RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TOP2BQ02880 1626 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 ADIRFQ15847 76 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 PMCHL1Q16048 86 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 SPHKAPQ2M3C7 1700 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 NMSQ5H8A3 153 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 MAGI3Q5TCQ9 1506 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 KRTAP5-10Q6L8G5 202 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 ABCC2Q92887 1545 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 S100A16Q96FQ6 103 aaKnown RBP0.51□□□□□ -2.33
COPS3-213ENST00000577210 LINC01600Q96MT4 127 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 LRRC7Q96NW7 1537 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 PLIN4Q96Q06 1357 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 VAMP8Q9BV40 100 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 NMES1Q9C002 83 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 DPH3P1Q9H4G8 78 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 ST20Q9HBF5 79 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 DYNLRB1Q9NP97 96 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 MANBALQ9NQG1 85 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 ARHGEF12Q9NZN5 1544 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 ABCA1O95477 2261 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 TET3O43151 1660 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 TARBP1Q13395 1621 aaKnown RBP0.5□□□□□ -2.33
COPS3-213ENST00000577210 UNC13BO14795 1591 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 ABCC8Q09428 1581 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 EFCAB5A4FU69 1503 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 ZFYVE16Q7Z3T8 1539 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 CRYM-AS1A6NIL9 109 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 TMEM262E9PQX1 116 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 CHKB-CPT1BH3BT56 60 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 SYS1-DBNDD2H3BUS1 97 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 H3BUT2 72 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 HMGN4O00479 90 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 CYB5AP00167 134 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 C3orf79P0CE67 100 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 SMIM13P0DJ93 91 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 COX8AP10176 69 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 FAUP35544 74 aaKnown RBP0.5□□□□□ -2.33
COPS3-213ENST00000577210 SMIM11AP58511 58 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 ETDBQ3ZM63 59 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 NCBP2-AS2Q69YL0 99 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 SFTA2Q6UW10 78 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 SMIM5Q71RC9 77 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 RPS27LQ71UM5 84 aaKnown RBP0.5□□□□□ -2.33
COPS3-213ENST00000577210 PMCHL2Q9BQD1 86 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 C20orf78Q9BR46 151 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 PROK2Q9HC23 129 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 CMC2Q9NRP2 79 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 RABAC1Q9UI14 185 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 SPCS1Q9Y6A9 102 aa0.5□□□□□ -2.33
COPS3-213ENST00000577210 TMEM131LA2VDJ0 1609 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 ASXL1Q8IXJ9 1541 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 LOC730098B7Z3J9 87 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 F8VRH5 84 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 GYPAP02724 150 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 PRH1P02810 166 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 S100A3P33764 101 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 ASIPP42127 132 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 KRTDAPP60985 99 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 DEFB121Q5J5C9 76 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 PSMG4Q5JS54 123 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 BAGE2Q86Y30 109 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 UBE2DNLQ8IWF7 75 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 HIGD1BQ9P298 99 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 DOCK2Q92608 1830 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 TOPAZ1Q8N9V7 1692 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 F5P12259 2224 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 CLTCL1P53675 1640 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 BIVM-ERCC5R4GMW8 1640 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 ARHGEF5Q12774 1597 aa0.49□□□□□ -2.33
COPS3-213ENST00000577210 TRPM2O94759 1503 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 NFAT5O94916 1531 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 ATP7AQ04656 1500 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 URB2Q14146 1524 aaKnown RBP0.48□□□□□ -2.33
COPS3-213ENST00000577210 ZNF462Q96JM2 2506 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 MYH8P13535 1937 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 TRBV7-7A0A0K0K1E9 115 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 SMIM27A0A1W2PRY6 76 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 CEBPZOSA8MTT3 80 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 HAMPP81172 84 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 SERF2P84101 59 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 TMEM170BQ5T4T1 132 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 Q5VV11 94 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 KRTAP19-3Q7Z4W3 81 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 GNG13Q9P2W3 67 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 HILPDAQ9Y5L2 63 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 ARL2-SNX15V9GYD0 113 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 KIF21AQ7Z4S6 1674 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 ABCA5Q8WWZ7 1642 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 NEXMIFQ5QGS0 1516 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 EHBP1L1Q8N3D4 1523 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 SYCP2Q9BX26 1530 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 KNTC1P50748 2209 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 PSME4Q14997 1843 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 ZNF236Q9UL36 1845 aa0.48□□□□□ -2.33
COPS3-213ENST00000577210 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 MYOM1P52179 1685 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 PLCE1Q9P212 2302 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 PIK3C2BO00750 1634 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 TRBV25-1A0A075B6N4 114 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 MYMXA0A1B0GTQ4 84 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms