RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 LINC00469Q8N7U9 141 aa5.08□□□□□ -1.6
GGA3-212ENST00000582376 MARVELD1Q9BSK0 173 aa5.08□□□□□ -1.6
GGA3-212ENST00000582376 ST20Q9HBF5 79 aa5.08□□□□□ -1.6
GGA3-212ENST00000582376 USH2AO75445 5202 aa5.08□□□□□ -1.6
GGA3-212ENST00000582376 RPL37AP8A6NKH3 93 aa5.07□□□□□ -1.6
GGA3-212ENST00000582376 ZNF727A8MUV8 499 aa5.07□□□□□ -1.6
GGA3-212ENST00000582376 KRTAP4-16G5E9R7 235 aaPredicted RBP5.07□□□□□ -1.6
GGA3-212ENST00000582376 PFDN1O60925 122 aa5.07□□□□□ -1.6
GGA3-212ENST00000582376 UPK1BO75841 260 aa5.07□□□□□ -1.6
GGA3-212ENST00000582376 PCOTHQ58A44 107 aa5.07□□□□□ -1.6
GGA3-212ENST00000582376 C2orf82Q6UX34 121 aa5.07□□□□□ -1.6
GGA3-212ENST00000582376 TMUB2Q71RG4 321 aa5.07□□□□□ -1.6
GGA3-212ENST00000582376 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
GGA3-212ENST00000582376 CNFNQ9BYD5 112 aa5.07□□□□□ -1.6
GGA3-212ENST00000582376 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
GGA3-212ENST00000582376 COX6B2Q6YFQ2 88 aa5.06□□□□□ -1.6
GGA3-212ENST00000582376 LINC00167Q96N53 147 aa5.06□□□□□ -1.6
GGA3-212ENST00000582376 XAGE1AQ9HD64 81 aa5.06□□□□□ -1.6
GGA3-212ENST00000582376 RAB19A4D1S5 217 aa5.05□□□□□ -1.6
GGA3-212ENST00000582376 SSNA1O43805 119 aa5.05□□□□□ -1.6
GGA3-212ENST00000582376 CFC1P0CG37 223 aa5.05□□□□□ -1.6
GGA3-212ENST00000582376 FCER1GP30273 86 aa5.05□□□□□ -1.6
GGA3-212ENST00000582376 RPL35P42766 123 aaKnown RBP5.05□□□□□ -1.6
GGA3-212ENST00000582376 POLR2KP53803 58 aaKnown RBP5.05□□□□□ -1.6
GGA3-212ENST00000582376 RPL7L1Q6DKI1 246 aaKnown RBP5.05□□□□□ -1.6
GGA3-212ENST00000582376 BORCS7-ASMTA0A0B4J1R7 106 aa5.04□□□□□ -1.6
GGA3-212ENST00000582376 TRBV27A0A0K0K1C4 114 aa5.04□□□□□ -1.6
GGA3-212ENST00000582376 FAM19A2Q8N3H0 131 aa5.04□□□□□ -1.6
GGA3-212ENST00000582376 TGIF2-C20orf24A0A0A6YYL0 155 aa5.03□□□□□ -1.6
GGA3-212ENST00000582376 GAGE10A6NGK3 116 aa5.03□□□□□ -1.6
GGA3-212ENST00000582376 SPINK1P00995 79 aa5.03□□□□□ -1.6
GGA3-212ENST00000582376 CENPWQ5EE01 88 aa5.03□□□□□ -1.6
GGA3-212ENST00000582376 Q8NBF4 154 aa5.03□□□□□ -1.6
GGA3-212ENST00000582376 ENKURQ8TC29 256 aa5.03□□□□□ -1.6
GGA3-212ENST00000582376 TMEM18Q96B42 140 aa5.03□□□□□ -1.6
GGA3-212ENST00000582376 TIMM21Q9BVV7 248 aa5.03□□□□□ -1.6
GGA3-212ENST00000582376 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
GGA3-212ENST00000582376 PRLHP81277 87 aa5.02□□□□□ -1.61
GGA3-212ENST00000582376 PNRC1Q12796 327 aaPredicted RBP5.02□□□□□ -1.61
GGA3-212ENST00000582376 VCYO14598 125 aa5.01□□□□□ -1.61
GGA3-212ENST00000582376 RPL32P62910 135 aaKnown RBP5.01□□□□□ -1.61
GGA3-212ENST00000582376 PLEKHB2Q96CS7 222 aa5.01□□□□□ -1.61
GGA3-212ENST00000582376 A0A1B0GV50 99 aa5□□□□□ -1.61
GGA3-212ENST00000582376 IFITM10A6NMD0 228 aa5□□□□□ -1.61
GGA3-212ENST00000582376 GNG4P50150 75 aa5□□□□□ -1.61
GGA3-212ENST00000582376 HBBP68871 147 aa5□□□□□ -1.61
GGA3-212ENST00000582376 FAM19A1Q7Z5A9 133 aa5□□□□□ -1.61
GGA3-212ENST00000582376 SMIM12Q96EX1 92 aa5□□□□□ -1.61
GGA3-212ENST00000582376 BIN3Q9NQY0 253 aa5□□□□□ -1.61
GGA3-212ENST00000582376 CKS1BP61024 79 aa4.99□□□□□ -1.61
GGA3-212ENST00000582376 Q8N377 158 aa4.99□□□□□ -1.61
GGA3-212ENST00000582376 KCNRGQ8N5I3 272 aa4.99□□□□□ -1.61
GGA3-212ENST00000582376 NUDT10Q8NFP7 164 aa4.99□□□□□ -1.61
GGA3-212ENST00000582376 SFT2D1Q8WV19 159 aa4.99□□□□□ -1.61
GGA3-212ENST00000582376 C11orf52Q96A22 123 aa4.99□□□□□ -1.61
GGA3-212ENST00000582376 NUDT11Q96G61 164 aa4.99□□□□□ -1.61
GGA3-212ENST00000582376 PRSS2P07478 247 aa4.98□□□□□ -1.61
GGA3-212ENST00000582376 FAM104AQ969W3 186 aa4.98□□□□□ -1.61
GGA3-212ENST00000582376 GNB1LQ9BYB4 327 aa4.98□□□□□ -1.61
GGA3-212ENST00000582376 FLGP20930 4061 aaPredicted RBP4.98□□□□□ -1.61
GGA3-212ENST00000582376 IGKV2-28A0A075B6P5 120 aa4.97□□□□□ -1.61
GGA3-212ENST00000582376 SLC25A20O43772 301 aa4.97□□□□□ -1.61
GGA3-212ENST00000582376 IGKV2D-28P01615 120 aa4.97□□□□□ -1.61
GGA3-212ENST00000582376 RPS29P62273 56 aaKnown RBP4.97□□□□□ -1.61
GGA3-212ENST00000582376 CCL20P78556 96 aa4.97□□□□□ -1.61
GGA3-212ENST00000582376 MRPS36P82909 103 aaKnown RBP4.97□□□□□ -1.61
GGA3-212ENST00000582376 KRTAP6-3Q3LI67 103 aa4.97□□□□□ -1.61
GGA3-212ENST00000582376 CBLN2Q8IUK8 224 aa4.97□□□□□ -1.61
GGA3-212ENST00000582376 NKAPP1Q8N9T2 125 aa4.97□□□□□ -1.61
GGA3-212ENST00000582376 MBD3L1Q8WWY6 194 aa4.97□□□□□ -1.61
GGA3-212ENST00000582376 TOMM7Q9P0U1 55 aa4.97□□□□□ -1.61
GGA3-212ENST00000582376 IGLV5-37A0A075B6J1 123 aa4.96□□□□□ -1.62
GGA3-212ENST00000582376 SUMO2P61956 95 aaKnown RBP4.96□□□□□ -1.62
GGA3-212ENST00000582376 RPL39P62891 51 aaKnown RBP4.96□□□□□ -1.62
GGA3-212ENST00000582376 C6orf226Q5I0X4 101 aa4.96□□□□□ -1.62
GGA3-212ENST00000582376 LINC01561Q8N1V8 128 aa4.96□□□□□ -1.62
GGA3-212ENST00000582376 SPRR4Q96PI1 79 aa4.96□□□□□ -1.62
GGA3-212ENST00000582376 SPANXA1Q9NS26 97 aa4.96□□□□□ -1.62
GGA3-212ENST00000582376 TRBV20OR9-2A0A075B6H5 130 aa4.95□□□□□ -1.62
GGA3-212ENST00000582376 RAB4AP20338 218 aa4.95□□□□□ -1.62
GGA3-212ENST00000582376 FAM213BQ8TBF2 198 aa4.95□□□□□ -1.62
GGA3-212ENST00000582376 HIGD2AQ9BW72 106 aa4.95□□□□□ -1.62
GGA3-212ENST00000582376 SMKR1H3BMG3 65 aa4.94□□□□□ -1.62
GGA3-212ENST00000582376 PPP1R17O96001 155 aa4.94□□□□□ -1.62
GGA3-212ENST00000582376 Q8IZM0 81 aa4.94□□□□□ -1.62
GGA3-212ENST00000582376 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
GGA3-212ENST00000582376 TMEM126AQ9H061 195 aa4.94□□□□□ -1.62
GGA3-212ENST00000582376 TMEM191AQ9H0A3 160 aa4.94□□□□□ -1.62
GGA3-212ENST00000582376 LINC00846Q9NV44 126 aa4.94□□□□□ -1.62
GGA3-212ENST00000582376 ZNF706Q9Y5V0 76 aaPredicted RBP4.94□□□□□ -1.62
GGA3-212ENST00000582376 TMEM238C9JI98 176 aa4.93□□□□□ -1.62
GGA3-212ENST00000582376 F8VRH5 84 aa4.93□□□□□ -1.62
GGA3-212ENST00000582376 PPP1R2P9O14990 202 aa4.93□□□□□ -1.62
GGA3-212ENST00000582376 SCO1O75880 301 aa4.93□□□□□ -1.62
GGA3-212ENST00000582376 Q5BKY6 102 aa4.93□□□□□ -1.62
GGA3-212ENST00000582376 Q6ZN92 141 aa4.93□□□□□ -1.62
GGA3-212ENST00000582376 AMN1Q8IY45 258 aa4.93□□□□□ -1.62
GGA3-212ENST00000582376 BORCS7Q96B45 105 aa4.93□□□□□ -1.62
GGA3-212ENST00000582376 MANBALQ9NQG1 85 aa4.93□□□□□ -1.62
GGA3-212ENST00000582376 FXYD6-FXYD2A0A087WZ82 144 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms