RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ESDP10768 282 aa6.13□□□□□ -1.43
NPLOC4-220ENST00000576940 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
NPLOC4-220ENST00000576940 PHF5AQ7RTV0 110 aaKnown RBP6.13□□□□□ -1.43
NPLOC4-220ENST00000576940 PACRGQ96M98 296 aaPredicted RBP6.13□□□□□ -1.43
NPLOC4-220ENST00000576940 A0A0U1RQV1 116 aa6.12□□□□□ -1.43
NPLOC4-220ENST00000576940 LINC00959A0A1B0GUT2 108 aa6.12□□□□□ -1.43
NPLOC4-220ENST00000576940 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
NPLOC4-220ENST00000576940 RIGQ13278 110 aa6.12□□□□□ -1.43
NPLOC4-220ENST00000576940 C9orf116Q5BN46 136 aaPredicted RBP6.12□□□□□ -1.43
NPLOC4-220ENST00000576940 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
NPLOC4-220ENST00000576940 OR5A1Q8NGJ0 315 aa6.12□□□□□ -1.43
NPLOC4-220ENST00000576940 PKIGQ9Y2B9 76 aa6.12□□□□□ -1.43
NPLOC4-220ENST00000576940 TRAPPC1Q9Y5R8 145 aa6.12□□□□□ -1.43
NPLOC4-220ENST00000576940 LOC107984640A0A0U1RRK4 108 aa6.11□□□□□ -1.43
NPLOC4-220ENST00000576940 S100A6P06703 90 aa6.11□□□□□ -1.43
NPLOC4-220ENST00000576940 RPL39LQ96EH5 51 aaKnown RBP6.11□□□□□ -1.43
NPLOC4-220ENST00000576940 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
NPLOC4-220ENST00000576940 IGLV4-69A0A075B6H9 119 aa6.1□□□□□ -1.43
NPLOC4-220ENST00000576940 H7C423 109 aa6.1□□□□□ -1.43
NPLOC4-220ENST00000576940 IGLV7-43P04211 117 aa6.1□□□□□ -1.43
NPLOC4-220ENST00000576940 CAMPP49913 170 aa6.1□□□□□ -1.43
NPLOC4-220ENST00000576940 FABP9Q0Z7S8 132 aa6.1□□□□□ -1.43
NPLOC4-220ENST00000576940 KRTAP11-1Q8IUC1 163 aa6.1□□□□□ -1.43
NPLOC4-220ENST00000576940 BORCS7Q96B45 105 aa6.1□□□□□ -1.43
NPLOC4-220ENST00000576940 TMEM191AQ9H0A3 160 aa6.1□□□□□ -1.43
NPLOC4-220ENST00000576940 MUC17Q685J3 4493 aa6.09□□□□□ -1.43
NPLOC4-220ENST00000576940 APCSP02743 223 aa6.09□□□□□ -1.43
NPLOC4-220ENST00000576940 TWIST1Q15672 202 aa6.09□□□□□ -1.43
NPLOC4-220ENST00000576940 MRPL54Q6P161 138 aaKnown RBP6.09□□□□□ -1.43
NPLOC4-220ENST00000576940 CD164L2Q6UWJ8 174 aa6.09□□□□□ -1.43
NPLOC4-220ENST00000576940 DIRC1Q969H9 104 aa6.09□□□□□ -1.43
NPLOC4-220ENST00000576940 OPRPNQ99935 248 aaPredicted RBP6.09□□□□□ -1.43
NPLOC4-220ENST00000576940 LAMTOR2Q9Y2Q5 125 aa6.09□□□□□ -1.43
NPLOC4-220ENST00000576940 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.08□□□□□ -1.44
NPLOC4-220ENST00000576940 NCR2O95944 276 aa6.08□□□□□ -1.44
NPLOC4-220ENST00000576940 PPBPP02775 128 aa6.08□□□□□ -1.44
NPLOC4-220ENST00000576940 SS18Q15532 418 aa6.08□□□□□ -1.44
NPLOC4-220ENST00000576940 HIST3H2BBQ8N257 126 aa6.08□□□□□ -1.44
NPLOC4-220ENST00000576940 TMEM101Q96IK0 257 aa6.08□□□□□ -1.44
NPLOC4-220ENST00000576940 ALKBH7Q9BT30 221 aaPredicted RBP6.08□□□□□ -1.44
NPLOC4-220ENST00000576940 A0A087WZ39 114 aa6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 SDHAF1A6NFY7 115 aa6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 H0Y9J4 135 aa6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 APOMO95445 188 aa6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 KRTAP1-4P0C5Y4 121 aa6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 ZNF25P17030 456 aaPredicted RBP6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 PMCHP20382 165 aa6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 RPL18AQ02543 176 aaKnown RBP6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 FAM104BQ5XKR9 115 aa6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 CAMK2N2Q96S95 79 aa6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 CDC42SE2Q9NRR3 84 aa6.07□□□□□ -1.44
NPLOC4-220ENST00000576940 IGLV1-50A0A075B6I6 118 aa6.06□□□□□ -1.44
NPLOC4-220ENST00000576940 PRSS47A8MTI9 375 aa6.06□□□□□ -1.44
NPLOC4-220ENST00000576940 MALP21145 153 aa6.06□□□□□ -1.44
NPLOC4-220ENST00000576940 C18orf32Q8TCD1 76 aa6.06□□□□□ -1.44
NPLOC4-220ENST00000576940 FAM168BA1KXE4 195 aa6.05□□□□□ -1.44
NPLOC4-220ENST00000576940 LINC01546A6NGU7 62 aa6.05□□□□□ -1.44
NPLOC4-220ENST00000576940 IFITM10A6NMD0 228 aa6.05□□□□□ -1.44
NPLOC4-220ENST00000576940 I3L3M4 83 aa6.05□□□□□ -1.44
NPLOC4-220ENST00000576940 SMIM6P0DI80 62 aa6.05□□□□□ -1.44
NPLOC4-220ENST00000576940 NDUFA6P56556 154 aa6.05□□□□□ -1.44
NPLOC4-220ENST00000576940 LINC00310P59036 64 aa6.05□□□□□ -1.44
NPLOC4-220ENST00000576940 CHCHD1Q96BP2 118 aaKnown RBP6.05□□□□□ -1.44
NPLOC4-220ENST00000576940 TSPAN13O95857 204 aa6.04□□□□□ -1.44
NPLOC4-220ENST00000576940 UBE2D1P51668 147 aa6.04□□□□□ -1.44
NPLOC4-220ENST00000576940 RPL32P62910 135 aaKnown RBP6.04□□□□□ -1.44
NPLOC4-220ENST00000576940 C5orf38Q86SI9 138 aa6.04□□□□□ -1.44
NPLOC4-220ENST00000576940 MRAP2Q96G30 205 aa6.04□□□□□ -1.44
NPLOC4-220ENST00000576940 HIST1H2BLQ99880 126 aa6.04□□□□□ -1.44
NPLOC4-220ENST00000576940 FSIP2Q5CZC0 6907 aa6.04□□□□□ -1.44
NPLOC4-220ENST00000576940 K7EMI3 77 aa6.03□□□□□ -1.44
NPLOC4-220ENST00000576940 COX7A2LO14548 114 aa6.03□□□□□ -1.44
NPLOC4-220ENST00000576940 PPP1R17O96001 155 aa6.03□□□□□ -1.44
NPLOC4-220ENST00000576940 TSHBP01222 138 aa6.03□□□□□ -1.44
NPLOC4-220ENST00000576940 RAB4AP20338 218 aa6.03□□□□□ -1.44
NPLOC4-220ENST00000576940 SMIM15Q7Z3B0 74 aa6.03□□□□□ -1.44
NPLOC4-220ENST00000576940 ORMDL3Q8N138 153 aa6.03□□□□□ -1.44
NPLOC4-220ENST00000576940 TMEM18Q96B42 140 aa6.03□□□□□ -1.44
NPLOC4-220ENST00000576940 C2orf48Q96LS8 159 aa6.03□□□□□ -1.44
NPLOC4-220ENST00000576940 SERF1AO75920 110 aa6.02□□□□□ -1.45
NPLOC4-220ENST00000576940 MRPL51Q4U2R6 128 aaKnown RBP6.02□□□□□ -1.45
NPLOC4-220ENST00000576940 RNASE13Q5GAN3 156 aaKnown RBP6.02□□□□□ -1.45
NPLOC4-220ENST00000576940 TRBV6-5A0A0K0K1A5 114 aa6.01□□□□□ -1.45
NPLOC4-220ENST00000576940 S100A2P29034 98 aa6.01□□□□□ -1.45
NPLOC4-220ENST00000576940 FAM19A5Q7Z5A7 132 aaPredicted RBP6.01□□□□□ -1.45
NPLOC4-220ENST00000576940 MRPL52Q86TS9 123 aaKnown RBP6.01□□□□□ -1.45
NPLOC4-220ENST00000576940 BAGE3Q86Y29 109 aa6.01□□□□□ -1.45
NPLOC4-220ENST00000576940 KRTAP7-1Q8IUC3 87 aa6.01□□□□□ -1.45
NPLOC4-220ENST00000576940 TRAV13-1A0A0B4J241 112 aa6□□□□□ -1.45
NPLOC4-220ENST00000576940 RPL13AP40429 203 aaKnown RBP6□□□□□ -1.45
NPLOC4-220ENST00000576940 POLR2KP53803 58 aaKnown RBP6□□□□□ -1.45
NPLOC4-220ENST00000576940 SPAG11BQ08648 103 aa6□□□□□ -1.45
NPLOC4-220ENST00000576940 RNF151Q2KHN1 245 aa6□□□□□ -1.45
NPLOC4-220ENST00000576940 KIAA1644Q3SXP7 199 aa6□□□□□ -1.45
NPLOC4-220ENST00000576940 C10orf25Q5T742 122 aa6□□□□□ -1.45
NPLOC4-220ENST00000576940 AMN1Q8IY45 258 aa6□□□□□ -1.45
NPLOC4-220ENST00000576940 LINC00518Q8N0U6 118 aa6□□□□□ -1.45
NPLOC4-220ENST00000576940 URB1-AS1Q96HZ7 61 aa6□□□□□ -1.45
NPLOC4-220ENST00000576940 PRELID3AQ96N28 172 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms