RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CCL25O15444 150 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 RBX1P62877 108 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 LINC01556Q5JQF7 62 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 Q6ZVH6 145 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 PCP2Q8IVA1 136 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 OR5A1Q8NGJ0 315 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 TMEM101Q96IK0 257 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 MRPL35Q9NZE8 188 aaKnown RBP7.43□□□□□ -1.22
TOP3A-216ENST00000583804 ALMS1Q8TCU4 4167 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 IGKV2D-26A0A0A0MRZ7 120 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 NBDYA0A0U1RRE5 68 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 ERASQ7Z444 233 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 SPANXA1Q9NS26 97 aa7.43□□□□□ -1.22
TOP3A-216ENST00000583804 VPS13DQ5THJ4 4388 aa7.42□□□□□ -1.22
TOP3A-216ENST00000583804 H7C423 109 aa7.42□□□□□ -1.22
TOP3A-216ENST00000583804 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
TOP3A-216ENST00000583804 VAMP3Q15836 100 aa7.42□□□□□ -1.22
TOP3A-216ENST00000583804 TAL2Q16559 108 aa7.42□□□□□ -1.22
TOP3A-216ENST00000583804 TTC32Q5I0X7 151 aa7.42□□□□□ -1.22
TOP3A-216ENST00000583804 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
TOP3A-216ENST00000583804 TMEM141Q96I45 108 aa7.42□□□□□ -1.22
TOP3A-216ENST00000583804 KLK12Q9UKR0 248 aa7.42□□□□□ -1.22
TOP3A-216ENST00000583804 CHTOPQ9Y3Y2 248 aaKnown RBP7.42□□□□□ -1.22
TOP3A-216ENST00000583804 TRAV13-1A0A0B4J241 112 aa7.41□□□□□ -1.22
TOP3A-216ENST00000583804 PRSS29PA6NIE9 313 aa7.41□□□□□ -1.22
TOP3A-216ENST00000583804 C10orf126Q8N4M7 172 aa7.41□□□□□ -1.22
TOP3A-216ENST00000583804 TIMM17AQ99595 171 aa7.41□□□□□ -1.22
TOP3A-216ENST00000583804 A0A1B0GUV1 79 aa7.4□□□□□ -1.22
TOP3A-216ENST00000583804 C9orf118A6NHY6 69 aa7.4□□□□□ -1.22
TOP3A-216ENST00000583804 K7EP13 123 aa7.4□□□□□ -1.22
TOP3A-216ENST00000583804 SMAGPQ0VAQ4 97 aa7.4□□□□□ -1.22
TOP3A-216ENST00000583804 PAPPA-AS1Q5QFB9 102 aa7.4□□□□□ -1.22
TOP3A-216ENST00000583804 CHAC1Q9BUX1 264 aa7.4□□□□□ -1.22
TOP3A-216ENST00000583804 KRTAP1-5Q9BYS1 174 aa7.4□□□□□ -1.22
TOP3A-216ENST00000583804 VCX2Q9H322 139 aa7.4□□□□□ -1.22
TOP3A-216ENST00000583804 PMVKQ15126 192 aa7.39□□□□□ -1.23
TOP3A-216ENST00000583804 LINC00269Q8N2A0 174 aa7.39□□□□□ -1.23
TOP3A-216ENST00000583804 UBE2WQ96B02 151 aa7.39□□□□□ -1.23
TOP3A-216ENST00000583804 TM2D2Q9BX73 214 aa7.39□□□□□ -1.23
TOP3A-216ENST00000583804 CST9LQ9H4G1 147 aa7.39□□□□□ -1.23
TOP3A-216ENST00000583804 Q9HAA7 133 aa7.39□□□□□ -1.23
TOP3A-216ENST00000583804 CDC42SE2Q9NRR3 84 aa7.39□□□□□ -1.23
TOP3A-216ENST00000583804 PYGO1Q9Y3Y4 419 aa7.39□□□□□ -1.23
TOP3A-216ENST00000583804 DNAH1Q9P2D7 4330 aa7.39□□□□□ -1.23
TOP3A-216ENST00000583804 IGLV10-54A0A075B6I4 117 aa7.38□□□□□ -1.23
TOP3A-216ENST00000583804 IBA57-AS1B1ANH7 110 aa7.38□□□□□ -1.23
TOP3A-216ENST00000583804 CRPP02741 224 aa7.38□□□□□ -1.23
TOP3A-216ENST00000583804 Q6ZR54 194 aa7.38□□□□□ -1.23
TOP3A-216ENST00000583804 TIMM21Q9BVV7 248 aa7.38□□□□□ -1.23
TOP3A-216ENST00000583804 A0A0J9YXV3 536 aa7.37□□□□□ -1.23
TOP3A-216ENST00000583804 E9PLD3 99 aa7.37□□□□□ -1.23
TOP3A-216ENST00000583804 MRPS36P82909 103 aaKnown RBP7.36□□□□□ -1.23
TOP3A-216ENST00000583804 AMELXQ99217 191 aa7.36□□□□□ -1.23
TOP3A-216ENST00000583804 CSDC2Q9Y534 153 aaKnown RBP7.36□□□□□ -1.23
TOP3A-216ENST00000583804 TRAV8-3A0A0A6YYJ7 113 aa7.36□□□□□ -1.23
TOP3A-216ENST00000583804 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
TOP3A-216ENST00000583804 REG3AQ06141 175 aa7.36□□□□□ -1.23
TOP3A-216ENST00000583804 ENHOQ6UWT2 76 aa7.36□□□□□ -1.23
TOP3A-216ENST00000583804 GTF2H5Q6ZYL4 71 aa7.36□□□□□ -1.23
TOP3A-216ENST00000583804 CEND1Q8N111 149 aa7.36□□□□□ -1.23
TOP3A-216ENST00000583804 C6orf223Q8N319 242 aa7.36□□□□□ -1.23
TOP3A-216ENST00000583804 MAPKAPK5-AS1Q8N8E1 139 aa7.36□□□□□ -1.23
TOP3A-216ENST00000583804 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
TOP3A-216ENST00000583804 SACSQ9NZJ4 4579 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 IGLV4-69A0A075B6H9 119 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 IGHV3-64A0A075B6Q5 118 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 MYMXA0A1B0GTQ4 84 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 C11orf86A6NJI1 115 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 XCL1P47992 114 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 UBE2D1P51668 147 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 FXYD2P54710 66 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 KMT2AQ03164 3969 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 C1orf134Q5TEV5 83 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 PGPEP1Q9NXJ5 209 aa7.35□□□□□ -1.23
TOP3A-216ENST00000583804 IGKV2D-24A0A075B6R9 120 aa7.34□□□□□ -1.23
TOP3A-216ENST00000583804 K7EP34 96 aa7.34□□□□□ -1.23
TOP3A-216ENST00000583804 GCSHP23434 173 aa7.34□□□□□ -1.23
TOP3A-216ENST00000583804 HERVK_113P61574 105 aa7.34□□□□□ -1.23
TOP3A-216ENST00000583804 COX6A2Q02221 97 aa7.34□□□□□ -1.23
TOP3A-216ENST00000583804 MIAQ16674 131 aa7.34□□□□□ -1.23
TOP3A-216ENST00000583804 TMEM170BQ5T4T1 132 aa7.34□□□□□ -1.23
TOP3A-216ENST00000583804 NFE4Q86UQ8 179 aa7.34□□□□□ -1.23
TOP3A-216ENST00000583804 PRR34Q9NV39 138 aa7.34□□□□□ -1.23
TOP3A-216ENST00000583804 LINC00959A0A1B0GUT2 108 aa7.33□□□□□ -1.24
TOP3A-216ENST00000583804 A0A1W2PPM0 123 aa7.33□□□□□ -1.24
TOP3A-216ENST00000583804 GAGE10A6NGK3 116 aa7.33□□□□□ -1.24
TOP3A-216ENST00000583804 H3BUT2 72 aa7.33□□□□□ -1.24
TOP3A-216ENST00000583804 RMI2Q96E14 147 aa7.33□□□□□ -1.24
TOP3A-216ENST00000583804 C1orf43Q9BWL3 253 aa7.33□□□□□ -1.24
TOP3A-216ENST00000583804 GEMIN7Q9H840 131 aaKnown RBP7.33□□□□□ -1.24
TOP3A-216ENST00000583804 A0A1B0GWB2 263 aa7.32□□□□□ -1.24
TOP3A-216ENST00000583804 PSCAO43653 123 aa7.32□□□□□ -1.24
TOP3A-216ENST00000583804 LINC00242Q5T6M2 205 aa7.32□□□□□ -1.24
TOP3A-216ENST00000583804 TRAV8-4A0A0B4J246 113 aa7.31□□□□□ -1.24
TOP3A-216ENST00000583804 GAGE12HA6NDE8 117 aa7.31□□□□□ -1.24
TOP3A-216ENST00000583804 SPINK8P0C7L1 97 aa7.31□□□□□ -1.24
TOP3A-216ENST00000583804 ZNF22P17026 224 aaPredicted RBP7.31□□□□□ -1.24
TOP3A-216ENST00000583804 SS18Q15532 418 aa7.31□□□□□ -1.24
TOP3A-216ENST00000583804 C5orf38Q86SI9 138 aa7.31□□□□□ -1.24
TOP3A-216ENST00000583804 CHCHD10Q8WYQ3 142 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms