RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 DAZ4Q86SG3 579 aaKnown RBP5.52□□□□□ -1.53
RFFL-207ENST00000580569 RPL36ALQ969Q0 106 aaKnown RBP5.52□□□□□ -1.53
RFFL-207ENST00000580569 PLEKHB2Q96CS7 222 aa5.52□□□□□ -1.53
RFFL-207ENST00000580569 GTSF1LQ9H1H1 148 aa5.52□□□□□ -1.53
RFFL-207ENST00000580569 VCX2Q9H322 139 aa5.52□□□□□ -1.53
RFFL-207ENST00000580569 DAZ3Q9NR90 486 aaKnown RBP5.52□□□□□ -1.53
RFFL-207ENST00000580569 CSDC2Q9Y534 153 aaKnown RBP5.52□□□□□ -1.53
RFFL-207ENST00000580569 LOC100131303A0A0U1RQF7 123 aa5.51□□□□□ -1.53
RFFL-207ENST00000580569 TINCRA0A1B0GVN0 87 aa5.51□□□□□ -1.53
RFFL-207ENST00000580569 UBE2D1P51668 147 aa5.51□□□□□ -1.53
RFFL-207ENST00000580569 Q6ZUT4 128 aa5.51□□□□□ -1.53
RFFL-207ENST00000580569 CEND1Q8N111 149 aa5.51□□□□□ -1.53
RFFL-207ENST00000580569 OR5A1Q8NGJ0 315 aa5.51□□□□□ -1.53
RFFL-207ENST00000580569 DNAH10Q8IVF4 4471 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 TRGV2A0A075B6R0 118 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 IGLV5-45A0A087WSX0 123 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 GAGE12JA6NER3 117 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 K7EP13 123 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 LEPROTO15243 131 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 HERVK_113P61574 105 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 GAGE4Q13068 117 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 GAGE5Q13069 117 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 TMEM170BQ5T4T1 132 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 TM2D3Q9BRN9 247 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 KIAA1109Q2LD37 5005 aa5.5□□□□□ -1.53
RFFL-207ENST00000580569 A0A0J9YY99 117 aa5.49□□□□□ -1.53
RFFL-207ENST00000580569 A0A1B0GWB2 263 aa5.49□□□□□ -1.53
RFFL-207ENST00000580569 A6NDN8 102 aa5.49□□□□□ -1.53
RFFL-207ENST00000580569 ZNF815PA8K554 130 aa5.49□□□□□ -1.53
RFFL-207ENST00000580569 H7C423 109 aa5.49□□□□□ -1.53
RFFL-207ENST00000580569 J3QQQ9 107 aa5.49□□□□□ -1.53
RFFL-207ENST00000580569 RNASE13Q5GAN3 156 aaKnown RBP5.49□□□□□ -1.53
RFFL-207ENST00000580569 Q8NAQ8 132 aa5.49□□□□□ -1.53
RFFL-207ENST00000580569 SPANXB1Q9NS25 103 aaPredicted RBP5.49□□□□□ -1.53
RFFL-207ENST00000580569 TRGV4A0A0C4DH28 118 aa5.48□□□□□ -1.53
RFFL-207ENST00000580569 LYRM9A8MSI8 78 aa5.48□□□□□ -1.53
RFFL-207ENST00000580569 APOC4P55056 127 aa5.48□□□□□ -1.53
RFFL-207ENST00000580569 UBE2V1Q13404 147 aa5.48□□□□□ -1.53
RFFL-207ENST00000580569 CDC42SE2Q9NRR3 84 aa5.48□□□□□ -1.53
RFFL-207ENST00000580569 IGHV1-58A0A0C4DH39 117 aa5.47□□□□□ -1.53
RFFL-207ENST00000580569 CCL25O15444 150 aa5.47□□□□□ -1.53
RFFL-207ENST00000580569 IGHV3-30-3P0DP02 117 aa5.47□□□□□ -1.53
RFFL-207ENST00000580569 IGHV4-30-4P0DP06 118 aa5.47□□□□□ -1.53
RFFL-207ENST00000580569 COX6A2Q02221 97 aa5.47□□□□□ -1.53
RFFL-207ENST00000580569 DEFB135Q30KP9 77 aa5.47□□□□□ -1.53
RFFL-207ENST00000580569 FAM222AQ5U5X8 452 aa5.47□□□□□ -1.53
RFFL-207ENST00000580569 TRBV6-8A0A0A6YYG3 113 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 TRAV8-3A0A0A6YYJ7 113 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 IGHV4-28A0A0C4DH34 117 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 SMIM13P0DJ93 91 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 MIFP14174 115 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 FOXI1Q12951 378 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 C12orf74Q32Q52 190 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 LINC00242Q5T6M2 205 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 AMMECR1LQ6DCA0 310 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 C10orf126Q8N4M7 172 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 LINC00476Q8WZB0 136 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 VSIG2Q96IQ7 327 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 HIST1H4GQ99525 98 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 TMEM243Q9BU79 118 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 CDKN2A-AS1Q9UH64 79 aa5.46□□□□□ -1.54
RFFL-207ENST00000580569 IGLV5-39A0A0G2JS06 123 aa5.45□□□□□ -1.54
RFFL-207ENST00000580569 IGHV3-30P01768 117 aa5.45□□□□□ -1.54
RFFL-207ENST00000580569 IGHV3-30-5P0DP03 117 aa5.45□□□□□ -1.54
RFFL-207ENST00000580569 DEFB130BP0DP73 79 aa5.45□□□□□ -1.54
RFFL-207ENST00000580569 DEFB130AP0DP74 79 aa5.45□□□□□ -1.54
RFFL-207ENST00000580569 LGALS3P17931 250 aaKnown RBP5.45□□□□□ -1.54
RFFL-207ENST00000580569 SMAGPQ0VAQ4 97 aa5.45□□□□□ -1.54
RFFL-207ENST00000580569 LITAFQ99732 161 aa5.45□□□□□ -1.54
RFFL-207ENST00000580569 PRO0255Q9UI72 69 aa5.45□□□□□ -1.54
RFFL-207ENST00000580569 CELA1Q9UNI1 258 aa5.45□□□□□ -1.54
RFFL-207ENST00000580569 IGHV3-64A0A075B6Q5 118 aa5.44□□□□□ -1.54
RFFL-207ENST00000580569 A0A0J9YXY3 114 aa5.44□□□□□ -1.54
RFFL-207ENST00000580569 F5H768 121 aa5.44□□□□□ -1.54
RFFL-207ENST00000580569 K7ERJ3 54 aa5.44□□□□□ -1.54
RFFL-207ENST00000580569 HERVK_113P63121 156 aa5.44□□□□□ -1.54
RFFL-207ENST00000580569 RAB37Q96AX2 223 aa5.44□□□□□ -1.54
RFFL-207ENST00000580569 TMEM101Q96IK0 257 aa5.44□□□□□ -1.54
RFFL-207ENST00000580569 NHP2Q9NX24 153 aaKnown RBP5.44□□□□□ -1.54
RFFL-207ENST00000580569 IGLV4-60A0A075B6I1 120 aa5.43□□□□□ -1.54
RFFL-207ENST00000580569 A0A1W2PPM0 123 aa5.43□□□□□ -1.54
RFFL-207ENST00000580569 IGLL5B9A064 214 aa5.43□□□□□ -1.54
RFFL-207ENST00000580569 H3BUT2 72 aa5.43□□□□□ -1.54
RFFL-207ENST00000580569 SPINK8P0C7L1 97 aa5.43□□□□□ -1.54
RFFL-207ENST00000580569 VAMP3Q15836 100 aa5.43□□□□□ -1.54
RFFL-207ENST00000580569 SCGB1D4Q6XE38 83 aa5.43□□□□□ -1.54
RFFL-207ENST00000580569 ATP6V0E2Q8NHE4 81 aa5.43□□□□□ -1.54
RFFL-207ENST00000580569 GEMIN7Q9H840 131 aaKnown RBP5.43□□□□□ -1.54
RFFL-207ENST00000580569 VPS13DQ5THJ4 4388 aa5.43□□□□□ -1.54
RFFL-207ENST00000580569 DNAH6Q9C0G6 4158 aa5.42□□□□□ -1.54
RFFL-207ENST00000580569 PKHD1P08F94 4074 aa5.42□□□□□ -1.54
RFFL-207ENST00000580569 A0A1B0GUV1 79 aa5.42□□□□□ -1.54
RFFL-207ENST00000580569 SMIM1B2RUZ4 78 aa5.42□□□□□ -1.54
RFFL-207ENST00000580569 K7EP34 96 aa5.42□□□□□ -1.54
RFFL-207ENST00000580569 DEFB4AO15263 64 aa5.42□□□□□ -1.54
RFFL-207ENST00000580569 GAGE6Q13070 117 aa5.42□□□□□ -1.54
RFFL-207ENST00000580569 NAA38Q9BRA0 125 aaKnown RBP5.42□□□□□ -1.54
RFFL-207ENST00000580569 SPANXDQ9BXN6 97 aa5.42□□□□□ -1.54
RFFL-207ENST00000580569 SPANXCQ9NY87 97 aa5.42□□□□□ -1.54
RFFL-207ENST00000580569 UBE2L6O14933 153 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms