RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 HSPB8Q9UJY1 196 aa10.6□□□□□ -0.71
CSNK1D-223ENST00000584472 UBE2D1P51668 147 aa10.59□□□□□ -0.71
CSNK1D-223ENST00000584472 SPATA12Q7Z6I5 190 aa10.59□□□□□ -0.71
CSNK1D-223ENST00000584472 HIST3H2BBQ8N257 126 aa10.59□□□□□ -0.71
CSNK1D-223ENST00000584472 CHCHD10Q8WYQ3 142 aaPredicted RBP10.59□□□□□ -0.71
CSNK1D-223ENST00000584472 PACRGQ96M98 296 aaPredicted RBP10.59□□□□□ -0.71
CSNK1D-223ENST00000584472 CST9LQ9H4G1 147 aa10.59□□□□□ -0.71
CSNK1D-223ENST00000584472 C5orf52A6NGY3 159 aa10.58□□□□□ -0.72
CSNK1D-223ENST00000584472 PRSS1P07477 247 aa10.58□□□□□ -0.72
CSNK1D-223ENST00000584472 SNRPEP62304 92 aaKnown RBP10.58□□□□□ -0.72
CSNK1D-223ENST00000584472 LRCOL1A6NCL2 159 aa10.57□□□□□ -0.72
CSNK1D-223ENST00000584472 GAGE12HA6NDE8 117 aa10.57□□□□□ -0.72
CSNK1D-223ENST00000584472 XCL1P47992 114 aa10.57□□□□□ -0.72
CSNK1D-223ENST00000584472 KRTAP10-2P60368 255 aa10.57□□□□□ -0.72
CSNK1D-223ENST00000584472 LINC00242Q5T6M2 205 aa10.57□□□□□ -0.72
CSNK1D-223ENST00000584472 CDPF1Q6NVV7 123 aa10.57□□□□□ -0.72
CSNK1D-223ENST00000584472 FAM19A3Q7Z5A8 133 aa10.57□□□□□ -0.72
CSNK1D-223ENST00000584472 PGPEP1Q9NXJ5 209 aa10.57□□□□□ -0.72
CSNK1D-223ENST00000584472 TRAV12-1A0A0B4J245 112 aa10.56□□□□□ -0.72
CSNK1D-223ENST00000584472 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
CSNK1D-223ENST00000584472 MAPKAPK5-AS1Q8N8E1 139 aa10.56□□□□□ -0.72
CSNK1D-223ENST00000584472 TMA7Q9Y2S6 64 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-223ENST00000584472 LRP1BQ9NZR2 4599 aa10.56□□□□□ -0.72
CSNK1D-223ENST00000584472 S100A2P29034 98 aa10.55□□□□□ -0.72
CSNK1D-223ENST00000584472 FOXI1Q12951 378 aa10.55□□□□□ -0.72
CSNK1D-223ENST00000584472 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
CSNK1D-223ENST00000584472 A0A0J9YXV3 536 aa10.54□□□□□ -0.72
CSNK1D-223ENST00000584472 COX6A2Q02221 97 aa10.54□□□□□ -0.72
CSNK1D-223ENST00000584472 HIST1H2BLQ99880 126 aa10.54□□□□□ -0.72
CSNK1D-223ENST00000584472 HSPG2P98160 4391 aa10.54□□□□□ -0.72
CSNK1D-223ENST00000584472 IGHV3OR16-9A0A0B4J2B5 98 aa10.53□□□□□ -0.72
CSNK1D-223ENST00000584472 H0Y8G0 127 aa10.53□□□□□ -0.72
CSNK1D-223ENST00000584472 SEC11AP67812 179 aa10.53□□□□□ -0.72
CSNK1D-223ENST00000584472 IGLV4-69A0A075B6H9 119 aa10.52□□□□□ -0.73
CSNK1D-223ENST00000584472 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.73
CSNK1D-223ENST00000584472 IGLC3P0DOY3 106 aa10.52□□□□□ -0.73
CSNK1D-223ENST00000584472 HERVK_113P63121 156 aa10.52□□□□□ -0.73
CSNK1D-223ENST00000584472 Q8N814 137 aa10.52□□□□□ -0.73
CSNK1D-223ENST00000584472 NTN5Q8WTR8 489 aaPredicted RBP10.52□□□□□ -0.73
CSNK1D-223ENST00000584472 CHTOPQ9Y3Y2 248 aaKnown RBP10.52□□□□□ -0.73
CSNK1D-223ENST00000584472 F8VRH5 84 aa10.51□□□□□ -0.73
CSNK1D-223ENST00000584472 SYS1-DBNDD2H3BUS1 97 aa10.51□□□□□ -0.73
CSNK1D-223ENST00000584472 ODF1Q14990 250 aa10.51□□□□□ -0.73
CSNK1D-223ENST00000584472 GEMIN7Q9H840 131 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-223ENST00000584472 MRPL35Q9NZE8 188 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-223ENST00000584472 ABCA13Q86UQ4 5058 aa10.51□□□□□ -0.73
CSNK1D-223ENST00000584472 COX7A2LO14548 114 aa10.5□□□□□ -0.73
CSNK1D-223ENST00000584472 C3orf79P0CE67 100 aa10.5□□□□□ -0.73
CSNK1D-223ENST00000584472 C5orf38Q86SI9 138 aa10.5□□□□□ -0.73
CSNK1D-223ENST00000584472 CHAC1Q9BUX1 264 aa10.5□□□□□ -0.73
CSNK1D-223ENST00000584472 IGLV5-45A0A087WSX0 123 aa10.49□□□□□ -0.73
CSNK1D-223ENST00000584472 KRTDAPP60985 99 aa10.49□□□□□ -0.73
CSNK1D-223ENST00000584472 WFDC2Q14508 124 aa10.49□□□□□ -0.73
CSNK1D-223ENST00000584472 DNAH5Q8TE73 4624 aa10.48□□□□□ -0.73
CSNK1D-223ENST00000584472 A0A087WZ39 114 aa10.48□□□□□ -0.73
CSNK1D-223ENST00000584472 C11orf86A6NJI1 115 aa10.48□□□□□ -0.73
CSNK1D-223ENST00000584472 LECT2O14960 151 aa10.48□□□□□ -0.73
CSNK1D-223ENST00000584472 PET117Q6UWS5 81 aa10.48□□□□□ -0.73
CSNK1D-223ENST00000584472 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
CSNK1D-223ENST00000584472 IGLV5-52A0A0A0MRZ9 124 aa10.47□□□□□ -0.73
CSNK1D-223ENST00000584472 USP17L23D6RBM5 183 aa10.47□□□□□ -0.73
CSNK1D-223ENST00000584472 MALP21145 153 aa10.47□□□□□ -0.73
CSNK1D-223ENST00000584472 LINC01561Q8N1V8 128 aa10.47□□□□□ -0.73
CSNK1D-223ENST00000584472 Q8N1X5 172 aa10.47□□□□□ -0.73
CSNK1D-223ENST00000584472 LINC00469Q8N7U9 141 aa10.47□□□□□ -0.73
CSNK1D-223ENST00000584472 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
CSNK1D-223ENST00000584472 APOBP04114 4563 aaKnown RBP10.46□□□□□ -0.73
CSNK1D-223ENST00000584472 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.73
CSNK1D-223ENST00000584472 ZNF22P17026 224 aaPredicted RBP10.46□□□□□ -0.73
CSNK1D-223ENST00000584472 FUSP35637 526 aaKnown RBP eCLIP10.46□□□□□ -0.734e-7■■■■□ 25
CSNK1D-223ENST00000584472 C14orf177Q52M58 125 aa10.46□□□□□ -0.73
CSNK1D-223ENST00000584472 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
CSNK1D-223ENST00000584472 LINC01545Q5VT33 79 aa10.46□□□□□ -0.73
CSNK1D-223ENST00000584472 PMCHL2Q9BQD1 86 aa10.46□□□□□ -0.73
CSNK1D-223ENST00000584472 APOMO95445 188 aa10.45□□□□□ -0.74
CSNK1D-223ENST00000584472 CFAP161Q6P656 301 aa10.45□□□□□ -0.74
CSNK1D-223ENST00000584472 IGHV3-64A0A075B6Q5 118 aa10.44□□□□□ -0.74
CSNK1D-223ENST00000584472 DPM2O94777 84 aa10.44□□□□□ -0.74
CSNK1D-223ENST00000584472 GCSHP23434 173 aa10.44□□□□□ -0.74
CSNK1D-223ENST00000584472 PLNP26678 52 aa10.44□□□□□ -0.74
CSNK1D-223ENST00000584472 GVQW2A0A096LPI5 108 aaPredicted RBP10.43□□□□□ -0.74
CSNK1D-223ENST00000584472 H3BRM9 83 aa10.43□□□□□ -0.74
CSNK1D-223ENST00000584472 IGKCP01834 107 aa10.43□□□□□ -0.74
CSNK1D-223ENST00000584472 TMEM170BQ5T4T1 132 aa10.43□□□□□ -0.74
CSNK1D-223ENST00000584472 KRTAP4-5Q9BYR2 181 aa10.43□□□□□ -0.74
CSNK1D-223ENST00000584472 SMIM1B2RUZ4 78 aa10.42□□□□□ -0.74
CSNK1D-223ENST00000584472 HIGD2BQ4VC39 106 aa10.42□□□□□ -0.74
CSNK1D-223ENST00000584472 OR10D4PQ8NGN7 298 aa10.42□□□□□ -0.74
CSNK1D-223ENST00000584472 hDV102S1A0JD36 115 aa10.41□□□□□ -0.74
CSNK1D-223ENST00000584472 C20orf202A1L168 122 aa10.41□□□□□ -0.74
CSNK1D-223ENST00000584472 SPINK8P0C7L1 97 aa10.41□□□□□ -0.74
CSNK1D-223ENST00000584472 KRTAP10-1P60331 282 aa10.41□□□□□ -0.74
CSNK1D-223ENST00000584472 ORAOV1Q8WV07 137 aa10.41□□□□□ -0.74
CSNK1D-223ENST00000584472 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.4□□□□□ -0.74
CSNK1D-223ENST00000584472 TMEM223A0PJW6 202 aa10.4□□□□□ -0.74
CSNK1D-223ENST00000584472 SPAG11BQ08648 103 aa10.39□□□□□ -0.75
CSNK1D-223ENST00000584472 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
CSNK1D-223ENST00000584472 ZNF561-AS1K7EIQ3 104 aa10.38□□□□□ -0.75
CSNK1D-223ENST00000584472 KIAA0087Q14695 138 aa10.38□□□□□ -0.75
CSNK1D-223ENST00000584472 LINC00526Q96FQ7 95 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms