RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 KIR2DL4Q99706 377 aa7.6□□□□□ -1.19
CSNK1D-213ENST00000580446 CYTL1Q9NRR1 136 aa7.6□□□□□ -1.19
CSNK1D-213ENST00000580446 FAM240BA0A1B0GVZ2 78 aa7.59□□□□□ -1.19
CSNK1D-213ENST00000580446 ZNF727A8MUV8 499 aa7.59□□□□□ -1.19
CSNK1D-213ENST00000580446 F2Z2F3 143 aa7.59□□□□□ -1.19
CSNK1D-213ENST00000580446 SCO1O75880 301 aa7.59□□□□□ -1.19
CSNK1D-213ENST00000580446 TNFRSF6BO95407 300 aa7.59□□□□□ -1.19
CSNK1D-213ENST00000580446 RPS20P60866 119 aaKnown RBP7.59□□□□□ -1.19
CSNK1D-213ENST00000580446 KRTAP9-8Q9BYQ0 159 aa7.59□□□□□ -1.19
CSNK1D-213ENST00000580446 UPK1BO75841 260 aa7.58□□□□□ -1.2
CSNK1D-213ENST00000580446 FHITP49789 147 aa7.58□□□□□ -1.2
CSNK1D-213ENST00000580446 TCEAL7Q9BRU2 100 aa7.58□□□□□ -1.2
CSNK1D-213ENST00000580446 S100A9P06702 114 aaKnown RBP7.57□□□□□ -1.2
CSNK1D-213ENST00000580446 RPL35P42766 123 aaKnown RBP7.57□□□□□ -1.2
CSNK1D-213ENST00000580446 RPL32P62910 135 aaKnown RBP7.57□□□□□ -1.2
CSNK1D-213ENST00000580446 PNRC1Q12796 327 aaPredicted RBP7.57□□□□□ -1.2
CSNK1D-213ENST00000580446 ST20Q9HBF5 79 aa7.57□□□□□ -1.2
CSNK1D-213ENST00000580446 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
CSNK1D-213ENST00000580446 TRBV6-5A0A0K0K1A5 114 aa7.56□□□□□ -1.2
CSNK1D-213ENST00000580446 CFC1P0CG37 223 aa7.56□□□□□ -1.2
CSNK1D-213ENST00000580446 RPL7L1Q6DKI1 246 aaKnown RBP7.56□□□□□ -1.2
CSNK1D-213ENST00000580446 TMUB2Q71RG4 321 aa7.56□□□□□ -1.2
CSNK1D-213ENST00000580446 PLEKHB2Q96CS7 222 aa7.56□□□□□ -1.2
CSNK1D-213ENST00000580446 TP73-AS1Q9UF72 201 aa7.56□□□□□ -1.2
CSNK1D-213ENST00000580446 IGKV2-28A0A075B6P5 120 aa7.55□□□□□ -1.2
CSNK1D-213ENST00000580446 IGKV2D-28P01615 120 aa7.55□□□□□ -1.2
CSNK1D-213ENST00000580446 KRTAP20-1Q3LI63 56 aa7.55□□□□□ -1.2
CSNK1D-213ENST00000580446 CENPWQ5EE01 88 aa7.55□□□□□ -1.2
CSNK1D-213ENST00000580446 CCDC32Q9BV29 185 aa7.55□□□□□ -1.2
CSNK1D-213ENST00000580446 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
CSNK1D-213ENST00000580446 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
CSNK1D-213ENST00000580446 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
CSNK1D-213ENST00000580446 FCER1GP30273 86 aa7.54□□□□□ -1.2
CSNK1D-213ENST00000580446 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
CSNK1D-213ENST00000580446 Q8N377 158 aa7.54□□□□□ -1.2
CSNK1D-213ENST00000580446 C9orf62Q8N4C0 152 aa7.54□□□□□ -1.2
CSNK1D-213ENST00000580446 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
CSNK1D-213ENST00000580446 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
CSNK1D-213ENST00000580446 POLR2KP53803 58 aaKnown RBP7.53□□□□□ -1.2
CSNK1D-213ENST00000580446 AKR1C8PQ5T2L2 129 aa7.53□□□□□ -1.2
CSNK1D-213ENST00000580446 TMEM238C9JI98 176 aa7.52□□□□□ -1.21
CSNK1D-213ENST00000580446 SSNA1O43805 119 aa7.52□□□□□ -1.21
CSNK1D-213ENST00000580446 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
CSNK1D-213ENST00000580446 RAB19A4D1S5 217 aa7.51□□□□□ -1.21
CSNK1D-213ENST00000580446 IFITM10A6NMD0 228 aa7.51□□□□□ -1.21
CSNK1D-213ENST00000580446 SMKR1H3BMG3 65 aa7.51□□□□□ -1.21
CSNK1D-213ENST00000580446 RPL39P62891 51 aaKnown RBP7.51□□□□□ -1.21
CSNK1D-213ENST00000580446 TRBV27A0A0K0K1C4 114 aa7.5□□□□□ -1.21
CSNK1D-213ENST00000580446 PFDN1O60925 122 aa7.5□□□□□ -1.21
CSNK1D-213ENST00000580446 SPINK1P00995 79 aa7.5□□□□□ -1.21
CSNK1D-213ENST00000580446 TEX261Q6UWH6 196 aa7.5□□□□□ -1.21
CSNK1D-213ENST00000580446 CNFNQ9BYD5 112 aa7.5□□□□□ -1.21
CSNK1D-213ENST00000580446 TOMM7Q9P0U1 55 aa7.5□□□□□ -1.21
CSNK1D-213ENST00000580446 TGIF2-C20orf24A0A0A6YYL0 155 aa7.49□□□□□ -1.21
CSNK1D-213ENST00000580446 Q6Q795 121 aa7.49□□□□□ -1.21
CSNK1D-213ENST00000580446 SMIM15Q7Z3B0 74 aa7.49□□□□□ -1.21
CSNK1D-213ENST00000580446 HIGD2AQ9BW72 106 aa7.49□□□□□ -1.21
CSNK1D-213ENST00000580446 SPRR4Q96PI1 79 aa7.48□□□□□ -1.21
CSNK1D-213ENST00000580446 CBLN2Q8IUK8 224 aa7.47□□□□□ -1.21
CSNK1D-213ENST00000580446 CKS1BP61024 79 aa7.46□□□□□ -1.22
CSNK1D-213ENST00000580446 NUDT10Q8NFP7 164 aa7.46□□□□□ -1.22
CSNK1D-213ENST00000580446 NUDT11Q96G61 164 aa7.46□□□□□ -1.22
CSNK1D-213ENST00000580446 HBBP68871 147 aa7.45□□□□□ -1.22
CSNK1D-213ENST00000580446 FAM19A2Q8N3H0 131 aa7.45□□□□□ -1.22
CSNK1D-213ENST00000580446 ENKURQ8TC29 256 aa7.45□□□□□ -1.22
CSNK1D-213ENST00000580446 SFT2D1Q8WV19 159 aa7.45□□□□□ -1.22
CSNK1D-213ENST00000580446 TMEM126AQ9H061 195 aa7.45□□□□□ -1.22
CSNK1D-213ENST00000580446 VCYO14598 125 aa7.44□□□□□ -1.22
CSNK1D-213ENST00000580446 MT2AP02795 61 aa7.44□□□□□ -1.22
CSNK1D-213ENST00000580446 SMAGPQ0VAQ4 97 aa7.44□□□□□ -1.22
CSNK1D-213ENST00000580446 Q5BKY6 102 aa7.44□□□□□ -1.22
CSNK1D-213ENST00000580446 NKAPP1Q8N9T2 125 aa7.44□□□□□ -1.22
CSNK1D-213ENST00000580446 TIMM21Q9BVV7 248 aa7.44□□□□□ -1.22
CSNK1D-213ENST00000580446 TRBV20OR9-2A0A075B6H5 130 aa7.43□□□□□ -1.22
CSNK1D-213ENST00000580446 BORCS7-ASMTA0A0B4J1R7 106 aa7.43□□□□□ -1.22
CSNK1D-213ENST00000580446 SLC25A20O43772 301 aa7.43□□□□□ -1.22
CSNK1D-213ENST00000580446 PRSS2P07478 247 aa7.43□□□□□ -1.22
CSNK1D-213ENST00000580446 GNG4P50150 75 aa7.43□□□□□ -1.22
CSNK1D-213ENST00000580446 KCNRGQ8N5I3 272 aa7.43□□□□□ -1.22
CSNK1D-213ENST00000580446 M0R378 163 aa7.41□□□□□ -1.22
CSNK1D-213ENST00000580446 AMN1Q8IY45 258 aa7.41□□□□□ -1.22
CSNK1D-213ENST00000580446 FAM213BQ8TBF2 198 aa7.41□□□□□ -1.22
CSNK1D-213ENST00000580446 MT1FP04733 61 aa7.4□□□□□ -1.22
CSNK1D-213ENST00000580446 MOBPQ13875 183 aa7.4□□□□□ -1.22
CSNK1D-213ENST00000580446 C6orf226Q5I0X4 101 aa7.4□□□□□ -1.22
CSNK1D-213ENST00000580446 IGLV5-37A0A075B6J1 123 aa7.39□□□□□ -1.23
CSNK1D-213ENST00000580446 IGLV9-49A0A0B4J1Y8 123 aa7.39□□□□□ -1.23
CSNK1D-213ENST00000580446 RAB4AP20338 218 aa7.39□□□□□ -1.23
CSNK1D-213ENST00000580446 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
CSNK1D-213ENST00000580446 ZC2HC1BQ5TFG8 222 aa7.39□□□□□ -1.23
CSNK1D-213ENST00000580446 C11orf52Q96A22 123 aa7.39□□□□□ -1.23
CSNK1D-213ENST00000580446 GIPP09681 153 aaPredicted RBP7.38□□□□□ -1.23
CSNK1D-213ENST00000580446 KRTAP19-6Q3LI70 58 aa7.38□□□□□ -1.23
CSNK1D-213ENST00000580446 NRACQ8N912 160 aa7.38□□□□□ -1.23
CSNK1D-213ENST00000580446 TMEM18Q96B42 140 aa7.38□□□□□ -1.23
CSNK1D-213ENST00000580446 FAM210AQ96ND0 272 aa7.38□□□□□ -1.23
CSNK1D-213ENST00000580446 ALKBH7Q9BT30 221 aaPredicted RBP7.38□□□□□ -1.23
CSNK1D-213ENST00000580446 KRTAP9-3Q9BYQ3 159 aa7.38□□□□□ -1.23
CSNK1D-213ENST00000580446 RAB5BP61020 215 aa7.36□□□□□ -1.23
CSNK1D-213ENST00000580446 CCL20P78556 96 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms