RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 LINC00310P59036 64 aa4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 PMCHL1Q16048 86 aa4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 ORMDL2Q53FV1 153 aa4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 ENHOQ6UWT2 76 aa4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 C2orf66Q6UXQ4 117 aa4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 Q6ZUT4 128 aa4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 MRPL52Q86TS9 123 aaKnown RBP4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 LINC00269Q8N2A0 174 aa4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 PLAC8Q9NZF1 115 aa4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 A0A087WYN8 130 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 A0A096LNJ9 63 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 IGKV3OR2-268A0A0C4DH90 116 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 K7EMI3 77 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST1H2BKO60814 126 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST1H2BJP06899 126 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 LINC00614P0C842 121 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 ZNF25P17030 456 aaPredicted RBP4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST1H2BOP23527 126 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST1H2BBP33778 126 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST1H2BDP58876 126 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 CNBPP62633 177 aaKnown RBP4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST1H2BCP62807 126 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 PRR3P79522 188 aaKnown RBP4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST2H2BEQ16778 126 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 RNASE13Q5GAN3 156 aaKnown RBP4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 BAGE3Q86Y29 109 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 OR5A1Q8NGJ0 315 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 SPACA4Q8TDM5 124 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST1H2BHQ93079 126 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 FAM104AQ969W3 186 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 TMEM18Q96B42 140 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 TMEM101Q96IK0 257 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST1H2BNQ99877 126 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HIST1H2BMQ99879 126 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 OPRPNQ99935 248 aaPredicted RBP4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 TIMM21Q9BVV7 248 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 AP5S1Q9NUS5 200 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 PRR34Q9NV39 138 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 CYSLTR1Q9Y271 337 aa4.51□□□□□ -1.69
CDK5RAP3-209ENST00000578663 IGLV4-3A0A075B6K6 122 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 C1orf196B1AJZ1 125 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 NUPR1O60356 82 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 SERF1AO75920 110 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 CRPP02741 224 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 MIAQ16674 131 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 ZC2HC1BQ5TFG8 222 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 SPINK6Q6UWN8 80 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 TOMM6Q96B49 74 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 CDC42SE2Q9NRR3 84 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 SPANXA1Q9NS26 97 aa4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
CDK5RAP3-209ENST00000578663 IGLV10-54A0A075B6I4 117 aa4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 IGHV3-64A0A075B6Q5 118 aa4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 IGIPA6NJ69 53 aa4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HBDP02042 147 aa4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 RAB5BP61020 215 aa4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 MRPS36P82909 103 aaKnown RBP4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 REG3AQ06141 175 aa4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 SMAGPQ0VAQ4 97 aa4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 FAM19A2Q8N3H0 131 aa4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 ZNF664Q8N3J9 261 aa4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 CHCHD1Q96BP2 118 aaKnown RBP4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 PYGO1Q9Y3Y4 419 aa4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 CSDC2Q9Y534 153 aaKnown RBP4.49□□□□□ -1.69
CDK5RAP3-209ENST00000578663 HSBP1O75506 76 aa4.48□□□□□ -1.69
CDK5RAP3-209ENST00000578663 PDZD11Q5EBL8 140 aa4.48□□□□□ -1.69
CDK5RAP3-209ENST00000578663 KRTAP26-1Q6PEX3 210 aa4.48□□□□□ -1.69
CDK5RAP3-209ENST00000578663 LINC00173Q6ZV60 143 aa4.48□□□□□ -1.69
CDK5RAP3-209ENST00000578663 TMEM141Q96I45 108 aa4.48□□□□□ -1.69
CDK5RAP3-209ENST00000578663 SCGB3A1Q96QR1 104 aa4.48□□□□□ -1.69
CDK5RAP3-209ENST00000578663 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
CDK5RAP3-209ENST00000578663 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 LINC00959A0A1B0GUT2 108 aa4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 IFITM10A6NMD0 228 aa4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 CHTF8P0CG12 524 aa4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 G0S2P27469 103 aa4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 NDUFA6P56556 154 aa4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 ERASQ7Z444 233 aa4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 CHCHD10Q8WYQ3 142 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 AMELXQ99217 191 aa4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 TMA7Q9Y2S6 64 aaKnown RBP4.47□□□□□ -1.69
CDK5RAP3-209ENST00000578663 TRAV8-4A0A0B4J246 113 aa4.46□□□□□ -1.7
CDK5RAP3-209ENST00000578663 GAGE12HA6NDE8 117 aa4.46□□□□□ -1.7
CDK5RAP3-209ENST00000578663 CCL25O15444 150 aa4.46□□□□□ -1.7
CDK5RAP3-209ENST00000578663 NPSP0C0P6 89 aa4.46□□□□□ -1.7
CDK5RAP3-209ENST00000578663 XCL1P47992 114 aa4.46□□□□□ -1.7
CDK5RAP3-209ENST00000578663 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
CDK5RAP3-209ENST00000578663 COA6Q5JTJ3 125 aaKnown RBP4.46□□□□□ -1.7
CDK5RAP3-209ENST00000578663 Q6ZN92 141 aa4.46□□□□□ -1.7
CDK5RAP3-209ENST00000578663 TEX43Q6ZNM6 134 aa4.46□□□□□ -1.7
CDK5RAP3-209ENST00000578663 DPH3Q96FX2 82 aa4.46□□□□□ -1.7
CDK5RAP3-209ENST00000578663 LINC01549A6NIU2 74 aa4.45□□□□□ -1.7
CDK5RAP3-209ENST00000578663 ATP5LO75964 103 aa4.45□□□□□ -1.7
CDK5RAP3-209ENST00000578663 UBE2D1P51668 147 aa4.45□□□□□ -1.7
CDK5RAP3-209ENST00000578663 FOXI1Q12951 378 aa4.45□□□□□ -1.7
CDK5RAP3-209ENST00000578663 SS18Q15532 418 aa4.45□□□□□ -1.7
CDK5RAP3-209ENST00000578663 VCX2Q9H322 139 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms