RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 NTN5Q8WTR8 489 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-212ENST00000582788 ICOSQ9Y6W8 199 aa12.35□□□□□ -0.43
ERBB2-212ENST00000582788 IGHV3-38A0A0C4DH36 116 aa12.34□□□□□ -0.43
ERBB2-212ENST00000582788 TIMM17BO60830 172 aa12.34□□□□□ -0.43
ERBB2-212ENST00000582788 IGLV5-45A0A087WSX0 123 aa12.33□□□□□ -0.43
ERBB2-212ENST00000582788 NHLRC4P0CG21 123 aaPredicted RBP12.33□□□□□ -0.43
ERBB2-212ENST00000582788 NDUFV3P56181 108 aaKnown RBP12.33□□□□□ -0.43
ERBB2-212ENST00000582788 C9orf66Q5T8R8 295 aa12.33□□□□□ -0.43
ERBB2-212ENST00000582788 H3BT86 120 aa12.33□□□□□ -0.44
ERBB2-212ENST00000582788 FBN1P35555 2871 aaKnown RBP12.33□□□□□ -0.44
ERBB2-212ENST00000582788 TRAV8-4A0A0B4J246 113 aa12.32□□□□□ -0.44
ERBB2-212ENST00000582788 TIRAPP58753 221 aa12.32□□□□□ -0.44
ERBB2-212ENST00000582788 UBE2WQ96B02 151 aa12.32□□□□□ -0.44
ERBB2-212ENST00000582788 CDKN2A-AS1Q9UH64 79 aa12.32□□□□□ -0.44
ERBB2-212ENST00000582788 COX6CP09669 75 aa12.31□□□□□ -0.44
ERBB2-212ENST00000582788 IFITM1P13164 125 aa12.31□□□□□ -0.44
ERBB2-212ENST00000582788 FAM240AA0A1B0GVK7 77 aa12.3□□□□□ -0.44
ERBB2-212ENST00000582788 NDUFA1O15239 70 aa12.3□□□□□ -0.44
ERBB2-212ENST00000582788 TTC32Q5I0X7 151 aa12.3□□□□□ -0.44
ERBB2-212ENST00000582788 CSNK1G2-AS1Q8NCQ2 148 aa12.3□□□□□ -0.44
ERBB2-212ENST00000582788 IL17DQ8TAD2 202 aa12.3□□□□□ -0.44
ERBB2-212ENST00000582788 TRAV4A0A0B4J268 109 aa12.3□□□□□ -0.44
ERBB2-212ENST00000582788 NPC2P61916 151 aa12.3□□□□□ -0.44
ERBB2-212ENST00000582788 GAGE12JA6NER3 117 aa12.29□□□□□ -0.44
ERBB2-212ENST00000582788 GAGE7O76087 117 aa12.29□□□□□ -0.44
ERBB2-212ENST00000582788 GAGE12FP0CL80 117 aa12.29□□□□□ -0.44
ERBB2-212ENST00000582788 GAGE12GP0CL81 117 aa12.29□□□□□ -0.44
ERBB2-212ENST00000582788 GAGE12IP0CL82 117 aa12.29□□□□□ -0.44
ERBB2-212ENST00000582788 GAGE4Q13068 117 aa12.29□□□□□ -0.44
ERBB2-212ENST00000582788 KRTAP24-1Q3LI83 254 aa12.29□□□□□ -0.44
ERBB2-212ENST00000582788 TMEM101Q96IK0 257 aa12.29□□□□□ -0.44
ERBB2-212ENST00000582788 DEFB121Q5J5C9 76 aa12.28□□□□□ -0.44
ERBB2-212ENST00000582788 COL6A5A8TX70 2615 aa12.28□□□□□ -0.44
ERBB2-212ENST00000582788 TEX49A0A1B0GTD5 131 aa12.28□□□□□ -0.44
ERBB2-212ENST00000582788 C2orf82Q6UX34 121 aa12.28□□□□□ -0.44
ERBB2-212ENST00000582788 IGLV5-39A0A0G2JS06 123 aa12.27□□□□□ -0.44
ERBB2-212ENST00000582788 H7C423 109 aa12.27□□□□□ -0.44
ERBB2-212ENST00000582788 COX6A2Q02221 97 aa12.27□□□□□ -0.44
ERBB2-212ENST00000582788 MDFIQ99750 246 aa12.27□□□□□ -0.44
ERBB2-212ENST00000582788 TRRAPQ9Y4A5 3859 aa12.26□□□□□ -0.45
ERBB2-212ENST00000582788 DAND5Q8N907 189 aa12.26□□□□□ -0.45
ERBB2-212ENST00000582788 C15orf53Q8NAA6 179 aa12.26□□□□□ -0.45
ERBB2-212ENST00000582788 WFDC9Q8NEX5 89 aa12.26□□□□□ -0.45
ERBB2-212ENST00000582788 B5MCH6 92 aa12.25□□□□□ -0.45
ERBB2-212ENST00000582788 LST1O00453 97 aa12.25□□□□□ -0.45
ERBB2-212ENST00000582788 DGAT2L7PQ6IED9 249 aa12.25□□□□□ -0.45
ERBB2-212ENST00000582788 FAM19A3Q7Z5A8 133 aa12.25□□□□□ -0.45
ERBB2-212ENST00000582788 CLEC2BQ92478 149 aa12.25□□□□□ -0.45
ERBB2-212ENST00000582788 SS18L2Q9UHA2 77 aa12.25□□□□□ -0.45
ERBB2-212ENST00000582788 PLAC8L1A1L4L8 177 aa12.25□□□□□ -0.45
ERBB2-212ENST00000582788 HERVK_113P63121 156 aa12.25□□□□□ -0.45
ERBB2-212ENST00000582788 LINC00242Q5T6M2 205 aa12.25□□□□□ -0.45
ERBB2-212ENST00000582788 NOTCH3Q9UM47 2321 aa12.24□□□□□ -0.45
ERBB2-212ENST00000582788 TRGV1A0A0A0MS02 117 aa12.24□□□□□ -0.45
ERBB2-212ENST00000582788 LINC00694P0DN24 101 aa12.23□□□□□ -0.45
ERBB2-212ENST00000582788 Q6ZTI0 123 aa12.23□□□□□ -0.45
ERBB2-212ENST00000582788 C16orf74Q96GX8 76 aa12.23□□□□□ -0.45
ERBB2-212ENST00000582788 LINC00308Q8TCZ7 52 aa12.22□□□□□ -0.45
ERBB2-212ENST00000582788 Q9H8V8 135 aa12.22□□□□□ -0.45
ERBB2-212ENST00000582788 NOP10Q9NPE3 64 aaKnown RBP12.22□□□□□ -0.45
ERBB2-212ENST00000582788 SMIM1B2RUZ4 78 aa12.21□□□□□ -0.45
ERBB2-212ENST00000582788 DAZ2Q13117 558 aaKnown RBP12.21□□□□□ -0.45
ERBB2-212ENST00000582788 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.45
ERBB2-212ENST00000582788 CSDC2Q9Y534 153 aaKnown RBP12.21□□□□□ -0.45
ERBB2-212ENST00000582788 TRBV10-1A0A0K0K1A3 114 aa12.2□□□□□ -0.46
ERBB2-212ENST00000582788 K7EQD1 137 aa12.2□□□□□ -0.46
ERBB2-212ENST00000582788 NTM-AS1Q6ZSK4 140 aa12.2□□□□□ -0.46
ERBB2-212ENST00000582788 WIPF1O43516 503 aa12.2□□□□□ -0.46
ERBB2-212ENST00000582788 RPL36AP83881 106 aaKnown RBP12.2□□□□□ -0.46
ERBB2-212ENST00000582788 RPL36ALQ969Q0 106 aaKnown RBP12.2□□□□□ -0.46
ERBB2-212ENST00000582788 DNHD1Q96M86 4753 aa12.19□□□□□ -0.46
ERBB2-212ENST00000582788 TRBV7-7A0A0K0K1E9 115 aa12.19□□□□□ -0.46
ERBB2-212ENST00000582788 ACYP1P07311 99 aa12.18□□□□□ -0.46
ERBB2-212ENST00000582788 DAZ4Q86SG3 579 aaKnown RBP12.18□□□□□ -0.46
ERBB2-212ENST00000582788 DAZ3Q9NR90 486 aaKnown RBP12.18□□□□□ -0.46
ERBB2-212ENST00000582788 CCDC179H3BU77 68 aa12.18□□□□□ -0.46
ERBB2-212ENST00000582788 SOSTDC1Q6X4U4 206 aa12.18□□□□□ -0.46
ERBB2-212ENST00000582788 ZNF625Q96I27 306 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-212ENST00000582788 OVOL2Q9BRP0 275 aa12.18□□□□□ -0.46
ERBB2-212ENST00000582788 F5H768 121 aa12.17□□□□□ -0.46
ERBB2-212ENST00000582788 TRAV13-1A0A0B4J241 112 aa12.16□□□□□ -0.46
ERBB2-212ENST00000582788 IMUPQ9GZP8 106 aa12.16□□□□□ -0.46
ERBB2-212ENST00000582788 CDC42SE2Q9NRR3 84 aa12.16□□□□□ -0.46
ERBB2-212ENST00000582788 STAB1Q9NY15 2570 aa12.16□□□□□ -0.46
ERBB2-212ENST00000582788 COPS9Q8WXC6 57 aa12.16□□□□□ -0.46
ERBB2-212ENST00000582788 C3orf56Q8N813 242 aa12.15□□□□□ -0.46
ERBB2-212ENST00000582788 SHISA2Q6UWI4 295 aa12.15□□□□□ -0.47
ERBB2-212ENST00000582788 X6R8D5 127 aa12.15□□□□□ -0.47
ERBB2-212ENST00000582788 A0A0U1RRA0 63 aa12.14□□□□□ -0.47
ERBB2-212ENST00000582788 COX7A2LO14548 114 aa12.14□□□□□ -0.47
ERBB2-212ENST00000582788 ANK2Q01484 3957 aa12.13□□□□□ -0.47
ERBB2-212ENST00000582788 TRGV2A0A075B6R0 118 aa12.13□□□□□ -0.47
ERBB2-212ENST00000582788 HERV-K104P63124 156 aa12.13□□□□□ -0.47
ERBB2-212ENST00000582788 OXLD1Q5BKU9 147 aa12.13□□□□□ -0.47
ERBB2-212ENST00000582788 PPDPFQ9H3Y8 114 aa12.13□□□□□ -0.47
ERBB2-212ENST00000582788 MEIG1Q5JSS6 88 aa12.12□□□□□ -0.47
ERBB2-212ENST00000582788 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
ERBB2-212ENST00000582788 TMEM243Q9BU79 118 aa12.11□□□□□ -0.47
ERBB2-212ENST00000582788 APOC4P55056 127 aa12.1□□□□□ -0.47
ERBB2-212ENST00000582788 DEFB135Q30KP9 77 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms