RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
ERBB2-215ENST00000583391 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.57□□□□□ -1.04
ERBB2-215ENST00000583391 COX7A2LO14548 114 aa8.57□□□□□ -1.04
ERBB2-215ENST00000583391 KRTAP10-2P60368 255 aa8.57□□□□□ -1.04
ERBB2-215ENST00000583391 PMVKQ15126 192 aa8.57□□□□□ -1.04
ERBB2-215ENST00000583391 LINC00242Q5T6M2 205 aa8.57□□□□□ -1.04
ERBB2-215ENST00000583391 HIGD2BQ4VC39 106 aa8.56□□□□□ -1.04
ERBB2-215ENST00000583391 C14orf177Q52M58 125 aa8.56□□□□□ -1.04
ERBB2-215ENST00000583391 C5orf38Q86SI9 138 aa8.56□□□□□ -1.04
ERBB2-215ENST00000583391 C15orf56Q8N910 161 aa8.56□□□□□ -1.04
ERBB2-215ENST00000583391 IFI27L1Q96BM0 104 aa8.56□□□□□ -1.04
ERBB2-215ENST00000583391 CST9LQ9H4G1 147 aa8.56□□□□□ -1.04
ERBB2-215ENST00000583391 A0A0J9YXV3 536 aa8.55□□□□□ -1.04
ERBB2-215ENST00000583391 LEPROTL1O95214 131 aa8.55□□□□□ -1.04
ERBB2-215ENST00000583391 FABP4P15090 132 aa8.55□□□□□ -1.04
ERBB2-215ENST00000583391 MALP21145 153 aa8.55□□□□□ -1.04
ERBB2-215ENST00000583391 COX6A2Q02221 97 aa8.55□□□□□ -1.04
ERBB2-215ENST00000583391 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
ERBB2-215ENST00000583391 hDV102S1A0JD36 115 aa8.54□□□□□ -1.04
ERBB2-215ENST00000583391 PRSS1P07477 247 aa8.54□□□□□ -1.04
ERBB2-215ENST00000583391 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
ERBB2-215ENST00000583391 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
ERBB2-215ENST00000583391 IGLV5-52A0A0A0MRZ9 124 aa8.53□□□□□ -1.04
ERBB2-215ENST00000583391 IGHV1-58A0A0C4DH39 117 aa8.53□□□□□ -1.04
ERBB2-215ENST00000583391 H0Y8G0 127 aa8.53□□□□□ -1.04
ERBB2-215ENST00000583391 HERVK_113P63121 156 aa8.53□□□□□ -1.04
ERBB2-215ENST00000583391 SEC11AP67812 179 aa8.53□□□□□ -1.04
ERBB2-215ENST00000583391 COA6Q5JTJ3 125 aaKnown RBP8.53□□□□□ -1.04
ERBB2-215ENST00000583391 FAM19A3Q7Z5A8 133 aa8.53□□□□□ -1.04
ERBB2-215ENST00000583391 HSPB8Q9UJY1 196 aa8.53□□□□□ -1.04
ERBB2-215ENST00000583391 GVQW2A0A096LPI5 108 aaPredicted RBP8.52□□□□□ -1.05
ERBB2-215ENST00000583391 LINC00469Q8N7U9 141 aa8.52□□□□□ -1.05
ERBB2-215ENST00000583391 NTN5Q8WTR8 489 aaPredicted RBP8.52□□□□□ -1.05
ERBB2-215ENST00000583391 CHAC1Q9BUX1 264 aa8.52□□□□□ -1.05
ERBB2-215ENST00000583391 LRP1BQ9NZR2 4599 aa8.52□□□□□ -1.05
ERBB2-215ENST00000583391 IGLV4-69A0A075B6H9 119 aa8.51□□□□□ -1.05
ERBB2-215ENST00000583391 A0A087WZ39 114 aa8.51□□□□□ -1.05
ERBB2-215ENST00000583391 TINCRA0A1B0GVN0 87 aa8.51□□□□□ -1.05
ERBB2-215ENST00000583391 C16orf90A8MZG2 172 aa8.51□□□□□ -1.05
ERBB2-215ENST00000583391 APOMO95445 188 aa8.51□□□□□ -1.05
ERBB2-215ENST00000583391 IGLC3P0DOY3 106 aa8.51□□□□□ -1.05
ERBB2-215ENST00000583391 CDPF1Q6NVV7 123 aa8.51□□□□□ -1.05
ERBB2-215ENST00000583391 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
ERBB2-215ENST00000583391 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
ERBB2-215ENST00000583391 CDKN2A-AS1Q9UH64 79 aa8.51□□□□□ -1.05
ERBB2-215ENST00000583391 SPAG11BQ08648 103 aa8.5□□□□□ -1.05
ERBB2-215ENST00000583391 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
ERBB2-215ENST00000583391 CHTOPQ9Y3Y2 248 aaKnown RBP8.5□□□□□ -1.05
ERBB2-215ENST00000583391 IGHV3-64A0A075B6Q5 118 aa8.49□□□□□ -1.05
ERBB2-215ENST00000583391 TRAV12-1A0A0B4J245 112 aa8.49□□□□□ -1.05
ERBB2-215ENST00000583391 ZNF561-AS1K7EIQ3 104 aa8.49□□□□□ -1.05
ERBB2-215ENST00000583391 OR10D4PQ8NGN7 298 aa8.49□□□□□ -1.05
ERBB2-215ENST00000583391 PACRGQ96M98 296 aaPredicted RBP8.49□□□□□ -1.05
ERBB2-215ENST00000583391 IGLV5-45A0A087WSX0 123 aa8.48□□□□□ -1.05
ERBB2-215ENST00000583391 C11orf86A6NJI1 115 aa8.48□□□□□ -1.05
ERBB2-215ENST00000583391 S100A6P06703 90 aa8.48□□□□□ -1.05
ERBB2-215ENST00000583391 ZNF22P17026 224 aaPredicted RBP8.48□□□□□ -1.05
ERBB2-215ENST00000583391 LINC01620Q4KN68 170 aa8.48□□□□□ -1.05
ERBB2-215ENST00000583391 MAP1LC3CQ9BXW4 147 aa8.48□□□□□ -1.05
ERBB2-215ENST00000583391 MRPL35Q9NZE8 188 aaKnown RBP8.48□□□□□ -1.05
ERBB2-215ENST00000583391 DNAH8Q96JB1 4490 aa8.47□□□□□ -1.05
ERBB2-215ENST00000583391 F8VRH5 84 aa8.47□□□□□ -1.05
ERBB2-215ENST00000583391 SLPIP03973 132 aa8.47□□□□□ -1.05
ERBB2-215ENST00000583391 SPINK8P0C7L1 97 aa8.47□□□□□ -1.05
ERBB2-215ENST00000583391 CNBPP62633 177 aaKnown RBP8.47□□□□□ -1.05
ERBB2-215ENST00000583391 ODF1Q14990 250 aa8.47□□□□□ -1.05
ERBB2-215ENST00000583391 LINC01561Q8N1V8 128 aa8.47□□□□□ -1.05
ERBB2-215ENST00000583391 BIRC6Q9NR09 4857 aa8.46□□□□□ -1.06
ERBB2-215ENST00000583391 SMIM1B2RUZ4 78 aa8.46□□□□□ -1.06
ERBB2-215ENST00000583391 H3BRM9 83 aa8.46□□□□□ -1.06
ERBB2-215ENST00000583391 GCSHP23434 173 aa8.46□□□□□ -1.06
ERBB2-215ENST00000583391 TOMM7Q9P0U1 55 aa8.46□□□□□ -1.06
ERBB2-215ENST00000583391 APOBP04114 4563 aaKnown RBP8.46□□□□□ -1.06
ERBB2-215ENST00000583391 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.45□□□□□ -1.06
ERBB2-215ENST00000583391 TMEM170BQ5T4T1 132 aa8.45□□□□□ -1.06
ERBB2-215ENST00000583391 HIST3H2BBQ8N257 126 aa8.45□□□□□ -1.06
ERBB2-215ENST00000583391 CARD19Q96LW7 228 aa8.45□□□□□ -1.06
ERBB2-215ENST00000583391 CAMK2N2Q96S95 79 aa8.45□□□□□ -1.06
ERBB2-215ENST00000583391 PMCHL2Q9BQD1 86 aa8.45□□□□□ -1.06
ERBB2-215ENST00000583391 SYS1-DBNDD2H3BUS1 97 aa8.44□□□□□ -1.06
ERBB2-215ENST00000583391 PRSS2P07478 247 aa8.44□□□□□ -1.06
ERBB2-215ENST00000583391 S100A2P29034 98 aa8.44□□□□□ -1.06
ERBB2-215ENST00000583391 KRTAP10-1P60331 282 aa8.44□□□□□ -1.06
ERBB2-215ENST00000583391 SYCNQ0VAF6 134 aa8.44□□□□□ -1.06
ERBB2-215ENST00000583391 C3orf79P0CE67 100 aa8.43□□□□□ -1.06
ERBB2-215ENST00000583391 KRTDAPP60985 99 aa8.43□□□□□ -1.06
ERBB2-215ENST00000583391 SNRPEP62304 92 aaKnown RBP8.43□□□□□ -1.06
ERBB2-215ENST00000583391 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
ERBB2-215ENST00000583391 Q6ZRU5 148 aa8.43□□□□□ -1.06
ERBB2-215ENST00000583391 C9orf163Q8N9P6 203 aa8.43□□□□□ -1.06
ERBB2-215ENST00000583391 C2orf48Q96LS8 159 aa8.43□□□□□ -1.06
ERBB2-215ENST00000583391 NDUFA1O15239 70 aa8.42□□□□□ -1.06
ERBB2-215ENST00000583391 DPM2O94777 84 aa8.42□□□□□ -1.06
ERBB2-215ENST00000583391 PLNP26678 52 aa8.42□□□□□ -1.06
ERBB2-215ENST00000583391 C2orf82Q6UX34 121 aa8.42□□□□□ -1.06
ERBB2-215ENST00000583391 Q8IZM0 81 aa8.42□□□□□ -1.06
ERBB2-215ENST00000583391 COX7B2Q8TF08 81 aa8.41□□□□□ -1.06
ERBB2-215ENST00000583391 HIST1H2BLQ99880 126 aa8.41□□□□□ -1.06
ERBB2-215ENST00000583391 TMA7Q9Y2S6 64 aaKnown RBP8.41□□□□□ -1.06
ERBB2-215ENST00000583391 IGLV5-39A0A0G2JS06 123 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms