RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CFAP161Q6P656 301 aa8.1□□□□□ -1.11
TOP3A-217ENST00000584582 Q8N2B8 174 aa8.1□□□□□ -1.11
TOP3A-217ENST00000584582 LINC01546A6NGU7 62 aa8.09□□□□□ -1.11
TOP3A-217ENST00000584582 IGLV1-51P01701 117 aa8.09□□□□□ -1.11
TOP3A-217ENST00000584582 DNAL4O96015 105 aa8.09□□□□□ -1.11
TOP3A-217ENST00000584582 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.09□□□□□ -1.11
TOP3A-217ENST00000584582 TRAV26-1A0A087WT03 109 aa8.09□□□□□ -1.11
TOP3A-217ENST00000584582 UFSP1Q6NVU6 142 aa8.09□□□□□ -1.11
TOP3A-217ENST00000584582 GAGE12HA6NDE8 117 aa8.08□□□□□ -1.12
TOP3A-217ENST00000584582 RPL32P62910 135 aaKnown RBP8.08□□□□□ -1.12
TOP3A-217ENST00000584582 VWFP04275 2813 aa8.08□□□□□ -1.12
TOP3A-217ENST00000584582 ATXN8Q156A1 80 aa8.08□□□□□ -1.12
TOP3A-217ENST00000584582 IGLV4-60A0A075B6I1 120 aa8.08□□□□□ -1.12
TOP3A-217ENST00000584582 G3V4G9 280 aa8.08□□□□□ -1.12
TOP3A-217ENST00000584582 CRPP02741 224 aa8.08□□□□□ -1.12
TOP3A-217ENST00000584582 SS18Q15532 418 aa8.08□□□□□ -1.12
TOP3A-217ENST00000584582 TINCRA0A1B0GVN0 87 aa8.07□□□□□ -1.12
TOP3A-217ENST00000584582 IGHV3-33P01772 117 aa8.07□□□□□ -1.12
TOP3A-217ENST00000584582 LINC00242Q5T6M2 205 aa8.07□□□□□ -1.12
TOP3A-217ENST00000584582 MIR7-3HGQ8N6C7 128 aa8.07□□□□□ -1.12
TOP3A-217ENST00000584582 NTM-AS1Q6ZSK4 140 aa8.07□□□□□ -1.12
TOP3A-217ENST00000584582 OTOGQ6ZRI0 2925 aa8.07□□□□□ -1.12
TOP3A-217ENST00000584582 C9orf66Q5T8R8 295 aa8.07□□□□□ -1.12
TOP3A-217ENST00000584582 TRBV10-1A0A0K0K1A3 114 aa8.06□□□□□ -1.12
TOP3A-217ENST00000584582 ANKRD29Q8N6D5 301 aa8.06□□□□□ -1.12
TOP3A-217ENST00000584582 SPATA3Q8NHX4 192 aa8.06□□□□□ -1.12
TOP3A-217ENST00000584582 UBE2D1P51668 147 aa8.06□□□□□ -1.12
TOP3A-217ENST00000584582 MRPS36P82909 103 aaKnown RBP8.06□□□□□ -1.12
TOP3A-217ENST00000584582 TRBV20-1A0A075B6N2 111 aa8.06□□□□□ -1.12
TOP3A-217ENST00000584582 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
TOP3A-217ENST00000584582 CARD19Q96LW7 228 aa8.06□□□□□ -1.12
TOP3A-217ENST00000584582 PYGO1Q9Y3Y4 419 aa8.06□□□□□ -1.12
TOP3A-217ENST00000584582 TENM1Q9UKZ4 2725 aa8.05□□□□□ -1.12
TOP3A-217ENST00000584582 UBE2WQ96B02 151 aa8.05□□□□□ -1.12
TOP3A-217ENST00000584582 ICOSQ9Y6W8 199 aa8.05□□□□□ -1.12
TOP3A-217ENST00000584582 TRIAP1O43715 76 aa8.05□□□□□ -1.12
TOP3A-217ENST00000584582 SPANXB1Q9NS25 103 aaPredicted RBP8.05□□□□□ -1.12
TOP3A-217ENST00000584582 TRBV6-8A0A0A6YYG3 113 aa8.05□□□□□ -1.12
TOP3A-217ENST00000584582 APOC4P55056 127 aa8.05□□□□□ -1.12
TOP3A-217ENST00000584582 UBE2D3P61077 147 aa8.05□□□□□ -1.12
TOP3A-217ENST00000584582 UBE2D2P62837 147 aa8.05□□□□□ -1.12
TOP3A-217ENST00000584582 KLK12Q9UKR0 248 aa8.05□□□□□ -1.12
TOP3A-217ENST00000584582 FHL3Q13643 280 aa8.04□□□□□ -1.12
TOP3A-217ENST00000584582 MIAQ16674 131 aa8.04□□□□□ -1.12
TOP3A-217ENST00000584582 COX7B2Q8TF08 81 aa8.04□□□□□ -1.12
TOP3A-217ENST00000584582 PRO0255Q9UI72 69 aa8.04□□□□□ -1.12
TOP3A-217ENST00000584582 RETNQ9HD89 108 aa8.04□□□□□ -1.12
TOP3A-217ENST00000584582 LINC01620Q4KN68 170 aa8.03□□□□□ -1.12
TOP3A-217ENST00000584582 Q9HAA7 133 aa8.03□□□□□ -1.12
TOP3A-217ENST00000584582 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
TOP3A-217ENST00000584582 CDC42SE2Q9NRR3 84 aa8.03□□□□□ -1.12
TOP3A-217ENST00000584582 BEAN1Q3B7T3 259 aa8.03□□□□□ -1.12
TOP3A-217ENST00000584582 AMELXQ99217 191 aa8.03□□□□□ -1.12
TOP3A-217ENST00000584582 IGHV4-28A0A0C4DH34 117 aa8.02□□□□□ -1.12
TOP3A-217ENST00000584582 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.12
TOP3A-217ENST00000584582 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.12
TOP3A-217ENST00000584582 FOXI1Q12951 378 aa8.02□□□□□ -1.12
TOP3A-217ENST00000584582 PPDPFLQ8WWR9 84 aa8.02□□□□□ -1.12
TOP3A-217ENST00000584582 SNCGO76070 127 aa8.02□□□□□ -1.13
TOP3A-217ENST00000584582 ATP5G1P05496 136 aa8.02□□□□□ -1.13
TOP3A-217ENST00000584582 KRTAP1-1Q07627 177 aa8.02□□□□□ -1.13
TOP3A-217ENST00000584582 Q8N3U1 123 aa8.02□□□□□ -1.13
TOP3A-217ENST00000584582 TRAV8-4A0A0B4J246 113 aa8.01□□□□□ -1.13
TOP3A-217ENST00000584582 LINC00308Q8TCZ7 52 aa8.01□□□□□ -1.13
TOP3A-217ENST00000584582 COPS9Q8WXC6 57 aa8.01□□□□□ -1.13
TOP3A-217ENST00000584582 KRTAP10-3P60369 221 aa8.01□□□□□ -1.13
TOP3A-217ENST00000584582 FHL2Q14192 279 aa8.01□□□□□ -1.13
TOP3A-217ENST00000584582 ZFAND6Q6FIF0 208 aa8.01□□□□□ -1.13
TOP3A-217ENST00000584582 TRBV6-4A0A1B0GX49 114 aa8□□□□□ -1.13
TOP3A-217ENST00000584582 S100A7L2Q5SY68 101 aa8□□□□□ -1.13
TOP3A-217ENST00000584582 TEN1Q86WV5 123 aa8□□□□□ -1.13
TOP3A-217ENST00000584582 SMIM1B2RUZ4 78 aa8□□□□□ -1.13
TOP3A-217ENST00000584582 SPART-AS1P0CW21 52 aa8□□□□□ -1.13
TOP3A-217ENST00000584582 GIG44P09565 113 aaPredicted RBP7.99□□□□□ -1.13
TOP3A-217ENST00000584582 FBN1P35555 2871 aaKnown RBP7.99□□□□□ -1.13
TOP3A-217ENST00000584582 IGHV4-30-4P0DP06 118 aa7.98□□□□□ -1.13
TOP3A-217ENST00000584582 PRR3P79522 188 aaKnown RBP7.98□□□□□ -1.13
TOP3A-217ENST00000584582 C9orf116Q5BN46 136 aaPredicted RBP7.98□□□□□ -1.13
TOP3A-217ENST00000584582 TTC32Q5I0X7 151 aa7.98□□□□□ -1.13
TOP3A-217ENST00000584582 C16orf95Q9H693 158 aa7.98□□□□□ -1.13
TOP3A-217ENST00000584582 TIRAPP58753 221 aa7.97□□□□□ -1.13
TOP3A-217ENST00000584582 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
TOP3A-217ENST00000584582 EDA2RQ9HAV5 297 aa7.97□□□□□ -1.13
TOP3A-217ENST00000584582 CLUHP3Q96NS8 147 aa7.97□□□□□ -1.13
TOP3A-217ENST00000584582 BAHCC1Q9P281 2608 aa7.97□□□□□ -1.13
TOP3A-217ENST00000584582 COX7A2LO14548 114 aa7.97□□□□□ -1.13
TOP3A-217ENST00000584582 NDUFA1O15239 70 aa7.97□□□□□ -1.13
TOP3A-217ENST00000584582 HIGD2BQ4VC39 106 aa7.97□□□□□ -1.13
TOP3A-217ENST00000584582 A0A0B4J2C4 111 aa7.96□□□□□ -1.13
TOP3A-217ENST00000584582 SLPIP03973 132 aa7.96□□□□□ -1.13
TOP3A-217ENST00000584582 MT-ATP8P03928 68 aa7.96□□□□□ -1.14
TOP3A-217ENST00000584582 CELA1Q9UNI1 258 aa7.96□□□□□ -1.14
TOP3A-217ENST00000584582 LINC00959A0A1B0GUT2 108 aa7.96□□□□□ -1.14
TOP3A-217ENST00000584582 BAALC-AS2P0C853 105 aa7.96□□□□□ -1.14
TOP3A-217ENST00000584582 IFITM1P13164 125 aa7.96□□□□□ -1.14
TOP3A-217ENST00000584582 REG3AQ06141 175 aa7.96□□□□□ -1.14
TOP3A-217ENST00000584582 MRPL23Q16540 153 aaKnown RBP7.96□□□□□ -1.14
TOP3A-217ENST00000584582 NCR3O14931 201 aa7.95□□□□□ -1.14
TOP3A-217ENST00000584582 CHCHD10Q8WYQ3 142 aaPredicted RBP7.95□□□□□ -1.14
TOP3A-217ENST00000584582 ZNF469Q96JG9 3925 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms