RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 S100A4P26447 101 aaKnown RBP2.94□□□□□ -1.94
KRT39-202ENST00000578029 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.94□□□□□ -1.94
KRT39-202ENST00000578029 ZNF826PQ6ZT77 177 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 DYNAPQ8N1N2 210 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 SPANXA2-OT1Q8N9U9 137 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 ARHGAP5-AS1Q96IT6 56 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 TIMM21Q9BVV7 248 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 U3KQK5 164 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 ASCC3Q8N3C0 2202 aaKnown RBP2.94□□□□□ -1.94
KRT39-202ENST00000578029 FN1P02751 2386 aaKnown RBP2.94□□□□□ -1.94
KRT39-202ENST00000578029 IGKV1D-17A0A075B6S4 117 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 TRAV12-1A0A0B4J245 112 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 IGKV1-9A0A0C4DH69 117 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 A6NN06 94 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 ARL14EPLP0DKL9 152 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 LINC01554Q52M75 96 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 DEFB106AQ8N104 65 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 TTTY13Q9BZ97 58 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 R4GMQ9 66 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 KNTC1P50748 2209 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 SDK1Q7Z5N4 2213 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 SCN3AQ9NY46 2000 aa2.93□□□□□ -1.94
KRT39-202ENST00000578029 PCDH15Q96QU1 1955 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 CELSR1Q9NYQ6 3014 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 A0A1B0GVY2 172 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 F8WEM9 126 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 K7EMI3 77 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 ERC2-IT1O76042 136 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 IGLV3-27P01718 113 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 IGHV3-30P01768 117 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 IGHV3-30-5P0DP03 117 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 MIFP14174 115 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 KRTAP10-7P60409 375 aaPredicted RBP2.92□□□□□ -1.94
KRT39-202ENST00000578029 FGF12P61328 243 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 EIF4EBP1Q13541 118 aaPredicted RBP2.92□□□□□ -1.94
KRT39-202ENST00000578029 ASB16-AS1Q495Z4 193 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 SPANXN5Q5MJ07 72 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 TMEM263Q8WUH6 116 aaKnown RBP2.92□□□□□ -1.94
KRT39-202ENST00000578029 TIMM8BQ9Y5J9 83 aaPredicted RBP2.92□□□□□ -1.94
KRT39-202ENST00000578029 ICE1Q9Y2F5 2266 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 CACNA1DQ01668 2161 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 ADGRG4Q8IZF6 3080 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 OTOGQ6ZRI0 2925 aa2.92□□□□□ -1.94
KRT39-202ENST00000578029 DOCK11Q5JSL3 2073 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 MYO16Q9Y6X6 1858 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 IGKV2D-24A0A075B6R9 120 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 F8VRH5 84 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 SH2D1AO60880 128 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 LHBP01229 141 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 PRM2P04554 102 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 RNASE4P34096 147 aaKnown RBP2.91□□□□□ -1.94
KRT39-202ENST00000578029 MIR7-3HGQ8N6C7 128 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 PFN4Q8NHR9 129 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 ANKHD1Q8IWZ3 2542 aaKnown RBP2.91□□□□□ -1.94
KRT39-202ENST00000578029 BOD1L1Q8NFC6 3051 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 ATG2BQ96BY7 2078 aa2.91□□□□□ -1.94
KRT39-202ENST00000578029 NBASA2RRP1 2371 aa2.9□□□□□ -1.94
KRT39-202ENST00000578029 JMJD1CQ15652 2540 aa2.9□□□□□ -1.94
KRT39-202ENST00000578029 HIVEP3Q5T1R4 2406 aa2.9□□□□□ -1.94
KRT39-202ENST00000578029 BSNQ9UPA5 3926 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 TRAV40A0A0B4J280 105 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 A0A0J9YY99 117 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 A0A1B0GUT8 65 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 ZNF815PA8K554 130 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 E7EUB6 86 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 CCL22O00626 93 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 IGHV1-46P01743 117 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 PRB1P04280 392 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 SAA1P0DJI8 122 aaPredicted RBP2.9□□□□□ -1.95
KRT39-202ENST00000578029 IAPPP10997 89 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 FXYD4P59646 89 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 SPANXN1Q5VSR9 72 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 SFTA2Q6UW10 78 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 IGFL3Q6UXB1 125 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 SOSTDC1Q6X4U4 206 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 KRTAP11-1Q8IUC1 163 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 LINC00269Q8N2A0 174 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 FAM216BQ8N7L0 139 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 ITLN2Q8WWU7 325 aaPredicted RBP2.9□□□□□ -1.95
KRT39-202ENST00000578029 CYP4F30PQ9H0H9 118 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 PHLDA3Q9Y5J5 127 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 THADAQ6YHU6 1953 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 SPENQ96T58 3664 aaKnown RBP2.9□□□□□ -1.95
KRT39-202ENST00000578029 CSMD1Q96PZ7 3565 aa2.9□□□□□ -1.95
KRT39-202ENST00000578029 PRRC2AP48634 2157 aaKnown RBP2.9□□□□□ -1.95
KRT39-202ENST00000578029 GOLGA4Q13439 2230 aaKnown RBP2.89□□□□□ -1.95
KRT39-202ENST00000578029 NBEAL1Q6ZS30 2694 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 PDZD2O15018 2839 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 COL5A1P20908 1838 aaPredicted RBP2.89□□□□□ -1.95
KRT39-202ENST00000578029 IGLV4-60A0A075B6I1 120 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 C19orf84I3L1E1 186 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 M0R135 149 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 GNRH2O43555 120 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 COX6B1P14854 86 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 HMGA1P17096 107 aaKnown RBP2.89□□□□□ -1.95
KRT39-202ENST00000578029 TFF3Q07654 80 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 ATRQ13535 2644 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 SCXQ7RTU7 201 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 CCL4L1Q8NHW4 92 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms