RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 A0A1B0GX51 115 aa10.46□□□□□ -0.73
SCARF1-209ENST00000576012 RBMY1BA6NDE4 496 aaKnown RBP10.46□□□□□ -0.73
SCARF1-209ENST00000576012 RBMY1EA6NEQ0 496 aaKnown RBP10.46□□□□□ -0.73
SCARF1-209ENST00000576012 RBMY1DP0C7P1 496 aaKnown RBP10.46□□□□□ -0.73
SCARF1-209ENST00000576012 DEFB121Q5J5C9 76 aa10.46□□□□□ -0.73
SCARF1-209ENST00000576012 HIST1H4AP62805 103 aaKnown RBP10.45□□□□□ -0.74
SCARF1-209ENST00000576012 WFDC9Q8NEX5 89 aa10.45□□□□□ -0.74
SCARF1-209ENST00000576012 IGHV4-30-2A0A087WSY4 118 aa10.45□□□□□ -0.74
SCARF1-209ENST00000576012 A0A087WYN8 130 aa10.45□□□□□ -0.74
SCARF1-209ENST00000576012 K7EMT4 169 aa10.45□□□□□ -0.74
SCARF1-209ENST00000576012 NCR3O14931 201 aa10.45□□□□□ -0.74
SCARF1-209ENST00000576012 LINC00158P58513 81 aa10.45□□□□□ -0.74
SCARF1-209ENST00000576012 SMIM1B2RUZ4 78 aa10.44□□□□□ -0.74
SCARF1-209ENST00000576012 MIR7-3HGQ8N6C7 128 aa10.44□□□□□ -0.74
SCARF1-209ENST00000576012 C11orf44Q8N8P7 122 aa10.44□□□□□ -0.74
SCARF1-209ENST00000576012 ACYP1P07311 99 aa10.44□□□□□ -0.74
SCARF1-209ENST00000576012 DSCR8Q96T75 97 aa10.44□□□□□ -0.74
SCARF1-209ENST00000576012 PEMTQ9UBM1 199 aa10.44□□□□□ -0.74
SCARF1-209ENST00000576012 C22orf24Q9Y442 160 aa10.44□□□□□ -0.74
SCARF1-209ENST00000576012 MALP21145 153 aa10.43□□□□□ -0.74
SCARF1-209ENST00000576012 CRPP02741 224 aa10.43□□□□□ -0.74
SCARF1-209ENST00000576012 PSMB8P28062 276 aa10.43□□□□□ -0.74
SCARF1-209ENST00000576012 DEFB112Q30KQ8 113 aa10.43□□□□□ -0.74
SCARF1-209ENST00000576012 PKIGQ9Y2B9 76 aa10.43□□□□□ -0.74
SCARF1-209ENST00000576012 ZNF415Q09FC8 603 aa10.42□□□□□ -0.74
SCARF1-209ENST00000576012 HRCT1Q6UXD1 115 aa10.42□□□□□ -0.74
SCARF1-209ENST00000576012 LINC00337Q8N6G1 96 aa10.42□□□□□ -0.74
SCARF1-209ENST00000576012 LINC00526Q96FQ7 95 aa10.42□□□□□ -0.74
SCARF1-209ENST00000576012 LINC01600Q96MT4 127 aa10.42□□□□□ -0.74
SCARF1-209ENST00000576012 V9GYY9 64 aa10.42□□□□□ -0.74
SCARF1-209ENST00000576012 USP24Q9UPU5 2620 aa10.42□□□□□ -0.74
SCARF1-209ENST00000576012 LECT2O14960 151 aa10.41□□□□□ -0.74
SCARF1-209ENST00000576012 PRB1P04280 392 aa10.41□□□□□ -0.74
SCARF1-209ENST00000576012 COX7CP15954 63 aa10.41□□□□□ -0.74
SCARF1-209ENST00000576012 Q96MF0 132 aa10.41□□□□□ -0.74
SCARF1-209ENST00000576012 NBEAL2Q6ZNJ1 2754 aa10.41□□□□□ -0.74
SCARF1-209ENST00000576012 H3BUA1 57 aa10.41□□□□□ -0.74
SCARF1-209ENST00000576012 CCL19Q99731 98 aa10.41□□□□□ -0.74
SCARF1-209ENST00000576012 SND1-IT1Q9HBX3 110 aa10.41□□□□□ -0.74
SCARF1-209ENST00000576012 LINC00846Q9NV44 126 aa10.41□□□□□ -0.74
SCARF1-209ENST00000576012 RNF152Q8N8N0 203 aa10.4□□□□□ -0.74
SCARF1-209ENST00000576012 RPL35AP18077 110 aaKnown RBP10.4□□□□□ -0.74
SCARF1-209ENST00000576012 IMUPQ9GZP8 106 aa10.4□□□□□ -0.74
SCARF1-209ENST00000576012 PAX4O43316 350 aa10.39□□□□□ -0.75
SCARF1-209ENST00000576012 TIMM17BO60830 172 aa10.39□□□□□ -0.75
SCARF1-209ENST00000576012 BEAN1Q3B7T3 259 aa10.39□□□□□ -0.75
SCARF1-209ENST00000576012 HIST2H2BCQ6DN03 193 aa10.39□□□□□ -0.75
SCARF1-209ENST00000576012 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
SCARF1-209ENST00000576012 HIVEP2P31629 2446 aa10.39□□□□□ -0.75
SCARF1-209ENST00000576012 LOC100131303A0A0U1RQF7 123 aa10.38□□□□□ -0.75
SCARF1-209ENST00000576012 HILS1P60008 231 aa10.38□□□□□ -0.75
SCARF1-209ENST00000576012 RPL36AP83881 106 aaKnown RBP10.38□□□□□ -0.75
SCARF1-209ENST00000576012 C4orf26Q17RF5 130 aa10.38□□□□□ -0.75
SCARF1-209ENST00000576012 RPL36ALQ969Q0 106 aaKnown RBP10.38□□□□□ -0.75
SCARF1-209ENST00000576012 TRACP01848 142 aa10.38□□□□□ -0.75
SCARF1-209ENST00000576012 INAFM2P0DMQ5 153 aa10.38□□□□□ -0.75
SCARF1-209ENST00000576012 MSMBP08118 114 aa10.38□□□□□ -0.75
SCARF1-209ENST00000576012 NTM-AS1Q6ZSK4 140 aa10.38□□□□□ -0.75
SCARF1-209ENST00000576012 Q6ZTI0 123 aa10.38□□□□□ -0.75
SCARF1-209ENST00000576012 C5orf38Q86SI9 138 aa10.38□□□□□ -0.75
SCARF1-209ENST00000576012 UBE2L6O14933 153 aa10.37□□□□□ -0.75
SCARF1-209ENST00000576012 PLA2G2AP14555 144 aa10.37□□□□□ -0.75
SCARF1-209ENST00000576012 C2orf48Q96LS8 159 aa10.36□□□□□ -0.75
SCARF1-209ENST00000576012 IGLV5-39A0A0G2JS06 123 aa10.36□□□□□ -0.75
SCARF1-209ENST00000576012 DYNLRB2Q8TF09 96 aa10.36□□□□□ -0.75
SCARF1-209ENST00000576012 IGKV2-28A0A075B6P5 120 aa10.35□□□□□ -0.75
SCARF1-209ENST00000576012 IGKV2D-28P01615 120 aa10.35□□□□□ -0.75
SCARF1-209ENST00000576012 PRR3P79522 188 aaKnown RBP10.35□□□□□ -0.75
SCARF1-209ENST00000576012 TRAV23DV6A0A075B6W5 121 aa10.34□□□□□ -0.75
SCARF1-209ENST00000576012 ATOX1O00244 68 aa10.34□□□□□ -0.75
SCARF1-209ENST00000576012 CXCL5P42830 114 aa10.34□□□□□ -0.75
SCARF1-209ENST00000576012 CLPSL2Q6UWE3 100 aa10.34□□□□□ -0.75
SCARF1-209ENST00000576012 FLNAP21333 2647 aaKnown RBP10.34□□□□□ -0.75
SCARF1-209ENST00000576012 C11orf72Q8NBR9 251 aa10.33□□□□□ -0.76
SCARF1-209ENST00000576012 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
SCARF1-209ENST00000576012 RPL18AQ02543 176 aaKnown RBP10.33□□□□□ -0.76
SCARF1-209ENST00000576012 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
SCARF1-209ENST00000576012 C10orf105Q8TEF2 133 aa10.32□□□□□ -0.76
SCARF1-209ENST00000576012 TRAV13-2A0A0B4J235 113 aa10.32□□□□□ -0.76
SCARF1-209ENST00000576012 USP17L23D6RBM5 183 aa10.32□□□□□ -0.76
SCARF1-209ENST00000576012 CCL18P55774 89 aa10.32□□□□□ -0.76
SCARF1-209ENST00000576012 MAP6D1Q9H9H5 199 aa10.32□□□□□ -0.76
SCARF1-209ENST00000576012 CDC42SE2Q9NRR3 84 aa10.32□□□□□ -0.76
SCARF1-209ENST00000576012 PRO0628Q9UI54 55 aa10.31□□□□□ -0.76
SCARF1-209ENST00000576012 INSP01308 110 aa10.31□□□□□ -0.76
SCARF1-209ENST00000576012 LINC01561Q8N1V8 128 aa10.31□□□□□ -0.76
SCARF1-209ENST00000576012 COX7B2Q8TF08 81 aa10.31□□□□□ -0.76
SCARF1-209ENST00000576012 COPS9Q8WXC6 57 aa10.31□□□□□ -0.76
SCARF1-209ENST00000576012 TRGV2A0A075B6R0 118 aa10.3□□□□□ -0.76
SCARF1-209ENST00000576012 TMEM89A2RUT3 159 aa10.3□□□□□ -0.76
SCARF1-209ENST00000576012 AKAP9Q99996 3911 aa10.3□□□□□ -0.76
SCARF1-209ENST00000576012 FAM19A1Q7Z5A9 133 aa10.29□□□□□ -0.76
SCARF1-209ENST00000576012 OXTP01178 125 aa10.29□□□□□ -0.76
SCARF1-209ENST00000576012 RPL28P46779 137 aaKnown RBP10.29□□□□□ -0.76
SCARF1-209ENST00000576012 BBC3Q96PG8 261 aaPredicted RBP10.29□□□□□ -0.76
SCARF1-209ENST00000576012 IGLV4-60A0A075B6I1 120 aa10.28□□□□□ -0.76
SCARF1-209ENST00000576012 CRYGAP11844 174 aa10.28□□□□□ -0.76
SCARF1-209ENST00000576012 GCN1Q92616 2671 aaKnown RBP10.28□□□□□ -0.76
SCARF1-209ENST00000576012 STHQ8IWL8 128 aa10.28□□□□□ -0.76
SCARF1-209ENST00000576012 ZNF469Q96JG9 3925 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms