RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	LEPROT	O15243	131 aa		5.24	□□□□□ -1.57
NF1-222	ENST00000582892	SLPI	P03973	132 aa		5.24	□□□□□ -1.57
NF1-222	ENST00000582892	CMC4	P56277	68 aa	Predicted RBP	5.24	□□□□□ -1.57
NF1-222	ENST00000582892	SLC25A29	Q8N8R3	303 aa		5.24	□□□□□ -1.57
NF1-222	ENST00000582892	PLEKHB2	Q96CS7	222 aa		5.24	□□□□□ -1.57
NF1-222	ENST00000582892	RNF183	Q96D59	192 aa		5.24	□□□□□ -1.57
NF1-222	ENST00000582892	APLN	Q9ULZ1	77 aa		5.24	□□□□□ -1.57
NF1-222	ENST00000582892	AGRN	O00468	2067 aa		5.24	□□□□□ -1.57
NF1-222	ENST00000582892		A0A0J9YY99	117 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	TMEM223	A0PJW6	202 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	INS	P01308	110 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892		P0DMU3	169 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	FAM231A	P0DMU4	169 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	FAM231C	P0DMU5	169 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	DEFB131A	P59861	70 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	RPL39	P62891	51 aa	Known RBP	5.23	□□□□□ -1.57
NF1-222	ENST00000582892	FAM74A4	Q5TZK3	123 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	SCGB1D4	Q6XE38	83 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	AMELX	Q99217	191 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	MAP6D1	Q9H9H5	199 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	SPANXA1	Q9NS26	97 aa		5.23	□□□□□ -1.57
NF1-222	ENST00000582892	RNF213	Q63HN8	5207 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	IGLV4-3	A0A075B6K6	122 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892		J3QQQ9	107 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892		J3QR89	54 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892		K7ERJ3	54 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	RS1	O15537	224 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	CDK2AP2	O75956	126 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	IGKV3-20	P01619	116 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	RBMY1A1	P0DJD3	496 aa	Known RBP	5.22	□□□□□ -1.57
NF1-222	ENST00000582892	RBMY1C	P0DJD4	496 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
NF1-222	ENST00000582892	DEFB114	Q30KQ6	69 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	TMEM61	Q8N0U2	210 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	ZNRF2	Q8NHG8	242 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	DYNLRB2	Q8TF09	96 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	VPS25	Q9BRG1	176 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	TIMM21	Q9BVV7	248 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	KRTAP9-8	Q9BYQ0	159 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	VCX2	Q9H322	139 aa		5.22	□□□□□ -1.57
NF1-222	ENST00000582892	KNCN	A6PVL3	124 aa		5.21	□□□□□ -1.58
NF1-222	ENST00000582892	IGHV3-53	P01767	116 aa		5.21	□□□□□ -1.58
NF1-222	ENST00000582892	ZNF22	P17026	224 aa	Predicted RBP	5.21	□□□□□ -1.58
NF1-222	ENST00000582892	LGALS3	P17931	250 aa	Known RBP	5.21	□□□□□ -1.58
NF1-222	ENST00000582892	PCP4	P48539	62 aa		5.21	□□□□□ -1.58
NF1-222	ENST00000582892	MRPS36	P82909	103 aa	Known RBP	5.21	□□□□□ -1.58
NF1-222	ENST00000582892	TMEM170B	Q5T4T1	132 aa		5.21	□□□□□ -1.58
NF1-222	ENST00000582892	C11orf72	Q8NBR9	251 aa		5.21	□□□□□ -1.58
NF1-222	ENST00000582892	ATP6V0E2	Q8NHE4	81 aa		5.21	□□□□□ -1.58
NF1-222	ENST00000582892	NAA38	Q9BRA0	125 aa	Known RBP	5.21	□□□□□ -1.58
NF1-222	ENST00000582892	TNFRSF18	Q9Y5U5	241 aa		5.21	□□□□□ -1.58
NF1-222	ENST00000582892	TRBV20-1	A0A075B6N2	111 aa		5.2	□□□□□ -1.58
NF1-222	ENST00000582892	TINCR	A0A1B0GVN0	87 aa		5.2	□□□□□ -1.58
NF1-222	ENST00000582892	DEFB4A	O15263	64 aa		5.2	□□□□□ -1.58
NF1-222	ENST00000582892	CIDEA	O60543	219 aa		5.2	□□□□□ -1.58
NF1-222	ENST00000582892	IGHV3-30	P01768	117 aa		5.2	□□□□□ -1.58
NF1-222	ENST00000582892	IGHV3-30-5	P0DP03	117 aa		5.2	□□□□□ -1.58
NF1-222	ENST00000582892	UBE2D3	P61077	147 aa		5.2	□□□□□ -1.58
NF1-222	ENST00000582892	UBE2D2	P62837	147 aa		5.2	□□□□□ -1.58
NF1-222	ENST00000582892	SMAGP	Q0VAQ4	97 aa		5.2	□□□□□ -1.58
NF1-222	ENST00000582892	CFAP126	Q5VTH2	177 aa		5.2	□□□□□ -1.58
NF1-222	ENST00000582892	NACA	E9PAV3	2078 aa		5.19	□□□□□ -1.58
NF1-222	ENST00000582892	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.19	□□□□□ -1.58
NF1-222	ENST00000582892		A0A0B4J2C4	111 aa		5.19	□□□□□ -1.58
NF1-222	ENST00000582892	TRBV10-1	A0A0K0K1A3	114 aa		5.19	□□□□□ -1.58
NF1-222	ENST00000582892	C16orf90	A8MZG2	172 aa		5.19	□□□□□ -1.58
NF1-222	ENST00000582892	TMEM238	C9JI98	176 aa		5.19	□□□□□ -1.58
NF1-222	ENST00000582892		M0QXV9	152 aa		5.19	□□□□□ -1.58
NF1-222	ENST00000582892	TSPEAR-AS2	P59090	65 aa		5.19	□□□□□ -1.58
NF1-222	ENST00000582892	RPL24	P83731	157 aa	Known RBP	5.19	□□□□□ -1.58
NF1-222	ENST00000582892	FAM19A3	Q7Z5A8	133 aa		5.19	□□□□□ -1.58
NF1-222	ENST00000582892	C10orf126	Q8N4M7	172 aa		5.19	□□□□□ -1.58
NF1-222	ENST00000582892	PRO0461	Q9UI25	63 aa		5.19	□□□□□ -1.58
NF1-222	ENST00000582892	TIMM17B	O60830	172 aa		5.18	□□□□□ -1.58
NF1-222	ENST00000582892	TSPAN13	O95857	204 aa		5.18	□□□□□ -1.58
NF1-222	ENST00000582892	TIRAP	P58753	221 aa		5.18	□□□□□ -1.58
NF1-222	ENST00000582892	FAM104A	Q969W3	186 aa		5.18	□□□□□ -1.58
NF1-222	ENST00000582892	LINC01587	Q99440	93 aa		5.18	□□□□□ -1.58
NF1-222	ENST00000582892	CHCHD7	Q9BUK0	85 aa		5.18	□□□□□ -1.58
NF1-222	ENST00000582892	MRPL16	Q9NX20	251 aa	Known RBP	5.18	□□□□□ -1.58
NF1-222	ENST00000582892	UBE2D4	Q9Y2X8	147 aa		5.18	□□□□□ -1.58
NF1-222	ENST00000582892	LRP1	Q07954	4544 aa	Known RBP	5.17	□□□□□ -1.58
NF1-222	ENST00000582892	IGLV5-45	A0A087WSX0	123 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	IGHV1-58	A0A0C4DH39	117 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892		A0A0J9YXV3	536 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892		A0A0J9YXY3	114 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892		H3BMG7	143 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	COTL1	Q14019	142 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	ODF3L2	Q3SX64	289 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	STH	Q8IWL8	128 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	C11orf45	Q8TAV5	145 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	LINC01600	Q96MT4	127 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	SPANXD	Q9BXN6	97 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	PPDPF	Q9H3Y8	114 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	SPANXC	Q9NY87	97 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	PRO1854	Q9UHT4	67 aa		5.17	□□□□□ -1.58
NF1-222	ENST00000582892	CSDC2	Q9Y534	153 aa	Known RBP	5.17	□□□□□ -1.58
NF1-222	ENST00000582892	TEX48	A0A1B0GUV7	120 aa		5.16	□□□□□ -1.58
NF1-222	ENST00000582892	CFC1B	P0CG36	223 aa		5.16	□□□□□ -1.58
NF1-222	ENST00000582892	CFC1	P0CG37	223 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms