RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 SMAD5-AS1Q9Y6J3 95 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 FASNP49327 2511 aaKnown RBP5.04□□□□□ -1.6
KRT39-203ENST00000578078 LRRK2Q5S007 2527 aa5.04□□□□□ -1.6
KRT39-203ENST00000578078 MAP1AP78559 2803 aaPredicted RBP5.04□□□□□ -1.6
KRT39-203ENST00000578078 NDUFA4O00483 81 aa5.04□□□□□ -1.6
KRT39-203ENST00000578078 BAALC-AS2P0C853 105 aa5.04□□□□□ -1.6
KRT39-203ENST00000578078 BLCAPP62952 87 aa5.04□□□□□ -1.6
KRT39-203ENST00000578078 FHL2Q14192 279 aa5.04□□□□□ -1.6
KRT39-203ENST00000578078 LYPD5Q6UWN5 251 aa5.04□□□□□ -1.6
KRT39-203ENST00000578078 CHD6Q8TD26 2715 aa5.04□□□□□ -1.6
KRT39-203ENST00000578078 CSMD1Q96PZ7 3565 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 IGHV3-66A0A0C4DH42 116 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 IGHV4-59P01825 116 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 KRTAP10-9P60411 292 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 C9orf139Q6ZV77 190 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 LINC01561Q8N1V8 128 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 MAPK1IP1LQ8NDC0 245 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 NDUFA12Q9UI09 145 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 PHLDA3Q9Y5J5 127 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 KIF25-AS1Q9Y6Z4 181 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 FBN2P35556 2912 aa5.03□□□□□ -1.6
KRT39-203ENST00000578078 IGHV3OR16-13A0A075B7E8 117 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 IGHV3-74A0A0B4J1X5 117 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 H7BZZ5 65 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 FSHBP01225 129 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 IGHV3-11P01762 117 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 PRSS2P07478 247 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 IGFL4Q6B9Z1 124 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 RPL39LQ96EH5 51 aaKnown RBP5.02□□□□□ -1.61
KRT39-203ENST00000578078 CENPEQ02224 2701 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 PRRC2AP48634 2157 aaKnown RBP5.02□□□□□ -1.61
KRT39-203ENST00000578078 TRAV7A0A075B6U4 112 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 A0A087WZ39 114 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 IGHV3-49A0A0A0MS15 119 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 NDUFA1O15239 70 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 TRBV12-3P01733 135 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 S100A4P26447 101 aaKnown RBP5.02□□□□□ -1.61
KRT39-203ENST00000578078 XCL1P47992 114 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 C20orf203Q8NBC4 194 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 XCL2Q9UBD3 114 aa5.02□□□□□ -1.61
KRT39-203ENST00000578078 H0YGX0 51 aa5.01□□□□□ -1.61
KRT39-203ENST00000578078 PRB4P10163 310 aaPredicted RBP5.01□□□□□ -1.61
KRT39-203ENST00000578078 RPL28P46779 137 aaKnown RBP5.01□□□□□ -1.61
KRT39-203ENST00000578078 LINC00315P59091 139 aa5.01□□□□□ -1.61
KRT39-203ENST00000578078 C22orf24Q9Y442 160 aa5.01□□□□□ -1.61
KRT39-203ENST00000578078 SVEP1Q4LDE5 3571 aa5□□□□□ -1.61
KRT39-203ENST00000578078 TRAV13-2A0A0B4J235 113 aa5□□□□□ -1.61
KRT39-203ENST00000578078 TRBV7-6A0A0J9YX20 115 aa5□□□□□ -1.61
KRT39-203ENST00000578078 UNQ9165/PRO28630Q6UXU0 137 aa5□□□□□ -1.61
KRT39-203ENST00000578078 PKIGQ9Y2B9 76 aa5□□□□□ -1.61
KRT39-203ENST00000578078 ZFHX3Q15911 3703 aa5□□□□□ -1.61
KRT39-203ENST00000578078 IGLV4-3A0A075B6K6 122 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 IGLV5-45A0A087WSX0 123 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 PRAC2D3DTV9 90 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 JMJD7-PLA2G4BH0Y9G9 81 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 J3QKU1 62 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 K7EMT4 169 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 SOCS3O14543 225 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 MGPP08493 103 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 Q6ZRU5 148 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 Q6ZVQ6 151 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 PRR15Q8IV56 129 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 USP9YO00507 2555 aaPredicted RBP4.99□□□□□ -1.61
KRT39-203ENST00000578078 POLQO75417 2590 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 CDK2AP2O75956 126 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 ERC2-IT1O76042 136 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 PLA2G2AP14555 144 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 ADAMTSL4-AS1Q5T5F5 129 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 FP248Q71RG6 208 aaPredicted RBP4.99□□□□□ -1.61
KRT39-203ENST00000578078 ZFAND2AQ8N6M9 145 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 LINC00308Q8TCZ7 52 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 RHPN1-AS1Q9BWJ2 59 aa4.99□□□□□ -1.61
KRT39-203ENST00000578078 APCP25054 2843 aa4.98□□□□□ -1.61
KRT39-203ENST00000578078 CSPG4Q6UVK1 2322 aa4.98□□□□□ -1.61
KRT39-203ENST00000578078 RPL39P62891 51 aaKnown RBP4.98□□□□□ -1.61
KRT39-203ENST00000578078 KRTAP1-3Q8IUG1 177 aa4.98□□□□□ -1.61
KRT39-203ENST00000578078 ZNF702PQ9H963 129 aa4.98□□□□□ -1.61
KRT39-203ENST00000578078 LINC00846Q9NV44 126 aa4.98□□□□□ -1.61
KRT39-203ENST00000578078 TENM4Q6N022 2769 aa4.98□□□□□ -1.61
KRT39-203ENST00000578078 ZANQ9Y493 2812 aa4.97□□□□□ -1.61
KRT39-203ENST00000578078 CSMD2Q7Z408 3487 aa4.97□□□□□ -1.61
KRT39-203ENST00000578078 NAV2Q8IVL1 2488 aa4.97□□□□□ -1.61
KRT39-203ENST00000578078 ABCA12Q86UK0 2595 aa4.97□□□□□ -1.61
KRT39-203ENST00000578078 CCKP06307 115 aa4.97□□□□□ -1.61
KRT39-203ENST00000578078 RNASE3P12724 160 aaKnown RBP4.97□□□□□ -1.61
KRT39-203ENST00000578078 CD164Q04900 197 aa4.97□□□□□ -1.61
KRT39-203ENST00000578078 PTPN13Q12923 2485 aa4.97□□□□□ -1.61
KRT39-203ENST00000578078 A0A0J9YXV3 536 aa4.96□□□□□ -1.61
KRT39-203ENST00000578078 IBA57-AS1B1ANH7 110 aa4.96□□□□□ -1.61
KRT39-203ENST00000578078 PMAIP1Q13794 54 aa4.96□□□□□ -1.61
KRT39-203ENST00000578078 FAM19A3Q7Z5A8 133 aa4.96□□□□□ -1.61
KRT39-203ENST00000578078 C20orf197Q8N268 126 aa4.96□□□□□ -1.61
KRT39-203ENST00000578078 UBE2E2Q96LR5 201 aa4.96□□□□□ -1.61
KRT39-203ENST00000578078 TEX15Q9BXT5 2789 aa4.96□□□□□ -1.62
KRT39-203ENST00000578078 IGKV3-7A0A075B6H7 116 aa4.96□□□□□ -1.62
KRT39-203ENST00000578078 PLAC8L1A1L4L8 177 aa4.96□□□□□ -1.62
KRT39-203ENST00000578078 C10orf99Q6UWK7 81 aa4.96□□□□□ -1.62
KRT39-203ENST00000578078 FAM19A1Q7Z5A9 133 aa4.96□□□□□ -1.62
KRT39-203ENST00000578078 Q8N2B8 174 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms