RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 SCO1O75880 301 aa10.2□□□□□ -0.78
NCLN-203ENST00000587740 LINC00614P0C842 121 aa10.2□□□□□ -0.78
NCLN-203ENST00000587740 XCL1P47992 114 aa10.2□□□□□ -0.78
NCLN-203ENST00000587740 FAM104AQ969W3 186 aa10.2□□□□□ -0.78
NCLN-203ENST00000587740 TOMM6Q96B49 74 aa10.2□□□□□ -0.78
NCLN-203ENST00000587740 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
NCLN-203ENST00000587740 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.19□□□□□ -0.78
NCLN-203ENST00000587740 LINC01549A6NIU2 74 aa10.19□□□□□ -0.78
NCLN-203ENST00000587740 TRGC2P03986 189 aa10.19□□□□□ -0.78
NCLN-203ENST00000587740 RAB5BP61020 215 aa10.19□□□□□ -0.78
NCLN-203ENST00000587740 Q6ZN92 141 aa10.19□□□□□ -0.78
NCLN-203ENST00000587740 AP5S1Q9NUS5 200 aa10.19□□□□□ -0.78
NCLN-203ENST00000587740 IFITM10A6NMD0 228 aa10.18□□□□□ -0.78
NCLN-203ENST00000587740 NPSP0C0P6 89 aa10.18□□□□□ -0.78
NCLN-203ENST00000587740 FOXI1Q12951 378 aa10.18□□□□□ -0.78
NCLN-203ENST00000587740 CFAP161Q6P656 301 aa10.18□□□□□ -0.78
NCLN-203ENST00000587740 CD164L2Q6UWJ8 174 aa10.18□□□□□ -0.78
NCLN-203ENST00000587740 IGIPA6NJ69 53 aa10.17□□□□□ -0.78
NCLN-203ENST00000587740 PAPPA-AS1Q5QFB9 102 aa10.17□□□□□ -0.78
NCLN-203ENST00000587740 TEX43Q6ZNM6 134 aa10.17□□□□□ -0.78
NCLN-203ENST00000587740 SCGB3A1Q96QR1 104 aa10.17□□□□□ -0.78
NCLN-203ENST00000587740 C2orf88Q9BSF0 95 aa10.17□□□□□ -0.78
NCLN-203ENST00000587740 VCX2Q9H322 139 aa10.17□□□□□ -0.78
NCLN-203ENST00000587740 S100A1P23297 94 aa10.16□□□□□ -0.78
NCLN-203ENST00000587740 ERASQ7Z444 233 aa10.16□□□□□ -0.78
NCLN-203ENST00000587740 URB1-AS1Q96HZ7 61 aa10.16□□□□□ -0.78
NCLN-203ENST00000587740 TIMM17AQ99595 171 aa10.16□□□□□ -0.78
NCLN-203ENST00000587740 hDV102S1A0JD36 115 aa10.15□□□□□ -0.78
NCLN-203ENST00000587740 PRSS1P07477 247 aa10.15□□□□□ -0.78
NCLN-203ENST00000587740 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
NCLN-203ENST00000587740 CIRBP-AS1Q8TBR5 109 aa10.14□□□□□ -0.79
NCLN-203ENST00000587740 AMELXQ99217 191 aa10.14□□□□□ -0.79
NCLN-203ENST00000587740 COX7A2LO14548 114 aa10.13□□□□□ -0.79
NCLN-203ENST00000587740 ATP6V1G1O75348 118 aa10.13□□□□□ -0.79
NCLN-203ENST00000587740 HBDP02042 147 aa10.13□□□□□ -0.79
NCLN-203ENST00000587740 MALP21145 153 aa10.13□□□□□ -0.79
NCLN-203ENST00000587740 BAGE3Q86Y29 109 aa10.13□□□□□ -0.79
NCLN-203ENST00000587740 C15orf56Q8N910 161 aa10.13□□□□□ -0.79
NCLN-203ENST00000587740 CHCHD1Q96BP2 118 aaKnown RBP10.13□□□□□ -0.79
NCLN-203ENST00000587740 IGHV1-58A0A0C4DH39 117 aa10.12□□□□□ -0.79
NCLN-203ENST00000587740 ZC2HC1BQ5TFG8 222 aa10.12□□□□□ -0.79
NCLN-203ENST00000587740 LINC00173Q6ZV60 143 aa10.12□□□□□ -0.79
NCLN-203ENST00000587740 UBE2D1P51668 147 aa10.11□□□□□ -0.79
NCLN-203ENST00000587740 HNRNPA3P51991 378 aaKnown RBP10.11□□□□□ -0.79
NCLN-203ENST00000587740 PMCHL1Q16048 86 aa10.11□□□□□ -0.79
NCLN-203ENST00000587740 HIGD2BQ4VC39 106 aa10.11□□□□□ -0.79
NCLN-203ENST00000587740 C5orf38Q86SI9 138 aa10.11□□□□□ -0.79
NCLN-203ENST00000587740 A0A096LNJ9 63 aa10.1□□□□□ -0.79
NCLN-203ENST00000587740 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.1□□□□□ -0.79
NCLN-203ENST00000587740 APOMO95445 188 aa10.1□□□□□ -0.79
NCLN-203ENST00000587740 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
NCLN-203ENST00000587740 RNF213Q63HN8 5207 aa10.09□□□□□ -0.79
NCLN-203ENST00000587740 GVQW2A0A096LPI5 108 aaPredicted RBP10.09□□□□□ -0.79
NCLN-203ENST00000587740 IGHV3OR16-9A0A0B4J2B5 98 aa10.09□□□□□ -0.79
NCLN-203ENST00000587740 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
NCLN-203ENST00000587740 ZNF561-AS1K7EIQ3 104 aa10.08□□□□□ -0.8
NCLN-203ENST00000587740 HSBP1O75506 76 aa10.08□□□□□ -0.8
NCLN-203ENST00000587740 CNBPP62633 177 aaKnown RBP10.08□□□□□ -0.8
NCLN-203ENST00000587740 SEC11AP67812 179 aa10.08□□□□□ -0.8
NCLN-203ENST00000587740 COX6A2Q02221 97 aa10.08□□□□□ -0.8
NCLN-203ENST00000587740 LRP2P98164 4655 aa10.08□□□□□ -0.8
NCLN-203ENST00000587740 ATP5LO75964 103 aa10.07□□□□□ -0.8
NCLN-203ENST00000587740 MT1HL1P0DM35 61 aa10.07□□□□□ -0.8
NCLN-203ENST00000587740 PMVKQ15126 192 aa10.07□□□□□ -0.8
NCLN-203ENST00000587740 PDZD11Q5EBL8 140 aa10.07□□□□□ -0.8
NCLN-203ENST00000587740 FAM19A3Q7Z5A8 133 aa10.07□□□□□ -0.8
NCLN-203ENST00000587740 HERVK_113P63121 156 aa10.06□□□□□ -0.8
NCLN-203ENST00000587740 C9orf163Q8N9P6 203 aa10.06□□□□□ -0.8
NCLN-203ENST00000587740 CST9LQ9H4G1 147 aa10.06□□□□□ -0.8
NCLN-203ENST00000587740 GEMIN7Q9H840 131 aaKnown RBP10.06□□□□□ -0.8
NCLN-203ENST00000587740 A0A087WZ39 114 aa10.05□□□□□ -0.8
NCLN-203ENST00000587740 SERF1AO75920 110 aa10.05□□□□□ -0.8
NCLN-203ENST00000587740 SLPIP03973 132 aa10.05□□□□□ -0.8
NCLN-203ENST00000587740 NDUFA6P56556 154 aa10.05□□□□□ -0.8
NCLN-203ENST00000587740 IGHV3-64A0A075B6Q5 118 aa10.04□□□□□ -0.8
NCLN-203ENST00000587740 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
NCLN-203ENST00000587740 FAM19A2Q8N3H0 131 aa10.04□□□□□ -0.8
NCLN-203ENST00000587740 OR10D4PQ8NGN7 298 aa10.04□□□□□ -0.8
NCLN-203ENST00000587740 ORAOV1Q8WV07 137 aa10.04□□□□□ -0.8
NCLN-203ENST00000587740 LINC00526Q96FQ7 95 aa10.04□□□□□ -0.8
NCLN-203ENST00000587740 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 TINCRA0A1B0GVN0 87 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST1H2BKO60814 126 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST1H2BJP06899 126 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST1H2BOP23527 126 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST1H2BBP33778 126 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST1H2BDP58876 126 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 RPL37AP61513 92 aaKnown RBP10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST1H2BCP62807 126 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 SPAG11BQ08648 103 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST2H2BEQ16778 126 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.03□□□□□ -0.8
NCLN-203ENST00000587740 LINC01561Q8N1V8 128 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST1H2BHQ93079 126 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST1H2BNQ99877 126 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 HIST1H2BMQ99879 126 aa10.03□□□□□ -0.8
NCLN-203ENST00000587740 TNXBP22105 4242 aa10.02□□□□□ -0.81
NCLN-203ENST00000587740 LINC00310P59036 64 aa10.02□□□□□ -0.81
NCLN-203ENST00000587740 IFI27L1Q96BM0 104 aa10.02□□□□□ -0.81
NCLN-203ENST00000587740 SYCNQ0VAF6 134 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms