RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 M0R3E3 92 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 APOC3P02656 99 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 MRPS10P82664 201 aaKnown RBP-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 Q5VSD8 79 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 SFTA2Q6UW10 78 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 SPCS1Q9Y6A9 102 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 ARL2-SNX15V9GYD0 113 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 SPHKAPQ2M3C7 1700 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 ALMS1Q8TCU4 4167 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 ZFYVE16Q7Z3T8 1539 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 FAM135AQ9P2D6 1515 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 WNK3Q9BYP7 1800 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 USF3Q68DE3 2245 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 MUC2Q02817 5179 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 NHSL1Q5SYE7 1610 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 SHANK2Q9UPX8 1470 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 ANKRD17O75179 2603 aaKnown RBP-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 hADV29S1A0JD25 119 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 TMEM262E9PQX1 116 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 C10orf113Q5VZT2 155 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 DEFB123Q8N688 67 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 TMEM263Q8WUH6 116 aaKnown RBP-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 MANBALQ9NQG1 85 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 SPTBN1Q01082 2364 aaKnown RBP-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 GOLGA4Q13439 2230 aaKnown RBP-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 TULP4Q9NRJ4 1543 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 RAPGEF6Q8TEU7 1601 aa-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 DSTQ03001 7570 aaKnown RBP-0.09□□□□□ -2.42
TTC39C-207ENST00000581394 MRC2Q9UBG0 1479 aa-0.1□□□□□ -2.42
TTC39C-207ENST00000581394 NEBP20929 6669 aa-0.1□□□□□ -2.42
TTC39C-207ENST00000581394 PEG3Q9GZU2 1588 aa-0.1□□□□□ -2.42
TTC39C-207ENST00000581394 KDM5AP29375 1690 aaKnown RBP-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 C20orf202A1L168 122 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 FAM223BA6NKX1 122 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 S100PP25815 95 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 SPRR1AP35321 89 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 SNCAP37840 140 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 LCN9Q8WX39 176 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 CGREF1Q99674 301 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 UQCR10Q9UDW1 63 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 PRO1854Q9UHT4 67 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 PKDREJQ9NTG1 2253 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 PAPPAQ13219 1627 aa-0.1□□□□□ -2.43
TTC39C-207ENST00000581394 DIP2CQ9Y2E4 1556 aa-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 MYO7BQ6PIF6 2116 aa-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 KMT2CQ8NEZ4 4911 aaKnown RBP-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 CC2D2AQ9P2K1 1620 aa-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 TRBV6-1A0A0K0K1D8 114 aa-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 PRM1P04553 51 aa-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 MGPP08493 103 aa-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 BSNQ9UPA5 3926 aa-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 SBF2Q86WG5 1849 aa-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 PPRC1Q5VV67 1664 aaKnown RBP-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 LRP2P98164 4655 aa-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 TENM4Q6N022 2769 aa-0.11□□□□□ -2.43
TTC39C-207ENST00000581394 PCLOQ9Y6V0 5065 aa-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 VWFP04275 2813 aa-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 PTPN13Q12923 2485 aa-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 PIEZO2Q9H5I5 2752 aa-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 LINC00959A0A1B0GUT2 108 aa-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 NAP1L6A6NFF2 107 aa-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 ATP6V1G2-DDX39BF2Z307 99 aa-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 DEFB109BQ30KR1 87 aa-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 LINC01600Q96MT4 127 aa-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 PRKDCP78527 4128 aaKnown RBP-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 MAGI1Q96QZ7 1491 aaPredicted RBP-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 RYR1P21817 5038 aa-0.12□□□□□ -2.43
TTC39C-207ENST00000581394 CFDP00746 253 aaPredicted RBP-0.13□□□□□ -2.43
TTC39C-207ENST00000581394 MT-ATP8P03928 68 aa-0.13□□□□□ -2.43
TTC39C-207ENST00000581394 COX6CP09669 75 aa-0.13□□□□□ -2.43
TTC39C-207ENST00000581394 WHAMMP3Q1A5X7 153 aa-0.13□□□□□ -2.43
TTC39C-207ENST00000581394 GTF2H5Q6ZYL4 71 aa-0.13□□□□□ -2.43
TTC39C-207ENST00000581394 C12orf57Q99622 126 aa-0.13□□□□□ -2.43
TTC39C-207ENST00000581394 FLNCQ14315 2725 aa-0.13□□□□□ -2.43
TTC39C-207ENST00000581394 SCN7AQ01118 1682 aa-0.14□□□□□ -2.43
TTC39C-207ENST00000581394 NSD1Q96L73 2696 aaPredicted RBP-0.14□□□□□ -2.43
TTC39C-207ENST00000581394 C1orf167Q5SNV9 1468 aa-0.14□□□□□ -2.43
TTC39C-207ENST00000581394 RNF213Q63HN8 5207 aa-0.14□□□□□ -2.43
TTC39C-207ENST00000581394 SPRR1BP22528 89 aa-0.14□□□□□ -2.43
TTC39C-207ENST00000581394 SEC11AP67812 179 aa-0.14□□□□□ -2.43
TTC39C-207ENST00000581394 ARHGEF12Q9NZN5 1544 aa-0.14□□□□□ -2.43
TTC39C-207ENST00000581394 BTAF1O14981 1849 aa-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 CRYM-AS1A6NIL9 109 aa-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 MPC2O95563 127 aa-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 TRAPPC2P0DI81 140 aa-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 TRAPPC2BP0DI82 140 aa-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 S100A3P33764 101 aa-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 UBA52P62987 128 aaKnown RBP-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 LINC00846Q9NV44 126 aa-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 FAIMQ9NVQ4 179 aa-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 PRDM15P57071 1507 aaPredicted RBP-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 USH2AO75445 5202 aa-0.15□□□□□ -2.43
TTC39C-207ENST00000581394 TRAV30A0A087WSZ9 112 aa-0.16□□□□□ -2.44
TTC39C-207ENST00000581394 TMEM218A2RU14 115 aa-0.16□□□□□ -2.44
TTC39C-207ENST00000581394 H7BZZ5 65 aa-0.16□□□□□ -2.44
TTC39C-207ENST00000581394 SAA2P0DJI9 122 aaPredicted RBP-0.16□□□□□ -2.44
TTC39C-207ENST00000581394 SPRR2DP22532 72 aa-0.16□□□□□ -2.44
TTC39C-207ENST00000581394 PIGYQ3MUY2 71 aa-0.16□□□□□ -2.44
TTC39C-207ENST00000581394 HECTD4Q9Y4D8 3996 aa-0.16□□□□□ -2.44
TTC39C-207ENST00000581394 RYR2Q92736 4967 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms