RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 CEBPGP53567 150 aa9.66□□□□□ -0.86
SREBF1-221ENST00000583080 SMAGPQ0VAQ4 97 aa9.66□□□□□ -0.86
SREBF1-221ENST00000583080 GAGE2EQ4V326 116 aa9.66□□□□□ -0.86
SREBF1-221ENST00000583080 UNQ6190/PRO20217Q6UXQ8 127 aa9.66□□□□□ -0.86
SREBF1-221ENST00000583080 IMMP2LQ96T52 175 aa9.66□□□□□ -0.86
SREBF1-221ENST00000583080 TIMM21Q9BVV7 248 aa9.66□□□□□ -0.86
SREBF1-221ENST00000583080 GAGE2DQ9UEU5 116 aa9.66□□□□□ -0.86
SREBF1-221ENST00000583080 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.86
SREBF1-221ENST00000583080 M0QXV9 152 aa9.65□□□□□ -0.86
SREBF1-221ENST00000583080 TLX1NBP0CAT3 122 aa9.65□□□□□ -0.86
SREBF1-221ENST00000583080 RPL39P62891 51 aaKnown RBP9.65□□□□□ -0.86
SREBF1-221ENST00000583080 KIR2DL4Q99706 377 aa9.65□□□□□ -0.86
SREBF1-221ENST00000583080 SMDT1Q9H4I9 107 aa9.65□□□□□ -0.86
SREBF1-221ENST00000583080 LOC105371267A0A1B0GV96 52 aa9.64□□□□□ -0.87
SREBF1-221ENST00000583080 LINC01551Q86U37 167 aa9.64□□□□□ -0.87
SREBF1-221ENST00000583080 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
SREBF1-221ENST00000583080 UBE2BP63146 152 aa9.63□□□□□ -0.87
SREBF1-221ENST00000583080 F8WDY8 70 aa9.62□□□□□ -0.87
SREBF1-221ENST00000583080 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
SREBF1-221ENST00000583080 PPP1R17O96001 155 aa9.61□□□□□ -0.87
SREBF1-221ENST00000583080 MRPL51Q4U2R6 128 aaKnown RBP9.61□□□□□ -0.87
SREBF1-221ENST00000583080 TMEM18Q96B42 140 aa9.61□□□□□ -0.87
SREBF1-221ENST00000583080 SMIM7Q9BQ49 75 aa9.61□□□□□ -0.87
SREBF1-221ENST00000583080 OSTCQ9NRP0 149 aa9.61□□□□□ -0.87
SREBF1-221ENST00000583080 FAT4Q6V0I7 4981 aa9.61□□□□□ -0.87
SREBF1-221ENST00000583080 PPP1R2P9O14990 202 aa9.6□□□□□ -0.87
SREBF1-221ENST00000583080 RIGQ13278 110 aa9.6□□□□□ -0.87
SREBF1-221ENST00000583080 TMEM241Q24JQ0 296 aa9.6□□□□□ -0.87
SREBF1-221ENST00000583080 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
SREBF1-221ENST00000583080 V9GYV3 84 aa9.6□□□□□ -0.87
SREBF1-221ENST00000583080 IFITM10A6NMD0 228 aa9.59□□□□□ -0.87
SREBF1-221ENST00000583080 KIAA0087Q14695 138 aa9.59□□□□□ -0.87
SREBF1-221ENST00000583080 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
SREBF1-221ENST00000583080 SVBPQ8N300 66 aa9.59□□□□□ -0.87
SREBF1-221ENST00000583080 TSPAN13O95857 204 aa9.58□□□□□ -0.88
SREBF1-221ENST00000583080 HBBP68871 147 aa9.58□□□□□ -0.88
SREBF1-221ENST00000583080 FAM104BQ5XKR9 115 aa9.58□□□□□ -0.88
SREBF1-221ENST00000583080 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
SREBF1-221ENST00000583080 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
SREBF1-221ENST00000583080 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
SREBF1-221ENST00000583080 ALKAL2Q6UX46 152 aa9.57□□□□□ -0.88
SREBF1-221ENST00000583080 C20orf78Q9BR46 151 aa9.57□□□□□ -0.88
SREBF1-221ENST00000583080 CARHSP1Q9Y2V2 147 aaKnown RBP9.57□□□□□ -0.88
SREBF1-221ENST00000583080 ZNF727A8MUV8 499 aa9.56□□□□□ -0.88
SREBF1-221ENST00000583080 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
SREBF1-221ENST00000583080 C10orf91Q5T1B1 145 aa9.56□□□□□ -0.88
SREBF1-221ENST00000583080 SMIM2Q9BVW6 85 aa9.56□□□□□ -0.88
SREBF1-221ENST00000583080 TRBV24-1A0A075B6N3 115 aa9.55□□□□□ -0.88
SREBF1-221ENST00000583080 TGIF2-C20orf24A0A0A6YYL0 155 aa9.55□□□□□ -0.88
SREBF1-221ENST00000583080 TRBV30A0A0K0K1B3 111 aa9.55□□□□□ -0.88
SREBF1-221ENST00000583080 NDUFC2-KCTD14E9PQ53 114 aa9.55□□□□□ -0.88
SREBF1-221ENST00000583080 ZNF861PO60384 105 aa9.55□□□□□ -0.88
SREBF1-221ENST00000583080 TNFRSF6BO95407 300 aa9.55□□□□□ -0.88
SREBF1-221ENST00000583080 BLOC1S1P78537 153 aa9.55□□□□□ -0.88
SREBF1-221ENST00000583080 NAT8BQ9UHF3 227 aa9.55□□□□□ -0.88
SREBF1-221ENST00000583080 TMA7Q9Y2S6 64 aaKnown RBP9.55□□□□□ -0.88
SREBF1-221ENST00000583080 TCAPO15273 167 aa9.54□□□□□ -0.88
SREBF1-221ENST00000583080 SNAPINO95295 136 aa9.54□□□□□ -0.88
SREBF1-221ENST00000583080 CKS2P33552 79 aa9.54□□□□□ -0.88
SREBF1-221ENST00000583080 SEC11CQ9BY50 192 aa9.54□□□□□ -0.88
SREBF1-221ENST00000583080 EIF5A2Q9GZV4 153 aaKnown RBP9.54□□□□□ -0.88
SREBF1-221ENST00000583080 A0A087X002 238 aa9.53□□□□□ -0.88
SREBF1-221ENST00000583080 KRTAP9-6A0A140TA67 174 aa9.53□□□□□ -0.88
SREBF1-221ENST00000583080 NPYP01303 97 aa9.53□□□□□ -0.88
SREBF1-221ENST00000583080 LINC00242Q5T6M2 205 aa9.53□□□□□ -0.88
SREBF1-221ENST00000583080 D6R8Y8 96 aa9.52□□□□□ -0.89
SREBF1-221ENST00000583080 SRP19P09132 144 aaKnown RBP9.52□□□□□ -0.89
SREBF1-221ENST00000583080 FAM74A3Q4VXF1 159 aa9.52□□□□□ -0.89
SREBF1-221ENST00000583080 S100A12P80511 92 aa9.51□□□□□ -0.89
SREBF1-221ENST00000583080 PACRGQ96M98 296 aaPredicted RBP9.51□□□□□ -0.89
SREBF1-221ENST00000583080 IGLV4-3A0A075B6K6 122 aa9.5□□□□□ -0.89
SREBF1-221ENST00000583080 TMEM218A2RU14 115 aa9.5□□□□□ -0.89
SREBF1-221ENST00000583080 LINC00469Q8N7U9 141 aa9.5□□□□□ -0.89
SREBF1-221ENST00000583080 CTDSP1Q9GZU7 261 aa9.5□□□□□ -0.89
SREBF1-221ENST00000583080 SMIM27A0A1W2PRY6 76 aa9.49□□□□□ -0.89
SREBF1-221ENST00000583080 NUPR1O60356 82 aa9.49□□□□□ -0.89
SREBF1-221ENST00000583080 IFI27P40305 119 aaPredicted RBP9.49□□□□□ -0.89
SREBF1-221ENST00000583080 RPL23P62829 140 aaKnown RBP9.49□□□□□ -0.89
SREBF1-221ENST00000583080 C22orf24Q9Y442 160 aa9.49□□□□□ -0.89
SREBF1-221ENST00000583080 APOC3P02656 99 aa9.48□□□□□ -0.89
SREBF1-221ENST00000583080 MRPL54Q6P161 138 aaKnown RBP9.48□□□□□ -0.89
SREBF1-221ENST00000583080 XAGE1AQ9HD64 81 aa9.48□□□□□ -0.89
SREBF1-221ENST00000583080 MUC17Q685J3 4493 aa9.48□□□□□ -0.89
SREBF1-221ENST00000583080 ADIRFQ15847 76 aa9.47□□□□□ -0.89
SREBF1-221ENST00000583080 ZC2HC1BQ5TFG8 222 aa9.47□□□□□ -0.89
SREBF1-221ENST00000583080 RETNLBQ9BQ08 111 aa9.47□□□□□ -0.89
SREBF1-221ENST00000583080 A0A1B0GW15 77 aa9.46□□□□□ -0.9
SREBF1-221ENST00000583080 TYMSOSQ8TAI1 123 aa9.46□□□□□ -0.9
SREBF1-221ENST00000583080 TMEM141Q96I45 108 aa9.46□□□□□ -0.9
SREBF1-221ENST00000583080 PYGO1Q9Y3Y4 419 aa9.46□□□□□ -0.9
SREBF1-221ENST00000583080 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
SREBF1-221ENST00000583080 ANAPC11Q9NYG5 84 aa9.45□□□□□ -0.9
SREBF1-221ENST00000583080 TOMM7Q9P0U1 55 aa9.45□□□□□ -0.9
SREBF1-221ENST00000583080 CRYGAP11844 174 aa9.44□□□□□ -0.9
SREBF1-221ENST00000583080 TEX43Q6ZNM6 134 aa9.44□□□□□ -0.9
SREBF1-221ENST00000583080 LINC00173Q6ZV60 143 aa9.44□□□□□ -0.9
SREBF1-221ENST00000583080 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
SREBF1-221ENST00000583080 C9JQL5 133 aa9.43□□□□□ -0.9
SREBF1-221ENST00000583080 BCE1O60756 84 aa9.43□□□□□ -0.9
SREBF1-221ENST00000583080 S100A8P05109 93 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms