RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 TRAV12-1A0A0B4J245 112 aa11.53□□□□□ -0.56
ABR-236ENST00000577052 SMR3BP02814 79 aaPredicted RBP11.53□□□□□ -0.56
ABR-236ENST00000577052 PKIAP61925 76 aa11.53□□□□□ -0.56
ABR-236ENST00000577052 HAMPP81172 84 aa11.53□□□□□ -0.56
ABR-236ENST00000577052 JOSD1Q15040 202 aaPredicted RBP11.53□□□□□ -0.56
ABR-236ENST00000577052 CDPF1Q6NVV7 123 aa11.53□□□□□ -0.56
ABR-236ENST00000577052 TMEM101Q96IK0 257 aa11.53□□□□□ -0.56
ABR-236ENST00000577052 CST9LQ9H4G1 147 aa11.53□□□□□ -0.56
ABR-236ENST00000577052 A0A087WX48 190 aa11.52□□□□□ -0.57
ABR-236ENST00000577052 PAPPA-AS1Q5QFB9 102 aa11.52□□□□□ -0.57
ABR-236ENST00000577052 TEX43Q6ZNM6 134 aa11.52□□□□□ -0.57
ABR-236ENST00000577052 ZNF664Q8N3J9 261 aa11.52□□□□□ -0.57
ABR-236ENST00000577052 PMCHL2Q9BQD1 86 aa11.52□□□□□ -0.57
ABR-236ENST00000577052 SRRM2Q9UQ35 2752 aaKnown RBP11.51□□□□□ -0.57
ABR-236ENST00000577052 VCX2Q9H322 139 aa11.51□□□□□ -0.57
ABR-236ENST00000577052 MRPL35Q9NZE8 188 aaKnown RBP11.5□□□□□ -0.57
ABR-236ENST00000577052 IGLV4-69A0A075B6H9 119 aa11.49□□□□□ -0.57
ABR-236ENST00000577052 C20orf202A1L168 122 aa11.49□□□□□ -0.57
ABR-236ENST00000577052 F8VRH5 84 aa11.49□□□□□ -0.57
ABR-236ENST00000577052 SCGB1D1O95968 90 aa11.49□□□□□ -0.57
ABR-236ENST00000577052 IGHV3-30P01768 117 aa11.49□□□□□ -0.57
ABR-236ENST00000577052 IGHV3-33P01772 117 aa11.49□□□□□ -0.57
ABR-236ENST00000577052 IGHV3-30-3P0DP02 117 aa11.49□□□□□ -0.57
ABR-236ENST00000577052 IGHV3-30-5P0DP03 117 aa11.49□□□□□ -0.57
ABR-236ENST00000577052 CHTOPQ9Y3Y2 248 aaKnown RBP11.49□□□□□ -0.57
ABR-236ENST00000577052 EREGO14944 169 aa11.48□□□□□ -0.57
ABR-236ENST00000577052 UBE2D1P51668 147 aa11.48□□□□□ -0.57
ABR-236ENST00000577052 LINC01556Q5JQF7 62 aa11.48□□□□□ -0.57
ABR-236ENST00000577052 C2orf88Q9BSF0 95 aa11.48□□□□□ -0.57
ABR-236ENST00000577052 ANGP03950 147 aaKnown RBP11.47□□□□□ -0.57
ABR-236ENST00000577052 SMIM6P0DI80 62 aa11.47□□□□□ -0.57
ABR-236ENST00000577052 CLPSL2Q6UWE3 100 aa11.47□□□□□ -0.57
ABR-236ENST00000577052 IGLC3P0DOY3 106 aa11.46□□□□□ -0.57
ABR-236ENST00000577052 NFE4Q86UQ8 179 aa11.46□□□□□ -0.57
ABR-236ENST00000577052 ATOH7Q8N100 152 aa11.46□□□□□ -0.57
ABR-236ENST00000577052 TRAV13-1A0A0B4J241 112 aa11.45□□□□□ -0.58
ABR-236ENST00000577052 IGKV3OR2-268A0A0C4DH90 116 aa11.45□□□□□ -0.58
ABR-236ENST00000577052 A0A0J9YXV3 536 aa11.45□□□□□ -0.58
ABR-236ENST00000577052 C11orf86A6NJI1 115 aa11.45□□□□□ -0.58
ABR-236ENST00000577052 DPM2O94777 84 aa11.45□□□□□ -0.58
ABR-236ENST00000577052 GCSHP23434 173 aa11.45□□□□□ -0.58
ABR-236ENST00000577052 LINC00269Q8N2A0 174 aa11.45□□□□□ -0.58
ABR-236ENST00000577052 KLK12Q9UKR0 248 aa11.45□□□□□ -0.58
ABR-236ENST00000577052 LRCOL1A6NCL2 159 aa11.44□□□□□ -0.58
ABR-236ENST00000577052 IGKCP01834 107 aa11.44□□□□□ -0.58
ABR-236ENST00000577052 FAM19A3Q7Z5A8 133 aa11.44□□□□□ -0.58
ABR-236ENST00000577052 CHAC1Q9BUX1 264 aa11.44□□□□□ -0.58
ABR-236ENST00000577052 PRR34Q9NV39 138 aa11.44□□□□□ -0.58
ABR-236ENST00000577052 PLNP26678 52 aa11.43□□□□□ -0.58
ABR-236ENST00000577052 REG3AQ06141 175 aa11.43□□□□□ -0.58
ABR-236ENST00000577052 LINC00242Q5T6M2 205 aa11.43□□□□□ -0.58
ABR-236ENST00000577052 LINC00959A0A1B0GUT2 108 aa11.42□□□□□ -0.58
ABR-236ENST00000577052 ENHOQ6UWT2 76 aa11.42□□□□□ -0.58
ABR-236ENST00000577052 FAM30AQ9NZY2 134 aa11.42□□□□□ -0.58
ABR-236ENST00000577052 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
ABR-236ENST00000577052 ZNF22P17026 224 aaPredicted RBP11.4□□□□□ -0.58
ABR-236ENST00000577052 COX6A2Q02221 97 aa11.4□□□□□ -0.58
ABR-236ENST00000577052 MAJINQ3KP22 176 aa11.4□□□□□ -0.58
ABR-236ENST00000577052 UBE2WQ96B02 151 aa11.4□□□□□ -0.58
ABR-236ENST00000577052 IGLV5-45A0A087WSX0 123 aa11.39□□□□□ -0.59
ABR-236ENST00000577052 TRAV9-2A0A087WT02 112 aa11.39□□□□□ -0.59
ABR-236ENST00000577052 hDV102S1A0JD36 115 aa11.39□□□□□ -0.59
ABR-236ENST00000577052 CRPP02741 224 aa11.39□□□□□ -0.59
ABR-236ENST00000577052 LINC00518Q8N0U6 118 aa11.38□□□□□ -0.59
ABR-236ENST00000577052 C12orf57Q99622 126 aa11.38□□□□□ -0.59
ABR-236ENST00000577052 GEMIN7Q9H840 131 aaKnown RBP11.38□□□□□ -0.59
ABR-236ENST00000577052 IGLV10-54A0A075B6I4 117 aa11.37□□□□□ -0.59
ABR-236ENST00000577052 K7EP13 123 aa11.37□□□□□ -0.59
ABR-236ENST00000577052 CCL25O15444 150 aa11.37□□□□□ -0.59
ABR-236ENST00000577052 HERVK_113P63121 156 aa11.37□□□□□ -0.59
ABR-236ENST00000577052 SEC11AP67812 179 aa11.37□□□□□ -0.59
ABR-236ENST00000577052 SS18Q15532 418 aa11.37□□□□□ -0.59
ABR-236ENST00000577052 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
ABR-236ENST00000577052 CDKN2A-AS1Q9UH64 79 aa11.37□□□□□ -0.59
ABR-236ENST00000577052 IGLV5-52A0A0A0MRZ9 124 aa11.36□□□□□ -0.59
ABR-236ENST00000577052 IBA57-AS1B1ANH7 110 aa11.36□□□□□ -0.59
ABR-236ENST00000577052 FAM229AH3BQW9 127 aa11.36□□□□□ -0.59
ABR-236ENST00000577052 MIAQ16674 131 aa11.36□□□□□ -0.59
ABR-236ENST00000577052 ANKRD39Q53RE8 183 aa11.36□□□□□ -0.59
ABR-236ENST00000577052 TMEM170BQ5T4T1 132 aa11.36□□□□□ -0.59
ABR-236ENST00000577052 C10orf126Q8N4M7 172 aa11.36□□□□□ -0.59
ABR-236ENST00000577052 LINC00469Q8N7U9 141 aa11.36□□□□□ -0.59
ABR-236ENST00000577052 STPG4Q8N801 248 aa11.36□□□□□ -0.59
ABR-236ENST00000577052 VAMP8Q9BV40 100 aa11.36□□□□□ -0.59
ABR-236ENST00000577052 IGHV3OR16-9A0A0B4J2B5 98 aa11.35□□□□□ -0.59
ABR-236ENST00000577052 XCL1P47992 114 aa11.35□□□□□ -0.59
ABR-236ENST00000577052 PAM16Q9Y3D7 125 aa11.35□□□□□ -0.59
ABR-236ENST00000577052 LRP1Q07954 4544 aaKnown RBP11.35□□□□□ -0.59
ABR-236ENST00000577052 TMEM223A0PJW6 202 aa11.34□□□□□ -0.59
ABR-236ENST00000577052 WFDC2Q14508 124 aa11.34□□□□□ -0.59
ABR-236ENST00000577052 Q8N814 137 aa11.34□□□□□ -0.59
ABR-236ENST00000577052 TRAV8-4A0A0B4J246 113 aa11.33□□□□□ -0.6
ABR-236ENST00000577052 KRTAP26-1Q6PEX3 210 aa11.33□□□□□ -0.6
ABR-236ENST00000577052 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.6
ABR-236ENST00000577052 HSBP1L1C9JCN9 74 aa11.32□□□□□ -0.6
ABR-236ENST00000577052 SPINK8P0C7L1 97 aa11.32□□□□□ -0.6
ABR-236ENST00000577052 FOXI1Q12951 378 aa11.32□□□□□ -0.6
ABR-236ENST00000577052 SPATA45Q537H7 98 aa11.32□□□□□ -0.6
ABR-236ENST00000577052 NTN5Q8WTR8 489 aaPredicted RBP11.32□□□□□ -0.6
ABR-236ENST00000577052 Q9HAA7 133 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms