RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 SLPIP03973 132 aa13.01□□□□□ -0.33
SUPT4H1-202ENST00000577396 LINC00310P59036 64 aa13.01□□□□□ -0.33
SUPT4H1-202ENST00000577396 COX6A2Q02221 97 aa13.01□□□□□ -0.33
SUPT4H1-202ENST00000577396 FAM19A3Q7Z5A8 133 aa13.01□□□□□ -0.33
SUPT4H1-202ENST00000577396 BAGE3Q86Y29 109 aa13.01□□□□□ -0.33
SUPT4H1-202ENST00000577396 C2orf88Q9BSF0 95 aa13.01□□□□□ -0.33
SUPT4H1-202ENST00000577396 DNAH8Q96JB1 4490 aa13.01□□□□□ -0.33
SUPT4H1-202ENST00000577396 hDV102S1A0JD36 115 aa13□□□□□ -0.33
SUPT4H1-202ENST00000577396 C5orf38Q86SI9 138 aa13□□□□□ -0.33
SUPT4H1-202ENST00000577396 GVQW2A0A096LPI5 108 aaPredicted RBP12.99□□□□□ -0.33
SUPT4H1-202ENST00000577396 IGHV1-58A0A0C4DH39 117 aa12.99□□□□□ -0.33
SUPT4H1-202ENST00000577396 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.99□□□□□ -0.33
SUPT4H1-202ENST00000577396 CNBPP62633 177 aaKnown RBP12.98□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIGD2BQ4VC39 106 aa12.98□□□□□ -0.33
SUPT4H1-202ENST00000577396 CST9LQ9H4G1 147 aa12.98□□□□□ -0.33
SUPT4H1-202ENST00000577396 LINC01620Q4KN68 170 aa12.97□□□□□ -0.33
SUPT4H1-202ENST00000577396 NUPR1O60356 82 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST1H2BKO60814 126 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 SERF1AO75920 110 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST1H2BJP06899 126 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 MALP21145 153 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST1H2BOP23527 126 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST1H2BBP33778 126 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST1H2BDP58876 126 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST1H2BCP62807 126 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST2H2BEQ16778 126 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST1H2BHQ93079 126 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST1H2BNQ99877 126 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 HIST1H2BMQ99879 126 aa12.96□□□□□ -0.33
SUPT4H1-202ENST00000577396 A0A087WZ39 114 aa12.95□□□□□ -0.34
SUPT4H1-202ENST00000577396 PMVKQ15126 192 aa12.95□□□□□ -0.34
SUPT4H1-202ENST00000577396 C9orf163Q8N9P6 203 aa12.95□□□□□ -0.34
SUPT4H1-202ENST00000577396 HSBP1O75506 76 aa12.95□□□□□ -0.34
SUPT4H1-202ENST00000577396 FAM19A2Q8N3H0 131 aa12.95□□□□□ -0.34
SUPT4H1-202ENST00000577396 A0A0J9YXV3 536 aa12.94□□□□□ -0.34
SUPT4H1-202ENST00000577396 ATP5LO75964 103 aa12.94□□□□□ -0.34
SUPT4H1-202ENST00000577396 LINC00526Q96FQ7 95 aa12.94□□□□□ -0.34
SUPT4H1-202ENST00000577396 HERC2O95714 4834 aa12.93□□□□□ -0.34
SUPT4H1-202ENST00000577396 HSPG2P98160 4391 aa12.93□□□□□ -0.34
SUPT4H1-202ENST00000577396 IGHV3-64A0A075B6Q5 118 aa12.92□□□□□ -0.34
SUPT4H1-202ENST00000577396 SEC11AP67812 179 aa12.92□□□□□ -0.34
SUPT4H1-202ENST00000577396 CDK2AP2O75956 126 aa12.91□□□□□ -0.34
SUPT4H1-202ENST00000577396 APOMO95445 188 aa12.91□□□□□ -0.34
SUPT4H1-202ENST00000577396 HERVK_113P63121 156 aa12.91□□□□□ -0.34
SUPT4H1-202ENST00000577396 LINC01561Q8N1V8 128 aa12.91□□□□□ -0.34
SUPT4H1-202ENST00000577396 FAM30AQ9NZY2 134 aa12.91□□□□□ -0.34
SUPT4H1-202ENST00000577396 TINCRA0A1B0GVN0 87 aa12.91□□□□□ -0.34
SUPT4H1-202ENST00000577396 CDKN2A-AS1Q9UH64 79 aa12.91□□□□□ -0.34
SUPT4H1-202ENST00000577396 IGLV4-69A0A075B6H9 119 aa12.9□□□□□ -0.34
SUPT4H1-202ENST00000577396 ZNF561-AS1K7EIQ3 104 aa12.9□□□□□ -0.34
SUPT4H1-202ENST00000577396 SDIM1Q6ZPB5 146 aa12.9□□□□□ -0.34
SUPT4H1-202ENST00000577396 Q6ZSA8 131 aa12.9□□□□□ -0.34
SUPT4H1-202ENST00000577396 OR10D4PQ8NGN7 298 aa12.9□□□□□ -0.34
SUPT4H1-202ENST00000577396 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.89□□□□□ -0.35
SUPT4H1-202ENST00000577396 XGP55808 180 aa12.89□□□□□ -0.35
SUPT4H1-202ENST00000577396 GEMIN7Q9H840 131 aaKnown RBP12.89□□□□□ -0.35
SUPT4H1-202ENST00000577396 IGLV5-45A0A087WSX0 123 aa12.88□□□□□ -0.35
SUPT4H1-202ENST00000577396 ORAOV1Q8WV07 137 aa12.88□□□□□ -0.35
SUPT4H1-202ENST00000577396 IFI27L1Q96BM0 104 aa12.88□□□□□ -0.35
SUPT4H1-202ENST00000577396 NDUFA6P56556 154 aa12.88□□□□□ -0.35
SUPT4H1-202ENST00000577396 KIAA0087Q14695 138 aa12.88□□□□□ -0.35
SUPT4H1-202ENST00000577396 C2orf48Q96LS8 159 aa12.88□□□□□ -0.35
SUPT4H1-202ENST00000577396 SPAG11BQ08648 103 aa12.87□□□□□ -0.35
SUPT4H1-202ENST00000577396 IGLC3P0DOY3 106 aa12.86□□□□□ -0.35
SUPT4H1-202ENST00000577396 SYCNQ0VAF6 134 aa12.85□□□□□ -0.35
SUPT4H1-202ENST00000577396 LEPROTL1O95214 131 aa12.84□□□□□ -0.35
SUPT4H1-202ENST00000577396 COA6Q5JTJ3 125 aaKnown RBP12.84□□□□□ -0.35
SUPT4H1-202ENST00000577396 LINC00469Q8N7U9 141 aa12.84□□□□□ -0.35
SUPT4H1-202ENST00000577396 TRAV12-1A0A0B4J245 112 aa12.84□□□□□ -0.35
SUPT4H1-202ENST00000577396 Q6ZRU5 148 aa12.84□□□□□ -0.35
SUPT4H1-202ENST00000577396 CARD19Q96LW7 228 aa12.83□□□□□ -0.36
SUPT4H1-202ENST00000577396 CAMK2N2Q96S95 79 aa12.83□□□□□ -0.36
SUPT4H1-202ENST00000577396 F8WDY8 70 aa12.82□□□□□ -0.36
SUPT4H1-202ENST00000577396 CHAC1Q9BUX1 264 aa12.81□□□□□ -0.36
SUPT4H1-202ENST00000577396 KRTAP17-1Q9BYP8 105 aa12.81□□□□□ -0.36
SUPT4H1-202ENST00000577396 FAT1Q14517 4588 aa12.81□□□□□ -0.36
SUPT4H1-202ENST00000577396 SMIM1B2RUZ4 78 aa12.8□□□□□ -0.36
SUPT4H1-202ENST00000577396 PANO1I0J062 215 aa12.8□□□□□ -0.36
SUPT4H1-202ENST00000577396 FABP4P15090 132 aa12.8□□□□□ -0.36
SUPT4H1-202ENST00000577396 HSPB8Q9UJY1 196 aa12.8□□□□□ -0.36
SUPT4H1-202ENST00000577396 CHTOPQ9Y3Y2 248 aaKnown RBP12.8□□□□□ -0.36
SUPT4H1-202ENST00000577396 C11orf86A6NJI1 115 aa12.8□□□□□ -0.36
SUPT4H1-202ENST00000577396 ZNF22P17026 224 aaPredicted RBP12.8□□□□□ -0.36
SUPT4H1-202ENST00000577396 HAMPP81172 84 aa12.8□□□□□ -0.36
SUPT4H1-202ENST00000577396 C10orf25Q5T742 122 aa12.8□□□□□ -0.36
SUPT4H1-202ENST00000577396 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.8□□□□□ -0.36
SUPT4H1-202ENST00000577396 CIRBPQ14011 172 aaKnown RBP12.79□□□□□ -0.36
SUPT4H1-202ENST00000577396 UNQ6190/PRO20217Q6UXQ8 127 aa12.79□□□□□ -0.36
SUPT4H1-202ENST00000577396 Q8IZM0 81 aa12.79□□□□□ -0.36
SUPT4H1-202ENST00000577396 PACRGQ96M98 296 aaPredicted RBP12.79□□□□□ -0.36
SUPT4H1-202ENST00000577396 MRPL35Q9NZE8 188 aaKnown RBP12.79□□□□□ -0.36
SUPT4H1-202ENST00000577396 RNF151Q2KHN1 245 aa12.78□□□□□ -0.36
SUPT4H1-202ENST00000577396 F8VRH5 84 aa12.77□□□□□ -0.36
SUPT4H1-202ENST00000577396 NDUFA1O15239 70 aa12.77□□□□□ -0.36
SUPT4H1-202ENST00000577396 SPINK8P0C7L1 97 aa12.77□□□□□ -0.36
SUPT4H1-202ENST00000577396 ODF1Q14990 250 aa12.77□□□□□ -0.36
SUPT4H1-202ENST00000577396 C2orf82Q6UX34 121 aa12.77□□□□□ -0.36
SUPT4H1-202ENST00000577396 TOMM7Q9P0U1 55 aa12.77□□□□□ -0.37
SUPT4H1-202ENST00000577396 H3BRM9 83 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms