RNA–Protein interactions for RNA: ENST00000590588.5

ZNF540-209, Transcript of zinc finger protein 540, humanhuman

TSL 3

Gene ZNF540, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-209ENST00000590588 ODF1Q14990 250 aa7.05□□□□□ -1.28
ZNF540-209ENST00000590588 SLC25A34Q6PIV7 304 aa7.05□□□□□ -1.28
ZNF540-209ENST00000590588 RHODO00212 210 aa7.04□□□□□ -1.28
ZNF540-209ENST00000590588 NCR2O95944 276 aa7.04□□□□□ -1.28
ZNF540-209ENST00000590588 SSTP61278 116 aa7.04□□□□□ -1.28
ZNF540-209ENST00000590588 COL5A1-AS1Q5SY13 56 aa7.04□□□□□ -1.28
ZNF540-209ENST00000590588 Q6ZN92 141 aa7.04□□□□□ -1.28
ZNF540-209ENST00000590588 LINC00469Q8N7U9 141 aa7.04□□□□□ -1.28
ZNF540-209ENST00000590588 SNHG12Q9BXW3 62 aa7.04□□□□□ -1.28
ZNF540-209ENST00000590588 TRBV27A0A0K0K1C4 114 aa7.03□□□□□ -1.28
ZNF540-209ENST00000590588 LOC389332A0A1B0GUA5 103 aa7.03□□□□□ -1.28
ZNF540-209ENST00000590588 A8MWV9 139 aa7.03□□□□□ -1.28
ZNF540-209ENST00000590588 COX8AP10176 69 aa7.03□□□□□ -1.28
ZNF540-209ENST00000590588 PLNP26678 52 aa7.03□□□□□ -1.28
ZNF540-209ENST00000590588 PAPPA-AS1Q5QFB9 102 aa7.03□□□□□ -1.28
ZNF540-209ENST00000590588 TOMM6Q96B49 74 aa7.03□□□□□ -1.28
ZNF540-209ENST00000590588 SMKR1H3BMG3 65 aa7.02□□□□□ -1.29
ZNF540-209ENST00000590588 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-209ENST00000590588 VCYO14598 125 aa7.02□□□□□ -1.29
ZNF540-209ENST00000590588 GHRHP01286 108 aa7.02□□□□□ -1.29
ZNF540-209ENST00000590588 POLR2KP53803 58 aaKnown RBP7.02□□□□□ -1.29
ZNF540-209ENST00000590588 DGAT2L7PQ6IED9 249 aa7.02□□□□□ -1.29
ZNF540-209ENST00000590588 LINC00173Q6ZV60 143 aa7.02□□□□□ -1.29
ZNF540-209ENST00000590588 KIR2DL4Q99706 377 aa7.02□□□□□ -1.29
ZNF540-209ENST00000590588 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-209ENST00000590588 MUC2Q02817 5179 aa7.02□□□□□ -1.29
ZNF540-209ENST00000590588 MUC21A0A0G2JKD1 596 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 A0A0U1RQV1 116 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 MUC21A0A140T8X8 626 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 GNRH2O43555 120 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 DPM2O94777 84 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 ERASQ7Z444 233 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 BOD1L2Q8IYS8 172 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 C14orf178Q8N769 122 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-209ENST00000590588 C9orf163Q8N9P6 203 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 UBE2WQ96B02 151 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 TMEM141Q96I45 108 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 DNAJC30Q96LL9 226 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 TIMM17AQ99595 171 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 KLK12Q9UKR0 248 aa7.01□□□□□ -1.29
ZNF540-209ENST00000590588 A0A087WX48 190 aa7□□□□□ -1.29
ZNF540-209ENST00000590588 A0A0J9YXV3 536 aa7□□□□□ -1.29
ZNF540-209ENST00000590588 KRTAP10-8P60410 259 aa7□□□□□ -1.29
ZNF540-209ENST00000590588 ZFP2Q6ZN57 461 aa7□□□□□ -1.29
ZNF540-209ENST00000590588 CYSLTR1Q9Y271 337 aa7□□□□□ -1.29
ZNF540-209ENST00000590588 IGHV3-73A0A0B4J1V6 119 aa6.99□□□□□ -1.29
ZNF540-209ENST00000590588 F8VRH5 84 aa6.99□□□□□ -1.29
ZNF540-209ENST00000590588 PANO1I0J062 215 aa6.99□□□□□ -1.29
ZNF540-209ENST00000590588 IGKCP01834 107 aa6.99□□□□□ -1.29
ZNF540-209ENST00000590588 CFAP126Q5VTH2 177 aa6.99□□□□□ -1.29
ZNF540-209ENST00000590588 SDIM1Q6ZPB5 146 aa6.99□□□□□ -1.29
ZNF540-209ENST00000590588 DPH3Q96FX2 82 aa6.99□□□□□ -1.29
ZNF540-209ENST00000590588 HIGD1BQ9P298 99 aa6.99□□□□□ -1.29
ZNF540-209ENST00000590588 FAT4Q6V0I7 4981 aa6.99□□□□□ -1.29
ZNF540-209ENST00000590588 M0QY20 66 aa6.98□□□□□ -1.29
ZNF540-209ENST00000590588 PRSS1P07477 247 aa6.98□□□□□ -1.29
ZNF540-209ENST00000590588 MGPP08493 103 aa6.98□□□□□ -1.29
ZNF540-209ENST00000590588 SEC11AP67812 179 aa6.98□□□□□ -1.29
ZNF540-209ENST00000590588 GAGE1Q13065 139 aa6.98□□□□□ -1.29
ZNF540-209ENST00000590588 ZNF876PQ49A33 203 aa6.98□□□□□ -1.29
ZNF540-209ENST00000590588 SUMO4Q6EEV6 95 aa6.98□□□□□ -1.29
ZNF540-209ENST00000590588 ATOH7Q8N100 152 aa6.98□□□□□ -1.29
ZNF540-209ENST00000590588 TRAV26-2A0A0B4J265 109 aa6.97□□□□□ -1.29
ZNF540-209ENST00000590588 GAGE12JA6NER3 117 aa6.97□□□□□ -1.29
ZNF540-209ENST00000590588 SDHAF1A6NFY7 115 aa6.97□□□□□ -1.29
ZNF540-209ENST00000590588 GAGE4Q13068 117 aa6.97□□□□□ -1.29
ZNF540-209ENST00000590588 GAGE5Q13069 117 aa6.97□□□□□ -1.29
ZNF540-209ENST00000590588 GAGE13Q4V321 117 aa6.97□□□□□ -1.29
ZNF540-209ENST00000590588 C2orf66Q6UXQ4 117 aa6.97□□□□□ -1.29
ZNF540-209ENST00000590588 C1orf43Q9BWL3 253 aa6.97□□□□□ -1.29
ZNF540-209ENST00000590588 hDV102S1A0JD36 115 aa6.96□□□□□ -1.3
ZNF540-209ENST00000590588 USP17L23D6RBM5 183 aa6.96□□□□□ -1.3
ZNF540-209ENST00000590588 FGF6P10767 208 aa6.96□□□□□ -1.3
ZNF540-209ENST00000590588 CIRBPQ14011 172 aaKnown RBP6.96□□□□□ -1.3
ZNF540-209ENST00000590588 TAL2Q16559 108 aa6.96□□□□□ -1.3
ZNF540-209ENST00000590588 UFSP1Q6NVU6 142 aa6.96□□□□□ -1.3
ZNF540-209ENST00000590588 NEXN-AS1Q8NBZ9 246 aa6.96□□□□□ -1.3
ZNF540-209ENST00000590588 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
ZNF540-209ENST00000590588 CHCHD7Q9BUK0 85 aa6.96□□□□□ -1.3
ZNF540-209ENST00000590588 PYGO1Q9Y3Y4 419 aa6.96□□□□□ -1.3
ZNF540-209ENST00000590588 TRBV10-1A0A0K0K1A3 114 aa6.95□□□□□ -1.3
ZNF540-209ENST00000590588 I3L3M4 83 aa6.95□□□□□ -1.3
ZNF540-209ENST00000590588 LINC00694P0DN24 101 aa6.95□□□□□ -1.3
ZNF540-209ENST00000590588 HSD52Q0P140 79 aa6.95□□□□□ -1.3
ZNF540-209ENST00000590588 SMAGPQ0VAQ4 97 aa6.95□□□□□ -1.3
ZNF540-209ENST00000590588 ZNF56Q15929 161 aa6.95□□□□□ -1.3
ZNF540-209ENST00000590588 MAJINQ3KP22 176 aa6.95□□□□□ -1.3
ZNF540-209ENST00000590588 REG3GQ6UW15 175 aa6.95□□□□□ -1.3
ZNF540-209ENST00000590588 C7orf33Q8WU49 177 aa6.95□□□□□ -1.3
ZNF540-209ENST00000590588 RPL39LQ96EH5 51 aaKnown RBP6.95□□□□□ -1.3
ZNF540-209ENST00000590588 A0A087WYN8 130 aa6.94□□□□□ -1.3
ZNF540-209ENST00000590588 IGIPA6NJ69 53 aa6.94□□□□□ -1.3
ZNF540-209ENST00000590588 F5H697 171 aa6.94□□□□□ -1.3
ZNF540-209ENST00000590588 TMEM97Q5BJF2 176 aa6.94□□□□□ -1.3
ZNF540-209ENST00000590588 ORAOV1Q8WV07 137 aa6.94□□□□□ -1.3
ZNF540-209ENST00000590588 A0A1B0GV90 55 aa6.93□□□□□ -1.3
ZNF540-209ENST00000590588 H0Y8G0 127 aa6.93□□□□□ -1.3
ZNF540-209ENST00000590588 HERVK_113P61574 105 aa6.93□□□□□ -1.3
ZNF540-209ENST00000590588 PMVKQ15126 192 aa6.93□□□□□ -1.3
ZNF540-209ENST00000590588 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms