RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 GAGE12HA6NDE8 117 aa11.31□□□□□ -0.6
SCAMP4-211ENST00000588907 SYS1-DBNDD2H3BUS1 97 aa11.31□□□□□ -0.6
SCAMP4-211ENST00000588907 IGLC3P0DOY3 106 aa11.31□□□□□ -0.6
SCAMP4-211ENST00000588907 Q6ZRN7 208 aaPredicted RBP11.31□□□□□ -0.6
SCAMP4-211ENST00000588907 RYR2Q92736 4967 aa11.31□□□□□ -0.6
SCAMP4-211ENST00000588907 H0Y8G0 127 aa11.3□□□□□ -0.6
SCAMP4-211ENST00000588907 COX7A2LO14548 114 aa11.3□□□□□ -0.6
SCAMP4-211ENST00000588907 PLNP26678 52 aa11.3□□□□□ -0.6
SCAMP4-211ENST00000588907 FOXI1Q12951 378 aa11.3□□□□□ -0.6
SCAMP4-211ENST00000588907 ODF1Q14990 250 aa11.3□□□□□ -0.6
SCAMP4-211ENST00000588907 KRTAP26-1Q6PEX3 210 aa11.3□□□□□ -0.6
SCAMP4-211ENST00000588907 LINC01561Q8N1V8 128 aa11.3□□□□□ -0.6
SCAMP4-211ENST00000588907 IGHV3OR16-9A0A0B4J2B5 98 aa11.29□□□□□ -0.6
SCAMP4-211ENST00000588907 H3BRM9 83 aa11.29□□□□□ -0.6
SCAMP4-211ENST00000588907 KRTDAPP60985 99 aa11.29□□□□□ -0.6
SCAMP4-211ENST00000588907 CFAP161Q6P656 301 aa11.29□□□□□ -0.6
SCAMP4-211ENST00000588907 CHAC1Q9BUX1 264 aa11.29□□□□□ -0.6
SCAMP4-211ENST00000588907 FRAS1Q86XX4 4008 aa11.28□□□□□ -0.6
SCAMP4-211ENST00000588907 IGLV5-45A0A087WSX0 123 aa11.28□□□□□ -0.6
SCAMP4-211ENST00000588907 A0A0J9YXV3 536 aa11.28□□□□□ -0.6
SCAMP4-211ENST00000588907 APOMO95445 188 aa11.28□□□□□ -0.6
SCAMP4-211ENST00000588907 C3orf79P0CE67 100 aa11.28□□□□□ -0.6
SCAMP4-211ENST00000588907 MRPL35Q9NZE8 188 aaKnown RBP11.28□□□□□ -0.6
SCAMP4-211ENST00000588907 DNAH10Q8IVF4 4471 aa11.27□□□□□ -0.6
SCAMP4-211ENST00000588907 IGLV4-69A0A075B6H9 119 aa11.27□□□□□ -0.61
SCAMP4-211ENST00000588907 A0A087WZ39 114 aa11.27□□□□□ -0.61
SCAMP4-211ENST00000588907 MALP21145 153 aa11.27□□□□□ -0.61
SCAMP4-211ENST00000588907 C14orf177Q52M58 125 aa11.27□□□□□ -0.61
SCAMP4-211ENST00000588907 LINC00336Q6ZUF6 198 aa11.27□□□□□ -0.61
SCAMP4-211ENST00000588907 LINC00469Q8N7U9 141 aa11.27□□□□□ -0.61
SCAMP4-211ENST00000588907 DPM2O94777 84 aa11.26□□□□□ -0.61
SCAMP4-211ENST00000588907 LINC01545Q5VT33 79 aa11.26□□□□□ -0.61
SCAMP4-211ENST00000588907 DNAH17Q9UFH2 4485 aa11.25□□□□□ -0.61
SCAMP4-211ENST00000588907 IGHV1-58A0A0C4DH39 117 aa11.25□□□□□ -0.61
SCAMP4-211ENST00000588907 EREGO14944 169 aa11.25□□□□□ -0.61
SCAMP4-211ENST00000588907 IGKCP01834 107 aa11.24□□□□□ -0.61
SCAMP4-211ENST00000588907 COX6A2Q02221 97 aa11.24□□□□□ -0.61
SCAMP4-211ENST00000588907 CDKN2A-AS1Q9UH64 79 aa11.24□□□□□ -0.61
SCAMP4-211ENST00000588907 C11orf86A6NJI1 115 aa11.23□□□□□ -0.61
SCAMP4-211ENST00000588907 RTL8CO15255 209 aa11.23□□□□□ -0.61
SCAMP4-211ENST00000588907 TMEM170BQ5T4T1 132 aa11.23□□□□□ -0.61
SCAMP4-211ENST00000588907 C5orf38Q86SI9 138 aa11.23□□□□□ -0.61
SCAMP4-211ENST00000588907 OR10D4PQ8NGN7 298 aa11.23□□□□□ -0.61
SCAMP4-211ENST00000588907 ZNF22P17026 224 aaPredicted RBP11.22□□□□□ -0.61
SCAMP4-211ENST00000588907 MAPKAPK5-AS1Q8N8E1 139 aa11.22□□□□□ -0.61
SCAMP4-211ENST00000588907 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.61
SCAMP4-211ENST00000588907 USP17L23D6RBM5 183 aa11.21□□□□□ -0.61
SCAMP4-211ENST00000588907 A0A087WTM6 91 aa11.2□□□□□ -0.62
SCAMP4-211ENST00000588907 GVQW2A0A096LPI5 108 aaPredicted RBP11.2□□□□□ -0.62
SCAMP4-211ENST00000588907 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
SCAMP4-211ENST00000588907 HERVK_113P61574 105 aa11.2□□□□□ -0.62
SCAMP4-211ENST00000588907 F8WDY8 70 aa11.19□□□□□ -0.62
SCAMP4-211ENST00000588907 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
SCAMP4-211ENST00000588907 PMCHL2Q9BQD1 86 aa11.19□□□□□ -0.62
SCAMP4-211ENST00000588907 FAT2Q9NYQ8 4349 aa11.18□□□□□ -0.62
SCAMP4-211ENST00000588907 SMIM1B2RUZ4 78 aa11.18□□□□□ -0.62
SCAMP4-211ENST00000588907 ZNF561-AS1K7EIQ3 104 aa11.18□□□□□ -0.62
SCAMP4-211ENST00000588907 ORAOV1Q8WV07 137 aa11.18□□□□□ -0.62
SCAMP4-211ENST00000588907 TMEM223A0PJW6 202 aa11.17□□□□□ -0.62
SCAMP4-211ENST00000588907 PRSS2P07478 247 aa11.17□□□□□ -0.62
SCAMP4-211ENST00000588907 Q8IZM0 81 aa11.17□□□□□ -0.62
SCAMP4-211ENST00000588907 IGLV5-39A0A0G2JS06 123 aa11.16□□□□□ -0.62
SCAMP4-211ENST00000588907 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
SCAMP4-211ENST00000588907 SPINK8P0C7L1 97 aa11.16□□□□□ -0.62
SCAMP4-211ENST00000588907 TNP2Q05952 138 aa11.16□□□□□ -0.62
SCAMP4-211ENST00000588907 SPAG11BQ08648 103 aa11.16□□□□□ -0.62
SCAMP4-211ENST00000588907 SFTA2Q6UW10 78 aa11.16□□□□□ -0.62
SCAMP4-211ENST00000588907 Q8N814 137 aa11.16□□□□□ -0.62
SCAMP4-211ENST00000588907 RYR3Q15413 4870 aa11.15□□□□□ -0.62
SCAMP4-211ENST00000588907 LECT2O14960 151 aa11.15□□□□□ -0.62
SCAMP4-211ENST00000588907 SCGB1D1O95968 90 aa11.15□□□□□ -0.62
SCAMP4-211ENST00000588907 CXCL5P42830 114 aa11.15□□□□□ -0.62
SCAMP4-211ENST00000588907 NTN5Q8WTR8 489 aaPredicted RBP11.15□□□□□ -0.62
SCAMP4-211ENST00000588907 C2orf48Q96LS8 159 aa11.15□□□□□ -0.62
SCAMP4-211ENST00000588907 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.13□□□□□ -0.63
SCAMP4-211ENST00000588907 WFDC2Q14508 124 aa11.13□□□□□ -0.63
SCAMP4-211ENST00000588907 JOSD1Q15040 202 aaPredicted RBP11.13□□□□□ -0.63
SCAMP4-211ENST00000588907 HIGD2BQ4VC39 106 aa11.13□□□□□ -0.63
SCAMP4-211ENST00000588907 C6orf226Q5I0X4 101 aa11.13□□□□□ -0.63
SCAMP4-211ENST00000588907 COX7B2Q8TF08 81 aa11.13□□□□□ -0.63
SCAMP4-211ENST00000588907 PLEKHB2Q96CS7 222 aa11.13□□□□□ -0.63
SCAMP4-211ENST00000588907 HSBP1L1C9JCN9 74 aa11.12□□□□□ -0.63
SCAMP4-211ENST00000588907 CKS1BP61024 79 aa11.12□□□□□ -0.63
SCAMP4-211ENST00000588907 CNBPP62633 177 aaKnown RBP11.12□□□□□ -0.63
SCAMP4-211ENST00000588907 TOMM7Q9P0U1 55 aa11.12□□□□□ -0.63
SCAMP4-211ENST00000588907 E9PLD3 99 aa11.11□□□□□ -0.63
SCAMP4-211ENST00000588907 NDUFA1O15239 70 aa11.11□□□□□ -0.63
SCAMP4-211ENST00000588907 CDPF1Q6NVV7 123 aa11.11□□□□□ -0.63
SCAMP4-211ENST00000588907 PKIGQ9Y2B9 76 aa11.11□□□□□ -0.63
SCAMP4-211ENST00000588907 LEPROTO15243 131 aa11.1□□□□□ -0.63
SCAMP4-211ENST00000588907 KIAA0087Q14695 138 aa11.1□□□□□ -0.63
SCAMP4-211ENST00000588907 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
SCAMP4-211ENST00000588907 PGPEP1Q9NXJ5 209 aa11.09□□□□□ -0.63
SCAMP4-211ENST00000588907 NMUP48645 174 aa11.08□□□□□ -0.64
SCAMP4-211ENST00000588907 SYCNQ0VAF6 134 aa11.08□□□□□ -0.64
SCAMP4-211ENST00000588907 ATOH7Q8N100 152 aa11.08□□□□□ -0.64
SCAMP4-211ENST00000588907 CARD19Q96LW7 228 aa11.08□□□□□ -0.64
SCAMP4-211ENST00000588907 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.07□□□□□ -0.64
SCAMP4-211ENST00000588907 TRBV30A0A0K0K1B3 111 aa11.07□□□□□ -0.64
SCAMP4-211ENST00000588907 LGALS3P17931 250 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms