RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 DNAJC13O75165 2243 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 IQCF6A8MYZ5 107 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 M0QZK8 103 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 M0R135 149 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 NPFFO15130 113 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 LYRM1O43325 122 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 EDF1O60869 148 aaKnown RBP0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 CD14P08571 375 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 FABP4P15090 132 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 SRP9P49458 86 aaKnown RBP0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 NDUFA6P56556 154 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 VMA21Q3ZAQ7 101 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 HAGHLQ6PII5 290 aaPredicted RBP0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 C10orf82Q8WW14 230 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 LZICQ8WZA0 190 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 LEAP2Q969E1 77 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 PRELID3AQ96N28 172 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 TMEM138Q9NPI0 162 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 SAR1AQ9NR31 198 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 TPRKBQ9Y3C4 175 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 HSPB11Q9Y547 144 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 DNAH7Q8WXX0 4024 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 VWFP04275 2813 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 HERC1Q15751 4861 aa0.97□□□□□ -2.25
SMCHD1-205ENST00000581383 HMCN2Q8NDA2 5059 aa0.96□□□□□ -2.25
SMCHD1-205ENST00000581383 ABCA1O95477 2261 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 MACF1Q9UPN3 7388 aaKnown RBP0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 DNAH2Q9P225 4427 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 TRAV13-1A0A0B4J241 112 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 J3KT08 172 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 COX4I1P13073 169 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 COX7CP15954 63 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 EDDM3BP56851 147 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 PCBD1P61457 104 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 BLCAPP62952 87 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 CIRBPQ14011 172 aaKnown RBP0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 DIAPH2-AS1Q14236 149 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 DEFB121Q5J5C9 76 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 LINC01590Q5TEZ4 76 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 OR4B1Q8NGF8 309 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 OR8J3Q8NGG0 315 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 OR10AC1Q8NH08 325 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 ZNF431Q8TF32 576 aaPredicted RBP0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 BRK1Q8WUW1 75 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 CLEC2BQ92478 149 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 OR4C12Q96R67 309 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 FKBP11Q9NYL4 201 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 HILPDAQ9Y5L2 63 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 CADP27708 2225 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 APOBP04114 4563 aaKnown RBP0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 HECTD4Q9Y4D8 3996 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 FAT2Q9NYQ8 4349 aa0.96□□□□□ -2.26
SMCHD1-205ENST00000581383 TENM3Q9P273 2699 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 VPS13DQ5THJ4 4388 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 TRBV7-6A0A0J9YX20 115 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 TRBV27A0A0K0K1C4 114 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 LOC107986453A0A1B0GWG9 222 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 BBIP1A8MTZ0 92 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 GUCA1AP43080 201 aaPredicted RBP0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 GNGT1P63211 74 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 SELENOWP63302 87 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 PIGYQ3MUY2 71 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 SLC25A26Q70HW3 274 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 NDUFA11Q86Y39 141 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 DEFB107AQ8IZN7 70 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 OR4S1Q8NGB4 309 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 OR51A4Q8NGJ6 313 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 PYDC1Q8WXC3 89 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 SPTSSAQ969W0 71 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 LYSTQ99698 3801 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 WFDC10AQ9H1F0 79 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 DNAH5Q8TE73 4624 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 FREM3P0C091 2139 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 LRP1BQ9NZR2 4599 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 MYCBP2O75592 4640 aa0.95□□□□□ -2.26
SMCHD1-205ENST00000581383 CSMD3Q7Z407 3707 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 NINQ8N4C6 2090 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 PNMA8CA0A1B0GUJ8 204 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 G3V318 75 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 H3BMG7 143 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 M0R1W7 72 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 OR2H2O95918 312 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 IGF2P01344 180 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 IFNGP01579 166 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 APELAP0DMC3 54 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 FOXA3P55318 350 aaPredicted RBP0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 MRPS36P82909 103 aaKnown RBP0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 SMIM21Q3B7S5 101 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 XAF1Q6GPH4 301 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 FOXI2Q6ZQN5 318 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 SBSPONQ8IVN8 264 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 LINC00269Q8N2A0 174 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 C5orf56Q8N8D9 126 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 TMEM229BQ8NBD8 167 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 OTOSQ8NHW6 89 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 FAM103A1Q9BTL3 118 aaKnown RBP0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 CMC2Q9NRP2 79 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 KAAG1Q9UBP8 84 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 GNG8Q9UK08 70 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms