3.43□□□□□ -1.86
DNMT1-222ENST00000590619 RPL32P62910 135 aaKnown RBP3.43□□□□□ -1.86
DNMT1-222ENST00000590619 PRLHP81277 87 aa3.43□□□□□ -1.86
DNMT1-222ENST00000590619 FAM104AQ969W3 186 aa3.43□□□□□ -1.86
DNMT1-222ENST00000590619 KRTAP9-3Q9BYQ3 159 aa3.43□□□□□ -1.86
DNMT1-222ENST00000590619 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
DNMT1-222ENST00000590619 MED9Q9NWA0 146 aa3.43□□□□□ -1.86
DNMT1-222ENST00000590619 PAGE4O60829 102 aa3.42□□□□□ -1.86
DNMT1-222ENST00000590619 PNRC1Q12796 327 aaPredicted RBP3.42□□□□□ -1.86
DNMT1-222ENST00000590619 RPL7L1Q6DKI1 246 aaKnown RBP3.42□□□□□ -1.86
DNMT1-222ENST00000590619 Q6ZUT4 128 aa3.42□□□□□ -1.86
DNMT1-222ENST00000590619 BORCS7-ASMTA0A0B4J1R7 106 aa3.41□□□□□ -1.86
DNMT1-222ENST00000590619 TRBV27A0A0K0K1C4 114 aa3.41□□□□□ -1.86
DNMT1-222ENST00000590619 SLC25A20O43772 301 aa3.41□□□□□ -1.86
DNMT1-222ENST00000590619 IFNA1P01562 189 aa3.41□□□□□ -1.86
DNMT1-222ENST00000590619 MT2AP02795 61 aa3.41□□□□□ -1.86
DNMT1-222ENST00000590619 CNFNQ9BYD5 112 aa3.41□□□□□ -1.86
DNMT1-222ENST00000590619 ST20Q9HBF5 79 aa3.41□□□□□ -1.86
DNMT1-222ENST00000590619 TEX46H3BTG2 121 aa3.4□□□□□ -1.87
DNMT1-222ENST00000590619 FAM19A1Q7Z5A9 133 aa3.4□□□□□ -1.87
DNMT1-222ENST00000590619 XKRY2A2RUG3 117 aa3.39□□□□□ -1.87
DNMT1-222ENST00000590619 VCYO14598 125 aa3.39□□□□□ -1.87
DNMT1-222ENST00000590619 RPS29P62273 56 aaKnown RBP3.39□□□□□ -1.87
DNMT1-222ENST00000590619 BLOC1S1P78537 153 aa3.39□□□□□ -1.87
DNMT1-222ENST00000590619 UQCC3Q6UW78 93 aa3.39□□□□□ -1.87
DNMT1-222ENST00000590619 CBLN2Q8IUK8 224 aa3.39□□□□□ -1.87
DNMT1-222ENST00000590619 FAM19A2Q8N3H0 131 aa3.39□□□□□ -1.87
DNMT1-222ENST00000590619 SPRR4Q96PI1 79 aa3.39□□□□□ -1.87
DNMT1-222ENST00000590619 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
DNMT1-222ENST00000590619 IGKV2-28A0A075B6P5 120 aa3.38□□□□□ -1.87
DNMT1-222ENST00000590619 RAB19A4D1S5 217 aa3.38□□□□□ -1.87
DNMT1-222ENST00000590619 MAP1LC3B2A6NCE7 125 aa3.38□□□□□ -1.87
DNMT1-222ENST00000590619 C9orf92A6NGG3 77 aa3.38□□□□□ -1.87
DNMT1-222ENST00000590619 UMAD1C9J7I0 102 aa3.38□□□□□ -1.87
DNMT1-222ENST00000590619 SCO1O75880 301 aa3.38□□□□□ -1.87
DNMT1-222ENST00000590619 IGKV2D-28P01615 120 aa3.38□□□□□ -1.87
DNMT1-222ENST00000590619 MT1FP04733 61 aa3.38□□□□□ -1.87
DNMT1-222ENST00000590619 RPL35P42766 123 aaKnown RBP3.38□□□□□ -1.87
DNMT1-222ENST00000590619 SMAGPQ0VAQ4 97 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms