RNA–Protein interactions for RNA: ENST00000590011.1

CELF4-215, Transcript of CUGBP Elav-like family member 4, human

TSL 2

Gene CELF4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-215	ENST00000590011	LINC00242	Q5T6M2	205 aa		12.12	□□□□□ -0.47
CELF4-215	ENST00000590011	C5orf38	Q86SI9	138 aa		12.12	□□□□□ -0.47
CELF4-215	ENST00000590011	C2orf88	Q9BSF0	95 aa		12.12	□□□□□ -0.47
CELF4-215	ENST00000590011	IGHV3OR16-9	A0A0B4J2B5	98 aa		12.11	□□□□□ -0.47
CELF4-215	ENST00000590011	IGHV1-58	A0A0C4DH39	117 aa		12.11	□□□□□ -0.47
CELF4-215	ENST00000590011	ATP6V1G1	O75348	118 aa		12.11	□□□□□ -0.47
CELF4-215	ENST00000590011	LINC01549	A6NIU2	74 aa		12.1	□□□□□ -0.47
CELF4-215	ENST00000590011	HBD	P02042	147 aa		12.1	□□□□□ -0.47
CELF4-215	ENST00000590011	CNBP	P62633	177 aa	Known RBP	12.1	□□□□□ -0.47
CELF4-215	ENST00000590011	COX6A2	Q02221	97 aa		12.1	□□□□□ -0.47
CELF4-215	ENST00000590011	PAPPA-AS1	Q5QFB9	102 aa		12.1	□□□□□ -0.47
CELF4-215	ENST00000590011	CDK2AP2	O75956	126 aa		12.09	□□□□□ -0.47
CELF4-215	ENST00000590011	PDZD11	Q5EBL8	140 aa		12.09	□□□□□ -0.47
CELF4-215	ENST00000590011	CHCHD1	Q96BP2	118 aa	Known RBP	12.09	□□□□□ -0.47
CELF4-215	ENST00000590011	LINC00526	Q96FQ7	95 aa		12.09	□□□□□ -0.47
CELF4-215	ENST00000590011	KRTAP3-3	Q9BYR6	98 aa		12.09	□□□□□ -0.47
CELF4-215	ENST00000590011	KRTAP3-2	Q9BYR7	98 aa		12.09	□□□□□ -0.47
CELF4-215	ENST00000590011	MAL	P21145	153 aa		12.08	□□□□□ -0.48
CELF4-215	ENST00000590011	LINC00310	P59036	64 aa		12.08	□□□□□ -0.48
CELF4-215	ENST00000590011	FAM30A	Q9NZY2	134 aa		12.08	□□□□□ -0.48
CELF4-215	ENST00000590011	HSPG2	P98160	4391 aa		12.07	□□□□□ -0.48
CELF4-215	ENST00000590011	S100A1	P23297	94 aa		12.07	□□□□□ -0.48
CELF4-215	ENST00000590011	FAM19A3	Q7Z5A8	133 aa		12.07	□□□□□ -0.48
CELF4-215	ENST00000590011	BAGE3	Q86Y29	109 aa		12.07	□□□□□ -0.48
CELF4-215	ENST00000590011	C9orf163	Q8N9P6	203 aa		12.07	□□□□□ -0.48
CELF4-215	ENST00000590011	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	12.05	□□□□□ -0.48
CELF4-215	ENST00000590011	XG	P55808	180 aa		12.05	□□□□□ -0.48
CELF4-215	ENST00000590011		Q6ZSA8	131 aa		12.05	□□□□□ -0.48
CELF4-215	ENST00000590011	CST9L	Q9H4G1	147 aa		12.05	□□□□□ -0.48
CELF4-215	ENST00000590011		A0A087WZ39	114 aa		12.04	□□□□□ -0.48
CELF4-215	ENST00000590011		A0A0J9YXV3	536 aa		12.04	□□□□□ -0.48
CELF4-215	ENST00000590011	SERF1A	O75920	110 aa		12.04	□□□□□ -0.48
CELF4-215	ENST00000590011	HAMP	P81172	84 aa		12.04	□□□□□ -0.48
CELF4-215	ENST00000590011	PMVK	Q15126	192 aa		12.04	□□□□□ -0.48
CELF4-215	ENST00000590011	IGLV4-69	A0A075B6H9	119 aa		12.03	□□□□□ -0.48
CELF4-215	ENST00000590011	IGHV3-64	A0A075B6Q5	118 aa		12.03	□□□□□ -0.48
CELF4-215	ENST00000590011	APOM	O95445	188 aa		12.03	□□□□□ -0.48
CELF4-215	ENST00000590011	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	12.02	□□□□□ -0.49
CELF4-215	ENST00000590011	ZNF561-AS1	K7EIQ3	104 aa		12.02	□□□□□ -0.49
CELF4-215	ENST00000590011	NUPR1	O60356	82 aa		12.02	□□□□□ -0.49
CELF4-215	ENST00000590011	HSBP1	O75506	76 aa		12.02	□□□□□ -0.49
CELF4-215	ENST00000590011	SPAG11B	Q08648	103 aa		12.02	□□□□□ -0.49
CELF4-215	ENST00000590011	FAM19A2	Q8N3H0	131 aa		12.02	□□□□□ -0.49
CELF4-215	ENST00000590011	ORAOV1	Q8WV07	137 aa		12.02	□□□□□ -0.49
CELF4-215	ENST00000590011	KRTAP17-1	Q9BYP8	105 aa		12.02	□□□□□ -0.49
CELF4-215	ENST00000590011	ATP5L	O75964	103 aa		12.01	□□□□□ -0.49
CELF4-215	ENST00000590011	SDIM1	Q6ZPB5	146 aa		12.01	□□□□□ -0.49
CELF4-215	ENST00000590011	OR10D4P	Q8NGN7	298 aa		12.01	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST1H2BK	O60814	126 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST1H2BJ	P06899	126 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST1H2BO	P23527	126 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST1H2BB	P33778	126 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST1H2BD	P58876	126 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST1H2BC	P62807	126 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	HERVK_113	P63121	156 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	SEC11A	P67812	179 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST2H2BE	Q16778	126 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST1H2BH	Q93079	126 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST1H2BN	Q99877	126 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	HIST1H2BM	Q99879	126 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	CDKN2A-AS1	Q9UH64	79 aa		12	□□□□□ -0.49
CELF4-215	ENST00000590011	TINCR	A0A1B0GVN0	87 aa		11.99	□□□□□ -0.49
CELF4-215	ENST00000590011	LINC01561	Q8N1V8	128 aa		11.99	□□□□□ -0.49
CELF4-215	ENST00000590011	CARD19	Q96LW7	228 aa		11.99	□□□□□ -0.49
CELF4-215	ENST00000590011	GEMIN7	Q9H840	131 aa	Known RBP	11.99	□□□□□ -0.49
CELF4-215	ENST00000590011	PANO1	I0J062	215 aa		11.98	□□□□□ -0.49
CELF4-215	ENST00000590011	NDUFA6	P56556	154 aa		11.98	□□□□□ -0.49
CELF4-215	ENST00000590011	SYCN	Q0VAF6	134 aa		11.98	□□□□□ -0.49
CELF4-215	ENST00000590011		Q6ZRU5	148 aa		11.98	□□□□□ -0.49
CELF4-215	ENST00000590011	C2orf48	Q96LS8	159 aa		11.98	□□□□□ -0.49
CELF4-215	ENST00000590011	IGLV5-45	A0A087WSX0	123 aa		11.97	□□□□□ -0.49
CELF4-215	ENST00000590011	KIAA0087	Q14695	138 aa		11.97	□□□□□ -0.49
CELF4-215	ENST00000590011	LINC00469	Q8N7U9	141 aa		11.97	□□□□□ -0.49
CELF4-215	ENST00000590011	CAMK2N2	Q96S95	79 aa		11.97	□□□□□ -0.49
CELF4-215	ENST00000590011	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.97	□□□□□ -0.49
CELF4-215	ENST00000590011	IGLC3	P0DOY3	106 aa		11.96	□□□□□ -0.49
CELF4-215	ENST00000590011	IFI27L1	Q96BM0	104 aa		11.96	□□□□□ -0.49
CELF4-215	ENST00000590011	SCX	Q7RTU7	201 aa		11.95	□□□□□ -0.5
CELF4-215	ENST00000590011	CHTF8	P0CG12	524 aa		11.94	□□□□□ -0.5
CELF4-215	ENST00000590011	C10orf25	Q5T742	122 aa		11.94	□□□□□ -0.5
CELF4-215	ENST00000590011	CHAC1	Q9BUX1	264 aa		11.94	□□□□□ -0.5
CELF4-215	ENST00000590011	SMIM1	B2RUZ4	78 aa		11.93	□□□□□ -0.5
CELF4-215	ENST00000590011	LEPROTL1	O95214	131 aa		11.92	□□□□□ -0.5
CELF4-215	ENST00000590011	CIRBP	Q14011	172 aa	Known RBP	11.92	□□□□□ -0.5
CELF4-215	ENST00000590011	CIRBP-AS1	Q8TBR5	109 aa		11.92	□□□□□ -0.5
CELF4-215	ENST00000590011	PACRG	Q96M98	296 aa	Predicted RBP	11.92	□□□□□ -0.5
CELF4-215	ENST00000590011	TRAV12-1	A0A0B4J245	112 aa		11.91	□□□□□ -0.5
CELF4-215	ENST00000590011		F8WDY8	70 aa		11.91	□□□□□ -0.5
CELF4-215	ENST00000590011	NDUFA1	O15239	70 aa		11.91	□□□□□ -0.5
CELF4-215	ENST00000590011	ZNF22	P17026	224 aa	Predicted RBP	11.91	□□□□□ -0.5
CELF4-215	ENST00000590011	C2orf82	Q6UX34	121 aa		11.91	□□□□□ -0.5
CELF4-215	ENST00000590011	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.91	□□□□□ -0.5
CELF4-215	ENST00000590011	TOMM7	Q9P0U1	55 aa		11.91	□□□□□ -0.5
CELF4-215	ENST00000590011	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.91	□□□□□ -0.5
CELF4-215	ENST00000590011	PCLO	Q9Y6V0	5065 aa		11.9	□□□□□ -0.5
CELF4-215	ENST00000590011		A0A096LNI7	61 aa		11.9	□□□□□ -0.5
CELF4-215	ENST00000590011	C11orf86	A6NJI1	115 aa		11.9	□□□□□ -0.5
CELF4-215	ENST00000590011	SMR3B	P02814	79 aa	Predicted RBP	11.9	□□□□□ -0.5
CELF4-215	ENST00000590011	SPINK8	P0C7L1	97 aa		11.9	□□□□□ -0.5

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