RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 RPL35AP18077 110 aaKnown RBP10.4□□□□□ -0.75
CCDC43-203ENST00000588210 MIAQ16674 131 aa10.4□□□□□ -0.75
CCDC43-203ENST00000588210 Q1RN00 199 aa10.4□□□□□ -0.75
CCDC43-203ENST00000588210 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
CCDC43-203ENST00000588210 C9JAW5 83 aa10.39□□□□□ -0.75
CCDC43-203ENST00000588210 H7C2G1 150 aa10.39□□□□□ -0.75
CCDC43-203ENST00000588210 SPINK8P0C7L1 97 aa10.39□□□□□ -0.75
CCDC43-203ENST00000588210 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
CCDC43-203ENST00000588210 LINC01600Q96MT4 127 aa10.39□□□□□ -0.75
CCDC43-203ENST00000588210 HUWE1Q7Z6Z7 4374 aaKnown RBP10.39□□□□□ -0.75
CCDC43-203ENST00000588210 TIMM17BO60830 172 aa10.38□□□□□ -0.75
CCDC43-203ENST00000588210 TIRAPP58753 221 aa10.38□□□□□ -0.75
CCDC43-203ENST00000588210 ADAMTSL4-AS1Q5T5F5 129 aa10.38□□□□□ -0.75
CCDC43-203ENST00000588210 IL17DQ8TAD2 202 aa10.38□□□□□ -0.75
CCDC43-203ENST00000588210 RNF183Q96D59 192 aa10.38□□□□□ -0.75
CCDC43-203ENST00000588210 GEMIN7Q9H840 131 aaKnown RBP10.38□□□□□ -0.75
CCDC43-203ENST00000588210 IGHV3-38A0A0C4DH36 116 aa10.38□□□□□ -0.75
CCDC43-203ENST00000588210 TRIAP1O43715 76 aa10.37□□□□□ -0.75
CCDC43-203ENST00000588210 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
CCDC43-203ENST00000588210 PRSS2P07478 247 aa10.36□□□□□ -0.75
CCDC43-203ENST00000588210 A0A1B0GV72 72 aa10.35□□□□□ -0.75
CCDC43-203ENST00000588210 NDUFA1O15239 70 aa10.35□□□□□ -0.75
CCDC43-203ENST00000588210 CDKN2A-AS1Q9UH64 79 aa10.35□□□□□ -0.75
CCDC43-203ENST00000588210 IFITM1P13164 125 aa10.35□□□□□ -0.75
CCDC43-203ENST00000588210 XGP55808 180 aa10.35□□□□□ -0.75
CCDC43-203ENST00000588210 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
CCDC43-203ENST00000588210 ICOSQ9Y6W8 199 aa10.35□□□□□ -0.75
CCDC43-203ENST00000588210 TMEM262E9PQX1 116 aa10.34□□□□□ -0.75
CCDC43-203ENST00000588210 TGP01266 2768 aa10.34□□□□□ -0.75
CCDC43-203ENST00000588210 FAM19A3Q7Z5A8 133 aa10.34□□□□□ -0.75
CCDC43-203ENST00000588210 C1orf158Q8N1D5 194 aa10.34□□□□□ -0.75
CCDC43-203ENST00000588210 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
CCDC43-203ENST00000588210 MT-ATP8P03928 68 aa10.34□□□□□ -0.75
CCDC43-203ENST00000588210 TRBV10-2A0A0K0K1G8 114 aa10.33□□□□□ -0.76
CCDC43-203ENST00000588210 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
CCDC43-203ENST00000588210 DGAT2L7PQ6IED9 249 aa10.33□□□□□ -0.76
CCDC43-203ENST00000588210 TMEM101Q96IK0 257 aa10.33□□□□□ -0.76
CCDC43-203ENST00000588210 IGHV3OR16-12A0A075B7B8 117 aa10.32□□□□□ -0.76
CCDC43-203ENST00000588210 IGLV5-39A0A0G2JS06 123 aa10.32□□□□□ -0.76
CCDC43-203ENST00000588210 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
CCDC43-203ENST00000588210 HERVK_113P63121 156 aa10.32□□□□□ -0.76
CCDC43-203ENST00000588210 OVOL2Q9BRP0 275 aa10.32□□□□□ -0.76
CCDC43-203ENST00000588210 RETNQ9HD89 108 aa10.32□□□□□ -0.76
CCDC43-203ENST00000588210 TRGV1A0A0A0MS02 117 aa10.32□□□□□ -0.76
CCDC43-203ENST00000588210 CIDEAO60543 219 aa10.32□□□□□ -0.76
CCDC43-203ENST00000588210 RPL13AP40429 203 aaKnown RBP10.32□□□□□ -0.76
CCDC43-203ENST00000588210 K7EQD1 137 aa10.31□□□□□ -0.76
CCDC43-203ENST00000588210 GIG44P09565 113 aaPredicted RBP10.31□□□□□ -0.76
CCDC43-203ENST00000588210 CSDC2Q9Y534 153 aaKnown RBP10.31□□□□□ -0.76
CCDC43-203ENST00000588210 COX6CP09669 75 aa10.3□□□□□ -0.76
CCDC43-203ENST00000588210 NPC2P61916 151 aa10.3□□□□□ -0.76
CCDC43-203ENST00000588210 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
CCDC43-203ENST00000588210 COX6A2Q02221 97 aa10.3□□□□□ -0.76
CCDC43-203ENST00000588210 LINC00242Q5T6M2 205 aa10.3□□□□□ -0.76
CCDC43-203ENST00000588210 NTN5Q8WTR8 489 aaPredicted RBP10.3□□□□□ -0.76
CCDC43-203ENST00000588210 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
CCDC43-203ENST00000588210 CKS1BP61024 79 aa10.3□□□□□ -0.76
CCDC43-203ENST00000588210 DAZ2Q13117 558 aaKnown RBP10.3□□□□□ -0.76
CCDC43-203ENST00000588210 DAZ4Q86SG3 579 aaKnown RBP10.3□□□□□ -0.76
CCDC43-203ENST00000588210 DAZ3Q9NR90 486 aaKnown RBP10.3□□□□□ -0.76
CCDC43-203ENST00000588210 TRAV4A0A0B4J268 109 aa10.29□□□□□ -0.76
CCDC43-203ENST00000588210 CIRBPQ14011 172 aaKnown RBP10.29□□□□□ -0.76
CCDC43-203ENST00000588210 H3BT86 120 aa10.29□□□□□ -0.76
CCDC43-203ENST00000588210 LINC00694P0DN24 101 aa10.29□□□□□ -0.76
CCDC43-203ENST00000588210 CSNK1G2-AS1Q8NCQ2 148 aa10.29□□□□□ -0.76
CCDC43-203ENST00000588210 Q6ZTI0 123 aa10.28□□□□□ -0.76
CCDC43-203ENST00000588210 SMIM1B2RUZ4 78 aa10.27□□□□□ -0.76
CCDC43-203ENST00000588210 LST1O00453 97 aa10.27□□□□□ -0.76
CCDC43-203ENST00000588210 NTM-AS1Q6ZSK4 140 aa10.27□□□□□ -0.76
CCDC43-203ENST00000588210 Q9H8V8 135 aa10.27□□□□□ -0.76
CCDC43-203ENST00000588210 NBEAL2Q6ZNJ1 2754 aa10.27□□□□□ -0.77
CCDC43-203ENST00000588210 DAND5Q8N907 189 aa10.27□□□□□ -0.77
CCDC43-203ENST00000588210 LINC00308Q8TCZ7 52 aa10.27□□□□□ -0.77
CCDC43-203ENST00000588210 UBE2WQ96B02 151 aa10.27□□□□□ -0.77
CCDC43-203ENST00000588210 WWC2-AS2Q96NR7 200 aa10.27□□□□□ -0.77
CCDC43-203ENST00000588210 H7C423 109 aa10.26□□□□□ -0.77
CCDC43-203ENST00000588210 C2orf82Q6UX34 121 aa10.26□□□□□ -0.77
CCDC43-203ENST00000588210 COPS9Q8WXC6 57 aa10.26□□□□□ -0.77
CCDC43-203ENST00000588210 CLEC2BQ92478 149 aa10.25□□□□□ -0.77
CCDC43-203ENST00000588210 CDC42SE2Q9NRR3 84 aa10.25□□□□□ -0.77
CCDC43-203ENST00000588210 TEX49A0A1B0GTD5 131 aa10.24□□□□□ -0.77
CCDC43-203ENST00000588210 TENM3Q9P273 2699 aa10.24□□□□□ -0.77
CCDC43-203ENST00000588210 F5H768 121 aa10.24□□□□□ -0.77
CCDC43-203ENST00000588210 ZNF625Q96I27 306 aaPredicted RBP10.24□□□□□ -0.77
CCDC43-203ENST00000588210 TRAV13-1A0A0B4J241 112 aa10.23□□□□□ -0.77
CCDC43-203ENST00000588210 GAGE12JA6NER3 117 aa10.23□□□□□ -0.77
CCDC43-203ENST00000588210 GAGE4Q13068 117 aa10.23□□□□□ -0.77
CCDC43-203ENST00000588210 GAGE5Q13069 117 aa10.23□□□□□ -0.77
CCDC43-203ENST00000588210 C16orf74Q96GX8 76 aa10.23□□□□□ -0.77
CCDC43-203ENST00000588210 PPDPFQ9H3Y8 114 aa10.23□□□□□ -0.77
CCDC43-203ENST00000588210 TRAV8-4A0A0B4J246 113 aa10.22□□□□□ -0.77
CCDC43-203ENST00000588210 MIFP14174 115 aa10.22□□□□□ -0.77
CCDC43-203ENST00000588210 NOP10Q9NPE3 64 aaKnown RBP10.22□□□□□ -0.77
CCDC43-203ENST00000588210 X6R8D5 127 aa10.22□□□□□ -0.77
CCDC43-203ENST00000588210 PLAC8L1A1L4L8 177 aa10.22□□□□□ -0.77
CCDC43-203ENST00000588210 HERV-K104P63124 156 aa10.22□□□□□ -0.77
CCDC43-203ENST00000588210 TMEM243Q9BU79 118 aa10.22□□□□□ -0.77
CCDC43-203ENST00000588210 A0A0J9YWU9 116 aa10.21□□□□□ -0.77
CCDC43-203ENST00000588210 SOSTDC1Q6X4U4 206 aa10.21□□□□□ -0.77
CCDC43-203ENST00000588210 C11orf68Q9H3H3 251 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms